EY660741

Overview
NameEY660741
Unique NameEY660741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660741 vs. ExPASy Swiss-Prot
Match: DGP10_ARATH (Protease Do-like 10, mitochondrial OS=Arabidopsis thaliana GN=DEGP10 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 37/45 (82.22%), Postives = 43/45 (95.56%), Query Frame = 1 
Query:  322 VAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLRPVR 456
            V FRNRERITFDHLVSMKKP+E +LV+VLR+GKEHEFSITLRP++
Sbjct:  377 VPFRNRERITFDHLVSMKKPDETALVKVLREGKEHEFSITLRPLQ 421

HSP 2 Score: 58.9214 bits (141), Expect = 7.206e-11
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  699 IPLTQPYLH*YGEDWYYTFPRRLCERALRELP 794
            +PLTQPYLH YGEDWY T PR LC RAL++LP
Sbjct:  444 VPLTQPYLHEYGEDWYNTSPRTLCHRALKDLP 475

HSP 3 Score: 29.261 bits (64), Expect = 7.206e-11
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 1 
Query:  655 FDKLPNYYIFAGLVLFHL 708
            FD+LP+YYIFAG V   L
Sbjct:  429 FDQLPSYYIFAGFVFVPL 446
The following BLAST results are available for this feature:
BLAST of EY660741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DGP10_ARATH2.490e-1482.22Protease Do-like 10, mitochondrial OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-025-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660741 ID=EY660741; Name=EY660741; organism=Citrus sinensis; type=EST; length=902bp
CCACGCGTCCGCTCATGTATATATACTTTAAGGATTAAATCTTCAATAGA
TTTTTATCTCTTAATACTTTATGAAAAATAAGCCAATCTATTTCTTTTAA
TATCATTTTAAGAACTTGGAAGAGAATCTTGGGGATAAATCTCTCGAGTT
CATAAAGAAATGAATAGGGGGAAAGAAAGAAAAACCACTGGATTTTCATG
AAAAGAAAAATCAAATAATAGTAACGTTGCTGTTTCCTATTTTTCTCCCT
CTTGATGGTGCTGTTGTTGATATCCATGGTTCCTTTATGTTCTTATTTGT
AGTGTGACTTAAATTATTGCAGTTGCTTTTCGTAACAGAGAACGTATAAC
ATTTGATCACTTGGTGTCTATGAAGAAACCCAACGAGAAGTCTTTGGTTA
GAGTTTTGAGGGATGGCAAGGAGCATGAATTCAGTATTACACTACGACCT
GTAAGAAATGGTTTTAGTCTCTTATAATGCTTGAAATTTTTATGATATAT
CTCTCAGGCAAATTCATTTTTGTAGAATCCTCTCAACTGAGAAAATTCCT
CATTCTTGAATGTGATGGAAACAGCTGACAGNTTTGNTCTGTCTCTTTCT
TACTCCCATTCTTTGTTAATTTTACAGCTGCAACCGCTAGTTCCCGTACA
TCATTTCGATAAGCTTCCTAACTATTACATATTTGCTGGGCTGGTGTTAT
TCCACTTACACAGCCATATCTTCATTGATATGGAGAAGACTGGTATTATA
CTTTCCCACGTCGTTTGTGCGAACGTGCATTAAGGGAGCTGCCCTAAAGG
CTGGTGAACAACCGTTATCCTTTCCCAGGGGCTATGGATGATTAAAGGCG
GGATAAAACGGTTTGCAACCTACAGGTTATAAAGGCATTGGGTGGAAATT
GA
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