EY660675

Overview
NameEY660675
Unique NameEY660675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGAL3_ARATH (Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BGAL3 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.809e-28
Identity = 54/94 (57.45%), Postives = 74/94 (78.72%), Query Frame = 3
Query:   12 ENKGNSNSTGNAKVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVCS 293
            E+ G   +    KV L+C+PGQ+I SI+FASFGTP GTCGS+Q+G CHA  S+A+LE++C+G+  C++ IS+  FG DPCPNVLKRL+V+AVC+
Sbjct:  753 ESYGKGQTFHRPKVHLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILERKCVGKARCAVTISNSNFGKDPCPNVLKRLTVEAVCA 846          
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGAL5_ORYSJ (Beta-galactosidase 5 OS=Oryza sativa subsp. japonica GN=Os03g0165400 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.348e-27
Identity = 54/85 (63.53%), Postives = 72/85 (84.71%), Query Frame = 3
Query:   45 AKVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVCSTA 299
            AKV L+CAPGQ+I++I+FASFGTP GTCG+FQ+G CH+ NS+++LEK+CIG + C + IS   FG DPCP V+KR++V+AVCSTA
Sbjct:  756 AKVHLKCAPGQTISAIKFASFGTPLGTCGTFQQGECHSINSNSVLEKKCIGLQRCVVAISPSNFGGDPCPEVMKRVAVEAVCSTA 840          
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGAL_SOLLC (Beta-galactosidase OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.245e-26
Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 3
Query:   48 KVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVCS 293
            K  L+CAPGQ I+SI+FASFGTP G CG+FQ+G+CHAP S+   +K C+G+ESCS+ ++   FG DPC NVLK+LSV+A+CS
Sbjct:  754 KAHLKCAPGQKISSIKFASFGTPEGVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGDPCRNVLKKLSVEAICS 835          
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGAL1_ARATH (Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.344e-25
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 3
Query:   21 GNSNSTGNAKVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVCS 293
            G  N   + K  LQC PGQ IT+++FASFGTP GTCGS+++G+CHA +S+    K C+GQ  CS+ ++  +FG DPCPNV+K+L+V+AVC+
Sbjct:  757 GKVNKPLHPKAHLQCGPGQKITTVKFASFGTPEGTCGSYRQGSCHAHHSYDAFNKLCVGQNWCSVTVAPEMFGGDPCPNVMKKLAVEAVCA 847          
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGAL_ASPOF (Beta-galactosidase OS=Asparagus officinalis PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.114e-22
Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 3
Query:   39 GNAKVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKE-----CIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVC 290
            G  KV L C PGQ ++ I+FASFGTP GTCGSF +G+CHA  S+   E+E     C+GQE CS+ ++  VFG DPCP  +K+L+V+A+C
Sbjct:  743 GRPKVHLSCDPGQKMSKIKFASFGTPQGTCGSFSEGSCHAHKSYDAFEQEGLMQNCVGQEFCSVNVAPEVFGGDPCPGTMKKLAVEAIC 831          
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGAL2_ORYSJ (Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.102e-21
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 3
Query:   45 AKVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVC 290
            AKV LQC  GQ IT I+FASFGTP G+CGS+ +G CHA  S+ +  K C+GQE C + +   +FG DPCP  +KR  V+A+C
Sbjct:  745 AKVHLQCDNGQKITEIKFASFGTPQGSCGSYTEGGCHAHKSYDIFWKNCVGQERCGVSVVPEIFGGDPCPGTMKRAVVEAIC 826          
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGAL3_ORYSJ (Beta-galactosidase 3 OS=Oryza sativa subsp. japonica GN=Os01g0875500 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.176e-20
Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 3
Query:   45 AKVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVCS 293
            AKV L C  G+SI+S++F SFG PSGTC S+Q+G+CH PNS +++EK C+    C++ +S   FG D CP V K L+++A CS
Sbjct:  769 AKVQLSCPKGKSISSVKFVSFGNPSGTCRSYQQGSCHHPNSISVVEKACLNMNGCTVSLSDEGFGEDLCPGVTKTLAIEADCS 851          
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGA16_ARATH (Beta-galactosidase 16 OS=Arabidopsis thaliana GN=BGAL16 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.382e-19
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 3
Query:   48 KVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVCS 293
            KV LQC  G+ I+ I FASFGTP+G+CGS+  G+CH+PNS A+++K C+ +  CS+ + S  FG D CP+ +K L V+A CS
Sbjct:  734 KVQLQCPTGRKISKILFASFGTPNGSCGSYSIGSCHSPNSLAVVQKACLKKSRCSVPVWSKTFGGDSCPHTVKSLLVRAQCS 815          
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGA14_ARATH (Beta-galactosidase 14 OS=Arabidopsis thaliana GN=BGAL14 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.137e-17
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   48 KVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVC 290
            K +++C P + +  ++FASFG P+GTCG+F  G C A  S  ++EKEC+G+  CSI ++   FG   CP ++K L+VQ  C
Sbjct:  757 KAVMRCPPEKQMVEVQFASFGDPTGTCGNFTMGKCSASKSKEVVEKECLGRNYCSIVVARETFGDKGCPEIVKTLAVQVKC 837          
BLAST of EY660675 vs. ExPASy Swiss-Prot
Match: BGAL7_ORYSJ (Beta-galactosidase 7 OS=Oryza sativa subsp. japonica GN=Os05g0428100 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.193e-16
Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 3
Query:   48 KVLLQCAPGQSITSIEFASFGTPSGTCGSFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPNVLKRLSVQAVC 290
            KV + C  G  I+SIEFAS+G P G C SF+ G+CHA +S +++++ CIG+  CSI + +  FG DPCP + K L V A C
Sbjct:  694 KVRIWCQGGNRISSIEFASYGNPVGDCRSFRIGSCHAESSESVVKQSCIGRRGCSIPVMAAKFGGDPCPGIQKSLLVVADC 774          
The following BLAST results are available for this feature:
BLAST of EY660675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
BGAL3_ARATH8.809e-2857.45Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BG... [more]
BGAL5_ORYSJ3.348e-2763.53Beta-galactosidase 5 OS=Oryza sativa subsp. japoni... [more]
BGAL_SOLLC8.245e-2660.98Beta-galactosidase OS=Solanum lycopersicum PE=1 SV... [more]
BGAL1_ARATH5.344e-2552.75Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BG... [more]
BGAL_ASPOF1.114e-2252.81Beta-galactosidase OS=Asparagus officinalis PE=2 S... [more]
BGAL2_ORYSJ2.102e-2153.66Beta-galactosidase 2 OS=Oryza sativa subsp. japoni... [more]
BGAL3_ORYSJ5.176e-2050.60Beta-galactosidase 3 OS=Oryza sativa subsp. japoni... [more]
BGA16_ARATH4.382e-1951.22Beta-galactosidase 16 OS=Arabidopsis thaliana GN=B... [more]
BGA14_ARATH9.137e-1743.21Beta-galactosidase 14 OS=Arabidopsis thaliana GN=B... [more]
BGAL7_ORYSJ1.193e-1648.15Beta-galactosidase 7 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-024-G05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660675 ID=EY660675; Name=EY660675; organism=Citrus sinensis; type=EST; length=658bp
CCACGCGTCCGGAAAATAAGGGCAACAGTAATTCTACTGGCAATGCTAAA
GTTCTTCTACAGTGTGCGCCAGGTCAATCTATTACAAGTATTGAATTCGC
AAGTTTTGGGACTCCTTCTGGAACTTGTGGGAGTTTTCAGAAAGGAACTT
GTCATGCTCCCAACTCTCATGCCATGTTAGAGAAGGAATGCATAGGGCAG
GAGAGTTGTTCCATTTTCATATCCAGTGGTGTTTTTGGGACAGACCCGTG
TCCTAATGTTTTGAAGAGGTTATCAGTCCAAGCTGTATGTTCAACAGCTG
ATGCTAACACTCAATCCTGATTCAATTCGTTGAATGATCCACTGCAGTCA
TCCTACACAGGCTTTCTTCAAGGTGACATTGGAAAACTTGTTATTACCAC
CAAATGCCCCAGGACAAACTACCAAGTAAGGGGATGAATGGGTATACATA
CAAAAAGTTGAAATTTGATTGTTTGAATACCATGCCGCCATTATTTATAA
GTTATTATCTATGGGTATTAGATTTAGATTTTGTTGTAAAATTTTTATGG
ATGATCTGTATTTCGGTAAGGAGGTGAGATTTGCACAGCAATGCTTCCTC
CAATGTAGTAAATGTGGAGTTGTGTGAAAAAAANNAANAAAAAAAAAAAA
AAAAAANA
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