EY660680

Overview
NameEY660680
Unique NameEY660680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length545
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.764e-25
Identity = 44/77 (57.14%), Postives = 61/77 (79.22%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 242
            VY DF  YKSGVY+H+TGD+MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:  255 VYSDFLQYKSGVYQHVTGDLMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGIP 330          
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25
Identity = 46/86 (53.49%), Postives = 66/86 (76.74%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 269
            VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  255 VYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25
Identity = 46/86 (53.49%), Postives = 66/86 (76.74%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 269
            VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  255 VYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25
Identity = 46/86 (53.49%), Postives = 66/86 (76.74%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 269
            VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  255 VYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.714e-25
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 242
            VYEDF  YK+GVY H TG  +GGHA++++GWGT D+G  YW++AN WN +WG +GYF+I RG+NECGIE  VV G+P
Sbjct:  258 VYEDFYQYKTGVYVHTTGQELGGHAIRILGWGT-DNGTPYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVP 333          
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 8.041e-25
Identity = 46/80 (57.50%), Postives = 62/80 (77.50%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 251
            V+ DF  YKSGVYKH  GDVMGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG N CGIE ++VAG+P ++
Sbjct:  255 VFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGI-ENGVPYWLVANSWNVDWGDNGFFKILRGENHCGIESEIVAGIPRTQ 333          
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CYSP_SCHMA (Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24
Identity = 44/75 (58.67%), Postives = 60/75 (80.00%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 236
            VYEDF +YKSG+YKHITG+ +GGHA+++IGWG  ++   YW++AN WN  WG +GYF+I RG +EC IE +V+AG
Sbjct:  264 VYEDFLNYKSGIYKHITGEALGGHAIRIIGWGV-ENKTPYWLIANSWNEDWGENGYFRIVRGRDECSIESEVIAG 337          
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24
Identity = 45/82 (54.88%), Postives = 63/82 (76.83%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 257
            VYEDF HYKSG+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RGSN+CGIE  + AG+  +++L
Sbjct:  262 VYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIVRGSNDCGIEGTIAAGIVDTESL 342          
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24
Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 242
            V+ DF  YKSGVYKH  GD+MGGHA++++GWG  ++G  YW+ AN WN  WG +G+FKI RG N CGIE ++VAG+P
Sbjct:  255 VFSDFLTYKSGVYKHEAGDMMGGHAIRILGWGV-ENGVPYWLAANSWNLDWGDNGFFKILRGENHCGIESEIVAGIP 330          
BLAST of EY660680 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 111.309 bits (277), Expect = 3.056e-24
Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = 3
Query:   12 VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 242
            VY DF  YKSGVY+H++G++MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:  255 VYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMP 330          
The following BLAST results are available for this feature:
BLAST of EY660680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
CATB_PIG2.764e-2557.14Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CATB_PONAB3.610e-2553.49Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_MACFA3.610e-2553.49Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_HUMAN3.610e-2553.49Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CPR4_CAEEL4.714e-2561.04Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]
CATB_RAT8.041e-2557.50Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CYSP_SCHMA1.791e-2458.67Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CYSP2_HAECO1.791e-2454.88Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]
CATB_MOUSE2.340e-2458.44Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CATB_BOVIN3.056e-2454.55Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-024-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660680 ID=EY660680; Name=EY660680; organism=Citrus sinensis; type=EST; length=545bp
CCACGCGTCCGGTTTATGAGGATTTTGCTCACTACAAATCTGGGGTCTAC
AAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGG
TTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGT
GGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCA
AATGAGTGTGGTATTGAAGAGGATGTGGTTGCTGGTTTGCCTTCATCCAA
AAATCTTGTCAAAGAGATTACAAGTGCAGATATGTTTGAGGATGCTTCAG
CTTGAGAGCAGACTTTGCTATACCTTCATGTTGTTATTTATATATCAAAT
GTGTAGCTATAGGGGTGTATCGTTGAACCTAAGCTATCAAGGCATGAAAT
GGGAAGCTCCCGTCTTGCATAATTGAATGTATTAATGGAGTTTAATGTTG
TGTGTAAAAATAGAACCAGTTGTAATAANNANANNANTTNNCCAAAAAAA
AAAAATAAAAATATTCNTTNCTTTAACACCATNAATAAAATNAAT
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