EY660760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660760 vs. ExPASy Swiss-Prot
Match: PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 5.178e-52 Identity = 88/143 (61.54%), Postives = 113/143 (79.02%), Query Frame = 2 Query: 323 MGVKTM-FKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKEFGCEPTPKSYITVLAILVEEIS*SLRLGF 748 MG K M FKWS IT +QV++L+RAEKDV K++ +FDSATAEYANG+ HD S+F M+ +LVSAN+F+ AEDL+ R+ E C ++EDI LSICRGYGRVHRP D++RVF KMK+F C+P+ K+Y+TVLAILVEE +L F Sbjct: 1 MGSKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKF 143 HSP 2 Score: 35.8094 bits (81), Expect = 5.178e-52 Identity = 19/37 (51.35%), Postives = 23/37 (62.16%), Query Frame = 1 Query: 721 DQLKLAFRFYRHMREIWYSPCXASPLCLIKLYVRTVG 831 +QL LAF+FY++MREI P AS LIK R G Sbjct: 135 NQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDG 171 HSP 3 Score: 29.261 bits (64), Expect = 5.178e-52 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 807 QALCKNSGTMDAAFKIFV 860 +ALC+N GT+DA KIF+ Sbjct: 164 KALCRNDGTVDAGLKIFL 181
BLAST of EY660760 vs. ExPASy Swiss-Prot
Match: PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.954e-12 Identity = 39/128 (30.47%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 338 MFKWSTKITSAQVLQLIRAEKDVNKALVIFDSATAEYANGFRHDNSTFSLMISKLVSANQFRPAEDLLDRVNKEKCDITEDIFLSICRGYGRVHRPLDAMRVFDKMKE-FGCEPTPKSYITVLAILVE 718 M + ++ VL+L+++EK+ A +FDSAT G+ H + ++ +L +++ + ++C ED+ LS+ + YG+ P A+ VF +M+E FGCEP +SY T+L VE Sbjct: 1 MVVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRH--PGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126 The following BLAST results are available for this feature:
BLAST of EY660760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660760 ID=EY660760; Name=EY660760; organism=Citrus sinensis; type=EST; length=899bpback to top |