EY660479

Overview
NameEY660479
Unique NameEY660479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.224e-67
Identity = 119/147 (80.95%), Postives = 132/147 (89.80%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 442
            IV TRHYR+PEVILGLGWSY CD+WS+GCIL ELCTGEALFQTH+NLEHLAMMERALGPLPEHM R+ASRG EKYFRRG RLNWPEGA SRESI+AVK+LDRLK+MVS HVD  RS   DLL+GLL YDPSERLTA +AL+HPFF++
Sbjct:  252 IVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALDHPFFKS 398          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 6.951e-63
Identity = 110/150 (73.33%), Postives = 127/150 (84.67%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 451
            IVSTRHYRAPEVILG+GW+YPCD+WS+GCILVELC+GEALFQTHENLEHLAMMER LGPLP HM+ RA R +EKYFRRG++L+WPEGA SR+S+KAV KL RL N++  HVD +   L DLL GLLRYDP+ER  AR+ALNHPFF    E
Sbjct:  299 IVSTRHYRAPEVILGVGWNYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRRGAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKAREALNHPFFTRSRE 448          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 4.663e-59
Identity = 104/145 (71.72%), Postives = 125/145 (86.21%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 436
            IVSTRHYRAPEVILGLGWSYPCD+WSVGCI+VELCTGEALFQTHENLEHLAMMER LGP P+ M+++  R +EKY RRG RL+WP+GA SR+S+KAV KL RL+N++  HVD +   L +++ GLLR+DPSER+TAR+AL HPFF
Sbjct:  280 IVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVRRG-RLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITAREALRHPFF 423          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 1.842e-39
Identity = 75/145 (51.72%), Postives = 105/145 (72.41%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 436
            +VSTRHYRAPE+ILGLGWSYPCD+WS+GCILVEL TG+ALFQTHE+ EHL MME+ LGP   +MI R+SR ++++F+   ++ +P     ++SI  ++ L  L+ + ++      + L DLL  +  YDP  R+TA++AL HPFF
Sbjct:  539 VVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTGQALFQTHEDSEHLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSINYLQSLQTLEQIFAVSSPEV-ALLLDLLKKVFVYDPKRRITAKEALWHPFF 682          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: CLK2_HUMAN (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.108e-35
Identity = 80/152 (52.63%), Postives = 100/152 (65.79%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 445
            IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E    G   RE+ K +++   L +    H       L DL+  +L Y+P++RLT  +AL HPFF  L
Sbjct:  341 IVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVRENCKPLRRY--LTSEAEEH-----HQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 482          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: CLK4_HUMAN (Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.595e-35
Identity = 72/145 (49.66%), Postives = 100/145 (68.97%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 436
            +VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E   G  +FQTH++ EHLAMMER LGP+P+HMI++  +   KYF   ++L+W E + +   ++  ++   LK  +  H D     L DL+  +L YDP++R+T  +AL HPFF
Sbjct:  337 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPQHMIQKTRK--RKYFHH-NQLDWDEHSSAGRYVR--RRCKPLKEFMLCH-DEEHEKLFDLVRRMLEYDPTQRITLDEALQHPFF 475          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: CLK1_HUMAN (Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 6.132e-35
Identity = 77/146 (52.74%), Postives = 99/146 (67.81%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE-GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 436
            +VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E   G  +F TH++ EHLAMMER LGPLP+HMI++  +   KYF    RL+W E  +  R   +  K L     M+S  V+  R  L DL+  +L YDP++R+T R+AL HPFF
Sbjct:  339 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHH-DRLDWDEHSSAGRYVSRRCKPLKEF--MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 477          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: CLK2_MOUSE (Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.009e-35
Identity = 79/149 (53.02%), Postives = 99/149 (66.44%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 436
            IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E    G   RE+ K +++   L +    H       L DL+  +L Y+P++RLT  +AL HPFF
Sbjct:  340 IVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPVPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVRENCKPLRRY--LTSEAEDH-----HQLFDLIENMLEYEPAKRLTLGEALQHPFF 478          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: CLK4_MOUSE (Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.366e-34
Identity = 72/145 (49.66%), Postives = 98/145 (67.59%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 436
            +VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E   G  +FQTH++ EHLAMMER LGP+P HMI++  +   KYF   ++L+W E + +   ++  ++   LK  +  H D     L DL+  +L YDP+ R+T  +AL HPFF
Sbjct:  337 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPAHMIQKTRK--RKYFHH-NQLDWDEHSSAGRYVR--RRCKPLKEFMLCH-DEEHEKLFDLVRRMLEYDPARRITLDEALQHPFF 475          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: CLK1_MOUSE (Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 73/150 (48.67%), Postives = 100/150 (66.67%), Query Frame = 2
Query:    2 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 451
            +VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E   G  +F TH++ EHLAMMER LGPLP+HMI++  +   +YF    RL+W E + +   +   ++   LK  + L  D     L DL+  +L YDP++R+T ++AL HPFF  L +
Sbjct:  338 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSREHLAMMERILGPLPKHMIQKTRK--RRYFHH-DRLDWDEHSSAGRYVS--RRCKPLKEFM-LSQDAEHEFLFDLVGKILEYDPAKRITLKEALKHPFFYPLKK 481          
The following BLAST results are available for this feature:
BLAST of EY660479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
AFC3_ARATH1.224e-6780.95Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
AFC1_ARATH6.951e-6373.33Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
AFC2_ARATH4.663e-5971.72Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
LKH1_SCHPO1.842e-3951.72Dual specificity protein kinase lkh1 OS=Schizosacc... [more]
CLK2_HUMAN2.108e-3552.63Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
CLK4_HUMAN3.595e-3549.66Dual specificity protein kinase CLK4 OS=Homo sapie... [more]
CLK1_HUMAN6.132e-3552.74Dual specificity protein kinase CLK1 OS=Homo sapie... [more]
CLK2_MOUSE8.009e-3553.02Dual specificity protein kinase CLK2 OS=Mus muscul... [more]
CLK4_MOUSE1.366e-3449.66Dual specificity protein kinase CLK4 OS=Mus muscul... [more]
CLK1_MOUSE6.780e-3448.67Dual specificity protein kinase CLK1 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660479 ID=EY660479; Name=EY660479; organism=Citrus sinensis; type=EST; length=595bp
CATTGTTTCCACAAGACATTACAGAGCCCCTGAGGTTATTCTAGGGCTTG
GTTGGTCTTACCCATGTGATATGTGGAGTGTTGGTTGTATATTAGTCGAG
CTATGCACGGGTGAAGCGTTATTCCAAACACATGAGAACTTGGAGCATTT
GGCGATGATGGAGAGGGCGTTGGGTCCTCTGCCAGAGCATATGATTCGAA
GGGCCAGCCGAGGAACCGAAAAATATTTCAGGAGAGGATCAAGACTAAAT
TGGCCTGAGGGGGCAGTTTCTAGGGAGAGTATTAAAGCCGTGAAGAAGCT
AGATCGTCTGAAGAATATGGTATCGCTTCATGTAGACAGAGCAAGGTCTA
CTCTCACCGATTTGTTGCATGGTTTGTTGAGATATGATCCATCCGAACGT
CTCACTGCTCGGCAAGCTCTCAATCACCCCTTCTTTAGAAATCTAAATGA
ATAAAAGCTGGTAAGCAATGTTCGGTTAGTTGTAATGGTTGTTTATACGA
AATGTAAGTCTCAGACTGAGTTTCCCATTTACTTGTAATCTGTGCATAAA
TGTTAACTTAATGAAAATGTTTTGTTGTCTTTTAAAAAAAANNNN
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