EY660557

Overview
NameEY660557
Unique NameEY660557
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8225 contig Csv1_Contig8225:806..1554. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: IDH5_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.803e-63
Identity = 116/135 (85.93%), Postives = 129/135 (95.56%), Query Frame = 2
Query:   26 EEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 430
            EEVVIDNCCMMLVKNPA FDVLVMPNLYGDIISDLCAGL+GGLGLTPSCNIGE G+ALAEAVHGSAPDIAGKNLANPTALLLS V MLRHL+ +++A++I +AI++TIAEGKYRTADLGGSSTT++FTKAICDHL
Sbjct:  240 EEVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAVHGSAPDIAGKNLANPTALLLSGVMMLRHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374          
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: IDH6_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.178e-61
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = 2
Query:   26 EEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 430
            E+VVIDNCCMMLVKNPA FDVLVMPNLYGDIISDLCAGL+GGLGLTPS NIGE GIALAEAVHGSAPDIAG NLANPTALLLS V MLRHL+L+ +A++I +AI++TIAEGKYRTADLGGSSTT+DFTKAICDHL
Sbjct:  240 EKVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSMNIGEDGIALAEAVHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAEQIHSAIINTIAEGKYRTADLGGSSTTTDFTKAICDHL 374          
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: LEU3_SOLTU (3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.670e-55
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 2
Query:   26 EEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGK 361
            EEVVIDNCCMMLVKNPA FDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSV+MLRHLELHDKADRIQ+AIL TIA GK
Sbjct:  233 EEVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVSMLRHLELHDKADRIQDAILKTIAGGK 344          
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: IDHA_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostelium discoideum GN=idhA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.479e-44
Identity = 86/128 (67.19%), Postives = 105/128 (82.03%), Query Frame = 2
Query:   26 EEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFT 409
            EE+ IDN CM LV +P   DV+V+PNLYGDI+SDLCAGLIGGLGLTPS NIGE G A+ EAVHG+APDIAGKN ANPTAL+LSS+ MLRHL    +A  I+NA+L+T+ EGK +T DLGG+S+ S++T
Sbjct:  214 EELTIDNNCMQLVLDPNQMDVMVLPNLYGDIVSDLCAGLIGGLGLTPSGNIGENGSAIFEAVHGTAPDIAGKNKANPTALILSSIMMLRHLGHFHEASIIENAVLNTLTEGKVKTGDLGGNSSCSEYT 341          
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: IDH3A_BOVIN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos taurus GN=IDH3A PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.446e-43
Identity = 84/131 (64.12%), Postives = 107/131 (81.68%), Query Frame = 2
Query:   29 EVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 421
            E+ +D  C+ +V++P+ FDVLVMPNLYGDI+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG+S  SDFT+ IC
Sbjct:  229 EMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIETACFATIKDGKSLTKDLGGNSKCSDFTEEIC 359          
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: IDH3A_DROME (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Drosophila melanogaster GN=l(1)G0156 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.889e-43
Identity = 87/135 (64.44%), Postives = 106/135 (78.52%), Query Frame = 2
Query:   26 EEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 430
            EE  +D  C+ +V+NP  +DVLVMPNLYGDI+SD+CAGL+GGLGLTPS N+G  G AL E+VHG+APDIAGK+LANPTALLLS+V MLRH+EL+  AD+I+ A   TI EGKY T DLGG +  S+FT  IC  L
Sbjct:  244 EEKYLDTVCLNMVQNPGKYDVLVMPNLYGDILSDMCAGLVGGLGLTPSGNMGLNG-ALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKIERAAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377          
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: IDH3A_PONAB (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Pongo abelii GN=IDH3A PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.467e-43
Identity = 84/131 (64.12%), Postives = 107/131 (81.68%), Query Frame = 2
Query:   29 EVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 421
            E+ +D  C+ +V++P+ FDVLVMPNLYGDI+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  229 EMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: IDH3A_MACFA (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.467e-43
Identity = 84/131 (64.12%), Postives = 107/131 (81.68%), Query Frame = 2
Query:   29 EVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 421
            E+ +D  C+ +V++P+ FDVLVMPNLYGDI+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  210 EMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 340          
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: IDH3A_HUMAN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo sapiens GN=IDH3A PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.467e-43
Identity = 84/131 (64.12%), Postives = 107/131 (81.68%), Query Frame = 2
Query:   29 EVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 421
            E+ +D  C+ +V++P+ FDVLVMPNLYGDI+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  229 EMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY660557 vs. ExPASy Swiss-Prot
Match: IDH3A_MOUSE (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus GN=Idh3a PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.496e-43
Identity = 83/131 (63.36%), Postives = 107/131 (81.68%), Query Frame = 2
Query:   29 EVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 421
            E+ +D  C+ +V++P+ FDVLVMPNLYGDI+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  229 EMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
The following BLAST results are available for this feature:
BLAST of EY660557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
IDH5_ARATH2.803e-6385.93Isocitrate dehydrogenase [NAD] catalytic subunit 5... [more]
IDH6_ARATH1.178e-6185.93Isocitrate dehydrogenase [NAD] catalytic subunit 6... [more]
LEU3_SOLTU3.670e-5595.543-isopropylmalate dehydrogenase, chloroplastic OS=... [more]
IDHA_DICDI8.479e-4467.19Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
IDH3A_BOVIN1.446e-4364.12Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_DROME1.889e-4364.44Probable isocitrate dehydrogenase [NAD] subunit al... [more]
IDH3A_PONAB2.467e-4364.12Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_MACFA2.467e-4364.12Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_HUMAN2.467e-4364.12Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_MOUSE5.496e-4363.36Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-023-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660557 ID=EY660557; Name=EY660557; organism=Citrus sinensis; type=EST; length=750bp
ATTCCCGGGTCGACCACGCGTCCGTGAGGAAGTTGTTATCGACAATTGCT
GCATGATGCTTGTGAAGAATCCAGCGGCTTTCGATGTGTTGGTAATGCCT
AACCTCTATGGTGACATCATTAGTGACCTATGTGCTGGGTTGATTGGTGG
ATTGGGCTTAACACCTAGTTGCAATATTGGGGAAGGAGGAATTGCCCTTG
CTGAAGCTGTTCATGGTTCAGCACCTGATATTGCTGGAAAGAATTTGGCA
AATCCAACTGCTTTGCTGTTGAGTTCGGTAACAATGTTGCGCCATTTGGA
GCTCCATGACAAGGCTGATAGGATCCAAAATGCTATCCTGAGCACAATTG
CAGAGGGGAAGTATCGAACTGCAGATCTTGGTGGCTCTTCAACGACATCA
GATTTCACAAAGGCAATCTGCGATCATCTTTAAATATTTCTTTCTACATA
GAATTTGAATTCGTGTTCAAGATTTACATTCTACCTTTCTTTTTTTGAGC
AATGTCTCAAATTTGTTTTTTTCCCCCCTTTTTAAAGTGTTTTTCTTTGA
GGGGAATAAGACCCATCACCTTGGTGACTATTTAGAAGTTTTTTTCTGAT
GAAACTGTTCAGCCAGAGTGTATATGGCCGTCCTCAGAAAAGGTATTTAT
ACGGCAATATTTATTTCCTCGCTGTCTGTGAAATCCAAAAATTGAACTAA
CCGGATCTGAGAAATTGNTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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