EY660674

Overview
NameEY660674
Unique NameEY660674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: TYDC1_PAPSO (Tyrosine/DOPA decarboxylase 1 OS=Papaver somniferum GN=TYDC1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.217e-16
Identity = 54/152 (35.53%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  112 VIDCIAENYKDIEKHPGLAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGCSVFVIT-LARFSGNN*TLIHRVGLHEENALASIFMF---GIEKGGRVLHRIT*ESLVCTLTAAGDK 555
            +ID +A+ YK++EK+P    ++P ++   LP+S P++P+            I+P LTH +SPN+F YF +    A FLG+ML TG +V     ++  +      I    L +   L   F+F   G   GG VL   T E+++CTLTAA DK
Sbjct:   32 IIDFLADYYKNVEKYPVRTQVDPGYLKKRLPESAPYNPESIETILEDVTNDIIPGLTHWQSPNYFAYFPSSGSIAGFLGEMLSTGFNVVGFNWMSSPAATELESIVMNWLGQMLTLPKSFLFSSDGSSGGGGVLQGTTCEAILCTLTAARDK 183          
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: TYDC1_ARATH (Tyrosine decarboxylase 1 OS=Arabidopsis thaliana GN=ELI5 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 5.372e-16
Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  112 VIDCIAENYKDIEKHPGLAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGCSV 375
            ++D IA+ YK IE  P L+ ++P ++   LPDS P  P+            ILP +TH +SP+FF Y+ + +  A FLG+ML  G  +
Sbjct:   24 MVDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPETLDQVLDDVRAKILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGI 111          

HSP 2 Score: 41.2022 bits (95), Expect = 5.372e-16
Identity = 34/132 (25.76%), Postives = 58/132 (43.94%), Query Frame = 2
Query:  389 WLDSPVTTEL*SIVWDCMRKML*LPSSCLVSRK----VVESCTESLESLSFAL*QLLETNIEKTW*RL*HITKLIVYASDQTPLLSAESAGLVGIPPPDFPAHRTSFSIDLFPAPHTIHAADRNXFKYALVP 772
            W+ SP  TEL  IV D + K+L LP   +        +  S +E++  +  A    +  ++ K       + KL+VY+SDQT     ++  + GI P +     T  S +    P ++  A     +  L+P
Sbjct:  116 WVTSPAATELEMIVLDWVAKLLNLPEQFMSKGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKN-----ALEKLVVYSSDQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGLIP 242          
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: TYDC2_PAPSO (Tyrosine/DOPA decarboxylase 2 OS=Papaver somniferum GN=TYDC2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.039e-14
Identity = 50/151 (33.11%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  112 VIDCIAENYKDIEKHPGLAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGCSVFVITLARFSGNN*TLIHRVGLHEENALASI---FMFGIEKGGRVLHRIT*ESLVCTLTAAGDK 555
            +ID +A+ Y+D+EK+P  + +EP ++   LP++ P++P+            I+P LTH +SPN++ YF +    A FLG+ML TG +  V+     S    T +  V +     + ++   F+F    GG VL   + E+++CTLTAA D+
Sbjct:   34 IIDFLADYYRDVEKYPVRSQVEPGYLRKRLPETAPYNPESIETILQDVTTEIIPGLTHWQSPNYYAYFPSSGSVAGFLGEMLSTGFN--VVGFNWMSSPAATELESVVMDWFGKMLNLPESFLFS-GSGGGVLQGTSCEAILCTLTAARDR 181          
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: TYDC3_PAPSO (Tyrosine/DOPA decarboxylase 3 OS=Papaver somniferum GN=TYDC3 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.772e-14
Identity = 49/151 (32.45%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  112 VIDCIAENYKDIEKHPGLAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGCSVFVITLARFSGNN*TLIHRVGLHEENALASI---FMFGIEKGGRVLHRIT*ESLVCTLTAAGDK 555
            +ID +A+ Y+D+EK+P  + +EP ++   LP++ P++P+            I+P LTH +SPN++ YF +    A FLG+ML TG +  V+     S    T +  + +     + ++   ++F    GG VL   T E+++CTLTAA D+
Sbjct:   34 IIDFLADYYRDVEKYPVRSQVEPGYLRKRLPETAPYNPESIETILQDVTSEIIPGLTHWQSPNYYAYFPSSGSVAGFLGEMLSTGFN--VVGFNWMSSPAATELEGIVMDWFGKMLNLPKSYLFS-GTGGGVLQGTTCEAILCTLTAARDR 181          
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: TYDC4_PETCR (Tyrosine decarboxylase 4 OS=Petroselinum crispum GN=TYRDC-4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.947e-14
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 1
Query:  112 VIDCIAENYKDIEKHPGLAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGCSVFVITLARFSGNN*TLIHRVGLHEENALASIF--MFGIEK-------GGRVLHRIT*ESLVCTLTAAGDK----H*KDLVEALTHY*AD 600
            +ID +A+ Y+ +E +P  + + P ++   LP+S P++P+            I+P +TH +SPNFF YF +   TA FLG+ML TG +V         G N  ++       EN +   F  M  + K       GG VL   T E+++CTL AA DK    H  D +  L  Y +D
Sbjct:   33 MIDFLADYYRKVENYPVRSQVSPGYLREILPESAPYNPESLETILQDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNVV--------GFN-WMVSPAATELENVVTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDKNLRQHGMDNIGKLVVYCSD 199          
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: TYDC3_PETCR (Tyrosine decarboxylase 3 OS=Petroselinum crispum GN=TYRDC-3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.947e-14
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 1
Query:  112 VIDCIAENYKDIEKHPGLAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGCSVFVITLARFSGNN*TLIHRVGLHEENALASIF--MFGIEK-------GGRVLHRIT*ESLVCTLTAAGDK----H*KDLVEALTHY*AD 600
            +ID +A+ Y+ +E +P  + + P ++   LP+S P++P+            I+P +TH +SPNFF YF +   TA FLG+ML TG +V         G N  ++       EN +   F  M  + K       GG VL   T E+++CTL AA DK    H  D +  L  Y +D
Sbjct:   34 MIDFLADYYRKVENYPVRSQVSPGYLREILPESAPYNPESLETILQDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNVV--------GFN-WMVSPAATELENVVTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDKNLRQHGMDNIGKLVVYCSD 200          
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: TYDC2_PETCR (Tyrosine decarboxylase 2 OS=Petroselinum crispum GN=TYRDC-2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.947e-14
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 1
Query:  112 VIDCIAENYKDIEKHPGLAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGCSVFVITLARFSGNN*TLIHRVGLHEENALASIF--MFGIEK-------GGRVLHRIT*ESLVCTLTAAGDK----H*KDLVEALTHY*AD 600
            +ID +A+ Y+ +E +P  + + P ++   LP+S P++P+            I+P +TH +SPNFF YF +   TA FLG+ML TG +V         G N  ++       EN +   F  M  + K       GG VL   T E+++CTL AA DK    H  D +  L  Y +D
Sbjct:   32 MIDFLADYYRKVENYPVRSQVSPGYLREILPESAPYNPESLETILQDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNVV--------GFN-WMVSPAATELENVVTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDKNLRQHGMDNIGKLVVYCSD 198          
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: TYDC1_PETCR (Tyrosine decarboxylase 1 (Fragment) OS=Petroselinum crispum GN=TYRDC-1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.947e-14
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 1
Query:  112 VIDCIAENYKDIEKHPGLAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGCSVFVITLARFSGNN*TLIHRVGLHEENALASIF--MFGIEK-------GGRVLHRIT*ESLVCTLTAAGDK----H*KDLVEALTHY*AD 600
            +ID +A+ Y+ +E +P  + + P ++   LP+S P++P+            I+P +TH +SPNFF YF +   TA FLG+ML TG +V         G N  ++       EN +   F  M  + K       GG VL   T E+++CTL AA DK    H  D +  L  Y +D
Sbjct:    9 MIDFLADYYRKVENYPVRSQVSPGYLREILPESAPYNPESLETILQDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNVV--------GFN-WMVSPAATELENVVTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDKNLRQHGMDNIGKLVVYCSD 175          
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: DDC_CATRO (Aromatic-L-amino-acid decarboxylase OS=Catharanthus roseus GN=TDC PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.364e-13
Identity = 48/156 (30.77%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   91 FSEGSRDVIDCIAENYKDIEKHPGLAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGC-SVFVITLARFSGNN*TLIHRVGLHEENALASIFMFGIEKGGRVLHRIT*ESLVCTLTAAGDK 555
            F + +  ++D IA+ YK++E +P L+ +EP ++   +P++ P+ P+            I+P +T+  SPNF+ +F A   +A FLG+ML T   SV    ++  +     +I    L +   L   FMF    GG V+   T ES++CT+ AA ++
Sbjct:   27 FRKQAHRMVDFIADYYKNVETYPVLSEVEPGYLRKRIPETAPYLPEPLDDIMKDIQKDIIPGMTNWMSPNFYAFFPATVSSAAFLGEMLSTALNSVGFTWVSSPAATELEMIVMDWLAQILKLPKSFMFS-GTGGGVIQNTTSESILCTIIAARER 181          
BLAST of EY660674 vs. ExPASy Swiss-Prot
Match: TYDC2_ARATH (Probable tyrosine decarboxylase 2 OS=Arabidopsis thaliana GN=At4g28680 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.376e-12
Identity = 32/96 (33.33%), Postives = 52/96 (54.17%), Query Frame = 1
Query:  112 VIDCIAENYKDIEKHPG----LAFIEPEHMTPPLPDSTPHSPKXXXXXXXXXXXXILPVLTH*KSPNFFDYFRAKAITAVFLGKMLWTGCSVFVIT 387
            ++D IA+ YK+++  P     L+ ++P ++   LPDS P  P+            I+P +TH +SP++F Y+ +    A FLG+ML  G SV   T
Sbjct:   72 MVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFT 167          

HSP 2 Score: 34.6538 bits (78), Expect = 1.376e-12
Identity = 36/133 (27.07%), Postives = 59/133 (44.36%), Query Frame = 2
Query:  389 WLDSPVTTEL*SIVWDCMRKML*LPSSCLVSRK---VVE--SCTESLESLSFAL*QLLETNIEKTW*RL*HITKLIVYASDQTPLLSAESAGLVGIPPPDFPAHRTSFSIDLFPAPHTIHAADRNXFKYALVP 772
            WL SP  TEL  IV D + K+L LP   L +     V++   C   L  +  A  ++L+  + KT      + +L+VY SDQT     ++  + GI   +    +T  S +    P ++  A  +      +P
Sbjct:  168 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILK-KVGKTL-----LPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIP 294          
The following BLAST results are available for this feature:
BLAST of EY660674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
TYDC1_PAPSO4.217e-1635.53Tyrosine/DOPA decarboxylase 1 OS=Papaver somniferu... [more]
TYDC1_ARATH5.372e-1637.50Tyrosine decarboxylase 1 OS=Arabidopsis thaliana G... [more]
TYDC2_PAPSO1.039e-1433.11Tyrosine/DOPA decarboxylase 2 OS=Papaver somniferu... [more]
TYDC3_PAPSO1.772e-1432.45Tyrosine/DOPA decarboxylase 3 OS=Papaver somniferu... [more]
TYDC4_PETCR3.947e-1432.95Tyrosine decarboxylase 4 OS=Petroselinum crispum G... [more]
TYDC3_PETCR3.947e-1432.95Tyrosine decarboxylase 3 OS=Petroselinum crispum G... [more]
TYDC2_PETCR3.947e-1432.95Tyrosine decarboxylase 2 OS=Petroselinum crispum G... [more]
TYDC1_PETCR3.947e-1432.95Tyrosine decarboxylase 1 (Fragment) OS=Petroselinu... [more]
DDC_CATRO4.364e-1330.77Aromatic-L-amino-acid decarboxylase OS=Catharanthu... [more]
TYDC2_ARATH1.376e-1233.33Probable tyrosine decarboxylase 2 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-024-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660674 ID=EY660674; Name=EY660674; organism=Citrus sinensis; type=EST; length=861bp
CCACGCGTCCGACGATCGGGAACGTGCCCCATCTCAAAATATTCTATTCA
CCGCCTCAGATGGTACTCCACACATGAAAAGTCGTTGACCTTCTCTGAAG
GATCCAGAGATGTCATCGATTGCATTGCTGAGAATTACAAAGACATCGAA
AAACACCCTGGTCTTGCTTTTATTGAGCCTGAACATATGACACCTCCGTT
GCCTGACTCAACACCCCATTCACCAAAGTGATTGAACGATTGTCTACTTG
ACGTCTGTGACTGCATCTTACCTGTGCTCACTCACTGAAAGAGCCCCAAT
TTCTTTGACTATTTCAGAGCGAAAGCTATCACTGCTGTGTTTCTAGGGAA
GATGCTTTGGACAGGTTGCAGCGTGTTTGTGATTACACTGGCTCGATTCT
CCGGTAACAACTGAACTCTAATCCATCGTGTGGGATTGCATGAGGAAAAT
GCTCTAGCTTCCATCTTCATGTTTGGTATCGAGAAAGGTGGTAGAGTCCT
GCACAGAATCACTTGAGAGTCTCTCGTTTGCACTCTGACAGCTGCTGGAG
ACAAACATTGAAAAGACTTGGTAGAGGCTTTGACACATTACTAAGCTGAT
TGTGTATGCCTCCGATCAGACACCTTTGCTCTCTGCAGAATCTGCCGGAT
TAGTTGGTATCCCTCCACCAGATTTTCCGGCTCATCGCACATCATTTTCA
ATTGATTTGTTCCCTGCACCACATACAATTCATGCTGCTGATCGAAACNA
TTTCAAATATGCGCTAGTTCCACATCAACTTGGGGGCTACGGCTGGGACA
CCGGGCGCAAGTACCGGTGATCACCGTTGGGGAACTGGGAAAATTTGCAA
AGAATTACAAA
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