EY661007

Overview
NameEY661007
Unique NameEY661007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig472 contig Csv1_Contig472:454..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY661007 vs. ExPASy Swiss-Prot
Match: PX11D_ARATH (Peroxisomal membrane protein 11D OS=Arabidopsis thaliana GN=PEX11D PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.966e-48
Identity = 96/128 (75.00%), Postives = 106/128 (82.81%), Query Frame = 3
Query:   12 GRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP 395
            GRSGIYKNKERAELLGRISLFCWMGSSVC+TLVE+GE+GRLS+SM              +E Y+AKLKKSNERSLAL+KSAMDIVVA GLLQLAP K+TPRVTGAFGF+TS+ISCYQLLP   K K P
Sbjct:  109 GRSGIYKNKERAELLGRISLFCWMGSSVCTTLVEVGEMGRLSSSMKKIEKGLKNGNKYQDEDYRAKLKKSNERSLALIKSAMDIVVAAGLLQLAPTKITPRVTGAFGFITSIISCYQLLPTRPKIKTP 236          
BLAST of EY661007 vs. ExPASy Swiss-Prot
Match: PX11C_ARATH (Peroxisomal membrane protein 11C OS=Arabidopsis thaliana GN=PEX11C PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.350e-45
Identity = 90/126 (71.43%), Postives = 106/126 (84.13%), Query Frame = 3
Query:   12 GRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 389
            GR+GIYK+KERAE+LGRISLFCWMGSSVC++LVE+GELGRLS S+              NEQY+AK++KSNERSLAL+K+ MD+VVA GLLQLAPKKVTPRVTGAFGF +SLISCYQLLP+  K+K
Sbjct:  108 GRTGIYKDKERAEILGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKVEKSNERSLALIKAGMDVVVAFGLLQLAPKKVTPRVTGAFGFASSLISCYQLLPSHPKSK 233          
BLAST of EY661007 vs. ExPASy Swiss-Prot
Match: PX11E_ARATH (Peroxisomal membrane protein 11E OS=Arabidopsis thaliana GN=PEX11E PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.684e-43
Identity = 88/128 (68.75%), Postives = 105/128 (82.03%), Query Frame = 3
Query:   12 GRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP 395
            GRSGIYKNKER ELLGRISLFCW+GSSVC++ VE+GELGRLS+SM              +E Y+AKL+KSN+R+LAL+KS+MDI+VA+GLLQLAPK ++PRVTGAFGF TSLISCYQLLP+  K K P
Sbjct:  108 GRSGIYKNKERTELLGRISLFCWLGSSVCTSAVEIGELGRLSSSMKKMEKELKAD----DELYRAKLQKSNDRTLALIKSSMDIIVAIGLLQLAPKTISPRVTGAFGFTTSLISCYQLLPSRPKLKTP 231          
BLAST of EY661007 vs. ExPASy Swiss-Prot
Match: PX115_ORYSJ (Peroxisomal membrane protein 11-5 OS=Oryza sativa subsp. japonica GN=PEX11-5 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.334e-40
Identity = 80/126 (63.49%), Postives = 100/126 (79.37%), Query Frame = 3
Query:   12 GRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 389
            GR+GIYKNKERAE L +I+ +C++GS+ C++++E+ EL RLS SM              NEQYQ KL+K NER LAL+KS++DIVVA+GLLQLAPKKVTPRVTGAFGF +SLI+CYQLLPAP K+K
Sbjct:  108 GRTGIYKNKERAEFLSKIAFYCFLGSNTCTSIIEVAELQRLSKSMKKLEKELKHQELLKNEQYQMKLQKCNERRLALIKSSLDIVVAIGLLQLAPKKVTPRVTGAFGFASSLIACYQLLPAPAKSK 233          
BLAST of EY661007 vs. ExPASy Swiss-Prot
Match: PX111_ORYSJ (Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica GN=PEX11-1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.973e-40
Identity = 85/130 (65.38%), Postives = 102/130 (78.46%), Query Frame = 3
Query:   12 GRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPA---PVKAKA 392
            GR+GIYKNKER + + RISL+CWM SSVC+ LVELGEL RLS SM              N+QY++K+K+S+ER LALVK+AMD+VVAVGLLQL+PKK+TPRVTGAFGFVTSLISCYQ LP+    +K KA
Sbjct:  108 GRTGIYKNKERTDRIVRISLYCWMASSVCAGLVELGELKRLSKSMRKLARELRDTDKYENDQYKSKMKQSDERLLALVKAAMDVVVAVGLLQLSPKKITPRVTGAFGFVTSLISCYQQLPSRAPAIKVKA 237          
The following BLAST results are available for this feature:
BLAST of EY661007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PX11D_ARATH2.966e-4875.00Peroxisomal membrane protein 11D OS=Arabidopsis th... [more]
PX11C_ARATH2.350e-4571.43Peroxisomal membrane protein 11C OS=Arabidopsis th... [more]
PX11E_ARATH1.684e-4368.75Peroxisomal membrane protein 11E OS=Arabidopsis th... [more]
PX115_ORYSJ1.334e-4063.49Peroxisomal membrane protein 11-5 OS=Oryza sativa ... [more]
PX111_ORYSJ2.973e-4065.38Peroxisomal membrane protein 11-1 OS=Oryza sativa ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661007 ID=EY661007; Name=EY661007; organism=Citrus sinensis; type=EST; length=610bp
CCACGCGTCCGGGCAGATCAGGCATCTACAAGAACAAAGAGCGTGCAGAA
TTGCTTGGTCGGATATCTCTTTTTTGTTGGATGGGTTCCTCAGTTTGTAG
CACATTAGTTGAGCTTGGAGAGCTTGGGAGGCTTTCTACATCAATGAAAA
AGTTAGAGAAGGAGCTTAAGGACAGTGATAAGCATAAAAATGAACAATAC
CAAGCTAAACTTAAAAAATCAAATGAGAGGTCTCTAGCACTTGTCAAATC
AGCCATGGACATTGTGGTGGCGGTTGGGCTGCTTCAATTGGCCCCCAAGA
AAGTTACTCCTCGTGTAACAGGAGCATTTGGATTTGTTACCTCTCTCATC
TCTTGTTATCAGCTACTTCCAGCTCCAGTAAAAGCCAAGGCACCATGAAT
GGAAAAGGCGGCTTTGCTGCACAAGCTTCAGTGACATTAAAATAATTATT
CGTAGTGGTTACATAAGTCAGATGTTGGTGTATGCTTTTGCTCAATTCGC
CACCTTATAAGGTGACATTAAAATATTCCACTTGTTGTCAAGATCACTCT
GCTCTTTTAAAGTAGTAATAATACCCCTGGCTTGTCTTTTCAAAAAAAAA
AAAAAAAAAA
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