EY660739

Overview
NameEY660739
Unique NameEY660739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660739 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.385e-62
Identity = 133/271 (49.08%), Postives = 166/271 (61.25%), Query Frame = 1
Query:   46 ESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTXVGLQAILDGCPHLESLDLRQCFNVNLXGKLGKICAERIRDYDIP*LYHDYDSVQIFRILXSSVEITIWYSDIEL 858
            ES +WT+LP ++TS IL ++GAI++L +AQ+VC SW R+C DP+MWR IDMHNLGDL DMD++LE MCRHAVDRS G L+ I I YFGT +LL YIA           + C  I+D GF EA+   P              E+L  VG  C  +++ KLN      P+ E DDDA AIAE M  LRHLQL GN L+  GL AILD C +LE LDLR+CFNVNL G L K C E ++      + H  DS+    I  S  E    +SDI+L
Sbjct:   15 ESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLPLEELELSYCSFSV-ESLRVVGQCCLNMKTLKLNKH----PQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKV-----VRHPNDSIHDIDIGSSEDEDPYDFSDIDL 275          
BLAST of EY660739 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.771e-60
Identity = 119/243 (48.97%), Postives = 154/243 (63.37%), Query Frame = 1
Query:   55 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKI-----ECDDDAKAIAENMHGLRHLQLFGNELTXVGLQAILDGCPHLESLDLRQCFNVNLXGKLGKICAERIRDYDIP 768
            +W +LP+ +TS+IL ++GAI++L +AQ+VC  W R+C DP+MWR ID+ N  D     +DLE MCRHAVDRS+G L+ I I Y+GT++L+ YIA           V C+ I+D+G  +A+   P              E+L  +G  CP L++ KLN    R P+I       DD+AKAIAE+M  LRHLQL GN LT  GL AILDGCPHLE LDLRQCFN+NL G L K C ERI+D   P
Sbjct:  180 NWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLN----RAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLRCP 418          

HSP 2 Score: 87.8113 bits (216), Expect = 8.796e-17
Identity = 44/70 (62.86%), Postives = 51/70 (72.86%), Query Frame = 1
Query:  559 DDDAKAIAENMHGLRHLQLFGNELTXVGLQAILDGCPHLESLDLRQCFNVNLXGKLGKICAERIRDYDIP 768
            DD+  AIAE M  LRHL+LFGN LT + L+AILD C HL  LDLR+CFN+NL G L K C+ERIRD   P
Sbjct:   19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIRDLRRP 88          
BLAST of EY660739 vs. ExPASy Swiss-Prot
Match: FB221_ARATH (Putative F-box protein At4g05480 OS=Arabidopsis thaliana GN=At4g05480 PE=4 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.029e-49
Identity = 108/254 (42.52%), Postives = 146/254 (57.48%), Query Frame = 1
Query:   40 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRC----------PKIECDDDAKAIAENMHGLRHLQLFGNELTXVGLQAILDGCPHLES-LDLRQCFNVNLXGKLGKICAERIRDYDIP 768
            ++E  +W  LP ++T++IL ++   D+L +A+++C +W RIC DP+MWR I   NL D    + D E MCRH VD S G LL INIE+F +D LL YI                 ++++G    I+  P              + L+A+G  CP L++ KLN+ G             P +ECDDDA AIAE+M  LRHLQL GN LT  GL AILDGCPHLE  LD+R+CFN+NL G L K C +RI++   P
Sbjct:   34 DEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKI---NLRDCLMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKELRRP 283          
BLAST of EY660739 vs. ExPASy Swiss-Prot
Match: FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana GN=FBL22 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.391e-46
Identity = 106/253 (41.90%), Postives = 143/253 (56.52%), Query Frame = 1
Query:   16 SRMSTGTAEQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEY--FGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTXVGLQAILDGCPHLESLDLRQCFNVNLXGKLGKICAERIRDYDIP 768
            S++     E++  +W +LP D+ S+IL ++  +++L +A++VC SW R+  DP +WR IDM NL  L+ + + +E  CRH VD S G LL  NI+   F T  LL Y+A           V    I+  G  EAI   P             +E  + +G  CP L++ KL   G      E D+DA AIA+ M GL HLQL  N LT +GL AILDGCPHLE LDLRQCFN+NL G L + C ERI+D+  P
Sbjct:   13 SQLPVMKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCI-YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLV--GFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDFRCP 261          
BLAST of EY660739 vs. ExPASy Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=4 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.427e-45
Identity = 101/231 (43.72%), Postives = 134/231 (58.01%), Query Frame = 1
Query:   55 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMH---NLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEA-LEAVGSLCPLLRSFKLNNRGH-RCPKIECDDDAKAIAENMHGLRHLQLFGNELTXVGLQAILDGCPHLESLDLRQCFNVNLXGKLGK 732
            +W +LP ++TS+IL ++GAI++L +AQRVC SW R+C DP+MWR ID+    NL +  ++ + +E +C  AVD S G LL INI+Y      L YIA           V C  +  +G  EA    P             +E  L+ VG  CP LR+ KLN  G  +C    CD  A AIAE M GLRHLQLF N L+  GL AIL+GCPHL++L L QC N+N+ G + K
Sbjct:   20 NWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKC----CDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246          
BLAST of EY660739 vs. ExPASy Swiss-Prot
Match: FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana GN=FBL21 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.221e-44
Identity = 105/258 (40.70%), Postives = 138/258 (53.49%), Query Frame = 1
Query:   43 QESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINI-EYFGTDELLQYIAXXXXXXXXXXXVSCY-NISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPK--------------IECDDDAKAIAENMHGLRHLQLFGNELTXVGLQAILDGCPHLESLDLRQCFNVNLXGKLGKICAERIRDYDIP 768
            +E  +W  LP ++T++IL ++   D+L +AQ+VC  W RIC DP+MWR I   N  D    + D   MCRH VD S G LL IN+ E+F +D LL YI              C+  ++  G   AI   P              + L+A+G  CP L++ KLN+ G   P               +ECDDDA AIAE+M  L HLQL  N LT  GL AILDGCPHLE LD+R+CF ++L G L K C E I++   P
Sbjct:   41 KERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI---NTRDCLMYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGM--CFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLD-LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELRRP 292          
BLAST of EY660739 vs. ExPASy Swiss-Prot
Match: SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 67/248 (27.02%), Postives = 107/248 (43.15%), Query Frame = 1
Query:   40 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGD-------LW--DMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCE-AIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLN----NRGH----------RCPKIECDDDAKAIAENMHGLRHLQLFGNELTXVGLQAILDGCPHLESLDLRQCFNVN 711
            E++  DW  L  ++   I+S++   ++ T    V  SWL +C DP +W   D+    D       LW  + +  ++ M R  VD S G L  I + +  +D  L Y A            S  N++D    + A +                 + L  +G  CP LR  K N    +  H           CP+ + D +A AI ++M  L HL++  + L+  GL +I +GCP LE LDL  C +++
Sbjct:    2 EEDGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQ-DGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCVHLS 247          
The following BLAST results are available for this feature:
BLAST of EY660739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SKI19_ARATH1.385e-6249.08F-box protein SKIP19 OS=Arabidopsis thaliana GN=SK... [more]
FBL23_ARATH3.771e-6048.97Putative F-box/LRR-repeat protein 23 OS=Arabidopsi... [more]
FB221_ARATH1.029e-4942.52Putative F-box protein At4g05480 OS=Arabidopsis th... [more]
FBL22_ARATH1.391e-4641.90Putative F-box/LRR-repeat protein 22 OS=Arabidopsi... [more]
FBL9_ARATH3.427e-4543.72Putative F-box/LRR-repeat protein 9 OS=Arabidopsis... [more]
FBL21_ARATH2.221e-4440.70Putative F-box/LRR-repeat protein 21 OS=Arabidopsi... [more]
SKIP1_ARATH5.701e-1627.02F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKI... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-025-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660739 ID=EY660739; Name=EY660739; organism=Citrus sinensis; type=EST; length=881bp
ATAGGATGCAACCTTAGCAGAATGAGCACAGGCACGGCGGAGCAAGAATC
ATGCGACTGGACGCAGTTGCCGGCGGACGTGACGTCAACGATTCTATCAA
AAATCGGCGCCATCGATGTGCTGACGAGCGCGCAACGTGTGTGCTCTTCT
TGGCTGAGGATCTGCCACGATCCCGCCATGTGGCGGAACATTGACATGCA
CAACTTAGGAGATTTGTGGGACATGGACCATGACTTGGAGAAGATGTGCC
GCCACGCTGTTGACCGTAGCAACGGCCAATTGCTTTCCATCAATATCGAG
TACTTCGGTACCGATGAGCTTCTCCAATACATCGCTAATAGGTCAAGGAA
TCTCAGGAATCTCAGACTTGTGTCATGTTATAACATTTCAGACCAAGGAT
TTTGTGAAGCTATTAAAGGGTTTCCACTGCTCGAGGAGCTTGAACTTTCA
TACTGCTCATTATCACAAGAAGCATTGGAAGCTGTTGGGAGCCTTTGCCC
ACTTCTGAGATCATTTAAATTGAACAACCGGGGTCACAGGTGCCCAAAAA
TAGAGTGTGATGATGATGCGAAAGCTATAGCAGAAAACATGCATGGATTG
CGCCATCTCCAGTTATTTGGAAACGAGCTGACAANTGTGGGGTTGCAGGC
TATTCTTGATGGCTGTCCTCACCTTGAATCACTTGACCTGCGCCAGTGTT
TCAATGTCAATCTGGNTGGGAAATTGGGGAAGATATGTGCTGAGAGAATC
AGAGATTACGACATCCCATGACTCTACCATGACTATGATTCNGTGCAGAT
TTTCAGAATTTTGNTGTCATCTGTAGAGATTACCATCTGGTATTCCGATA
TTGAGCTGTGTCTGATGAGATGATACTATGA
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