EY660665

Overview
NameEY660665
Unique NameEY660665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660665 vs. ExPASy Swiss-Prot
Match: YJCL_BACSU (Uncharacterized membrane protein yjcL OS=Bacillus subtilis GN=yjcL PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14
Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 1 
Query:  193 FPTQFNKLAPAGEAMALILMQVFFTVVGASGNIWSVINTAPSIFMFALVQIAIHLAVILGLGKLFRFDQKLLLIASNANVGGPTTACGMATAKGWSSLIVP 495
            FP  F +L  + E +   L+ +FF V+G   ++  ++  AP I +F  +    +LAV L  GKLFR   + +L+A NA VGGPTTA  MA AKGW  L+ P
Sbjct:  270 FPRFFERLNGSQE-LGTFLIYLFFVVIGIPADLRLIVTNAPLILLFVFIIAISNLAVSLAAGKLFRVRLEEILLAVNATVGGPTTAAAMAIAKGWRELVAP 369
The following BLAST results are available for this feature:
BLAST of EY660665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YJCL_BACSU1.285e-1441.58Uncharacterized membrane protein yjcL OS=Bacillus ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-024-F07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660665 ID=EY660665; Name=EY660665; organism=Citrus sinensis; type=EST; length=713bp
CCACGCGTCCGAGATGTTTCAATGAATGAGGGTTCTGTCCGTGGTGACAA
ACCTCCTGTGCTACAGTTTGCAACAGCCCTTGCTGTAGCCTTCGCTATCT
GCAAGGCTGGCACTTTTCTCACAAAATATTTTGGTATTCAGGGAGGTAGC
CTTCCAGCCATAACAGCTATTGTTGTTACTTTAGCAACTACGTTTCCAAC
CCAGTTCAATAAACTTGCCCCAGCTGGTGAAGCTATGGCTCTAATTCTCA
TGCAGGTATTTTTCACTGTGGTGGGAGCAAGCGGTAACATATGGAGTGTT
ATAAACACAGCACCTAGCATTTTCATGTTTGCTCTTGTCCAGATTGCCAT
TCATCTTGCTGTGATCCTCGGATTAGGAAAGCTATTTCGCTTTGATCAAA
AGCTACTGCTTATAGCATCGAACGCTAATGTTGGAGGCCCTACAACTGCA
TGCGGAATGGCCACGGCTAAAGGCTGGAGTTCTTTGATTGTTCCTGGTAT
TCTCGCCGGTATTTTTGGAATTGCCATTGCAACTTTTCTTGGCCTTGCCT
TTGGAGTCACTGTACTCAAATATATGTAGTACGCTCTCAAATTGTATTCA
ATAATTTGTAACCGATGTTTTAATAAGTGATAAAGTGAATTTNGCAAGGT
TGCTTCTGTAAATGATATTTTTAAGAAATCTGATGTATTAACTAACTTTT
AAGGGTTTTCCCC
back to top