EY660963

Overview
NameEY660963
Unique NameEY660963
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660963 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.642e-21
Identity = 55/76 (72.37%), Postives = 57/76 (75.00%), Query Frame = 2
Query:    2 FTARAIIMAAAPDPYXXXXXXXXXXXXXXXASVTAPVYIAEASPSEVRGGLVSTNVLMITSGQFLSYLVNLAFTEV 229
            F A AI+MAAAPDPY               ASVTAPVYIAEASPSEVRGGLVSTNVLMIT GQFLSYLVN AFT+V
Sbjct:  111 FAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAPVYIAEASPSEVRGGLVSTNVLMITGGQFLSYLVNSAFTQV 186          
BLAST of EY660963 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.659e-15
Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 2
Query:    2 FTARAIIMAAAPDPYXXXXXXXXXXXXXXXASVTAPVYIAEASPSEVRGGLVSTNVLMITSGQFLSYLVNLAFTEVRFT 238
            F   AIIMAAAP+P                AS+TAP+YI+EASP+++RG LVSTN  +IT GQFLSYL+NLAFT+V  T
Sbjct:  108 FLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPAKIRGALVSTNGFLITGGQFLSYLINLAFTDVTGT 186          
BLAST of EY660963 vs. ExPASy Swiss-Prot
Match: INT4_ARATH (Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 2
Query:    2 FTARAIIMAAAPDPYXXXXXXXXXXXXXXXASVTAPVYIAEASPSEVRGGLVSTNVLMITSGQFLSYLVNLAF 220
            F   AI+MA AP P+               AS+T+P+YI+EASP+ +RG LVSTN L+IT GQF SYL+NLAF
Sbjct:  107 FLIGAIVMAFAPAPWVIIVGRIFVGFGVGMASMTSPLYISEASPARIRGALVSTNGLLITGGQFFSYLINLAF 179          
BLAST of EY660963 vs. ExPASy Swiss-Prot
Match: INT3_ARATH (Probable inositol transporter 3 OS=Arabidopsis thaliana GN=INT3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 2
Query:    2 FTARAIIMAAAPDPYXXXXXXXXXXXXXXXASVTAPVYIAEASPSEVRGGLVSTNVLMITSGQFLSYLVNLAF 220
            F   A++M  A  P+               AS+T+P+YI+E SP+ +RG LVSTN L+IT GQFLSYL+NLAF
Sbjct:  106 FLLGALVMVIAHAPWVIILGRLLVGFGVGMASMTSPLYISEMSPARIRGALVSTNGLLITGGQFLSYLINLAF 178          
The following BLAST results are available for this feature:
BLAST of EY660963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
INT1_ARATH2.642e-2172.37Probable inositol transporter 1 OS=Arabidopsis tha... [more]
INT2_ARATH1.659e-1555.70Probable inositol transporter 2 OS=Arabidopsis tha... [more]
INT4_ARATH5.900e-1352.05Inositol transporter 4 OS=Arabidopsis thaliana GN=... [more]
INT3_ARATH3.237e-1147.95Probable inositol transporter 3 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-027-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660963 ID=EY660963; Name=EY660963; organism=Citrus sinensis; type=EST; length=881bp
CTTTACTGCCCGAGCCATTATAATGGCTGCTGCTCCAGATCCATATGTTC
TCATACTGGGACGGCTTCTAGTTGGCCTGGGAGTAGGCATAGCATCTGTT
ACTGCTCCGGTATATATCGCTGAAGCATCCCCATCAGAAGTAAGGGGTGG
ACTAGTGAGCACAAATGTACTTATGATAACCAGTGGACAGTTTCTTTCCT
ACCTCGTAAATCTTGCTTTTACGGAGGTCAGATTTACCTAGCTTAACTGT
TTGCTTTGCTTTCATAAACTTGCGATACTTGTGTCCTGTGTAACATGGTA
GTAAGTAATAAAAACTTTTGTGAGATTTGGGTCTCTGGTTTAGCTATAGA
TCAGAAGATGAAAAGATGGATTTACCTTCTATTCTTATACATATATTGGT
CTTGCTTTTAAGAAGTTCCATTGAAAAGCTATAGTGAATTGCATTTTTTC
AAGAGAGAAGGTCTTATAAAAATAAACTTAAACCGGTATCTAAGGCATAT
TGGGACAAATATTCGTTTAAATGGTCTATTCGTGGGCCCTTCCCACTTTC
TTGAAACCTCCTTTTGTAGTTCTAGATGGAAATTATTTTGTACTCTTTAG
TTAAACAATAGAATTGTGAAAGGTCGTAAATATCTAATGGTGAATAAATT
AGTTTATGTGGTGAATAAGAAGTTTATCTTTTTCTTCTTTGGAGTTTCTT
CCTTAAACTCAGTAGTTAAAGGATTACCCTTTTCATGAAGTAAATCAGTT
GGCTTTTAAGTGATGATTTGCTATGACGATTGTACTTCTATTTTACAAAA
AGTTCCTGCAGGAAAATTGCATATCCTTGCTCCTATAATCTCAGCTGGTG
GAAAGGTTCTCTTCGCAGTTTGGAGAGCACC
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