EY660468

Overview
NameEY660468
Unique NameEY660468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660468 vs. ExPASy Swiss-Prot
Match: DRP2B_ARATH (Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 2.867e-81
Identity = 173/266 (65.04%), Postives = 195/266 (73.31%), Query Frame = 1
Query:   13 NDAILLVIIPAAQAPEIASSRALRVAKEFDGDGTRTVGVISKIDXXXXXXXXXXXXXXXXXXXGPPKTADISWVALIGQSVSIATAQSG-SESSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIRKRMKVRVPNVLSGLQGKSQIVQDELVRLGEQMVQSAEGTRSLALELCREFEDKFLNTLQLVRXLGGK-CCQF*GEFPNRINSF-LWTDILIL*MSEDCVRNGWLSTYLISPEKGLRSLIKGVLELAKNPLRFVV 801
            NDAILLV++PA+QA EI+SSRAL++AKE+D + TRTVG+ISKID                   GPPKT DI WVALIGQSVSIA+AQSG SE+SLETAWRAESESLKSILTGAPQSKLGRIALVD LA QIR RMK+R+PN+L+GLQGKSQIVQDEL RLGEQ+V SAEGTR++ALELCREFEDKFL  L      G K    F G FPNRI    L     +  +    +       YLISPEKGLRSLIK VLELAK+P R  V
Sbjct:  164 NDAILLVVVPASQASEISSSRALKIAKEYDPESTRTVGIISKIDQAAENPKSLAAVQALLSNQGPPKTTDIPWVALIGQSVSIASAQSGGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPNILTGLQGKSQIVQDELARLGEQLVSSAEGTRAIALELCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKKLPLDRHFDLNNVKRIVLEADGYQPYLISPEKGLRSLIKTVLELAKDPARLCV 429          
BLAST of EY660468 vs. ExPASy Swiss-Prot
Match: DRP2A_ARATH (Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 4.140e-80
Identity = 172/266 (64.66%), Postives = 194/266 (72.93%), Query Frame = 1
Query:   13 NDAILLVIIPAAQAPEIASSRALRVAKEFDGDGTRTVGVISKIDXXXXXXXXXXXXXXXXXXXGPPKTADISWVALIGQSVSIATAQSGS-ESSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIRKRMKVRVPNVLSGLQGKSQIVQDELVRLGEQMVQSAEGTRSLALELCREFEDKFLNTLQLVRXLGGK-CCQF*GEFPNRINSF-LWTDILIL*MSEDCVRNGWLSTYLISPEKGLRSLIKGVLELAKNPLRFVV 801
            NDAILLVI+PA+QA EI+SSRAL++AKE+D + TRT+G+I KID                   GPPKT DI WVA+IGQSVSIA+AQSGS E+SLETAWRAESESLKSILTGAPQSKLGRIALVD LA QIR RMK+R+P+VLSGLQGKSQIVQDEL RLGEQ+V SAEGTR++ALELCREFEDKFL  L      G K    F G FPNRI    L     +  +    +       YLISPEKGLRSLIK VLELAK+P R  V
Sbjct:  164 NDAILLVIVPASQASEISSSRALKIAKEYDPESTRTIGIIGKIDQAAENSKALAAVQALLSNQGPPKTTDIPWVAVIGQSVSIASAQSGSGENSLETAWRAESESLKSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELARLGEQLVNSAEGTRAIALELCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKQLPLDRHFDLNNVKRVVLEADGYQPYLISPEKGLRSLIKIVLELAKDPARLCV 429          
BLAST of EY660468 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.075e-11
Identity = 69/260 (26.54%), Postives = 112/260 (43.08%), Query Frame = 1
Query:   16 DAILLVIIPAAQAPEIASSRALRVAKEFDGDGTRTVGVISKIDXXXXXXXXXXXXXXXXXXXGPPKTADISWVALIGQSVSIATAQSGSESSLETAWRAESESLKSILT-GAPQSKLGRIALVDALAQQIRKRMKVRVPNVLSGLQGKSQIVQDELVRLGEQMVQSAEGTRSLALELCREFEDKFLNTLQLVRXLGGKCC-QF*GEFPNRINSFLWTDILIL*MSEDCVRNG-WLSTYLISPEKGLRSLIKGVLELAKNP 786
            + I+L I PA Q  +IA+S A+++AK+ D  G RT GV++K+D                     P      WV ++ +S     A       +  A R E E   +    G   SK+G   L   L++ +   ++ R+P++LS +    + ++ EL R+G  +   A       LE+CR F+  F   L   R  G +    F  + P  +    +   L L   +  V        +LI+PE+G R LI+G L   + P
Sbjct:  180 NCIILAISPANQ--DIATSDAIKLAKDVDPTGERTFGVLTKLDLMDKGTNALEVLEGRSYRLQHP------WVGIVNRS----QADINKNVDMMLARRKEREYFDTSPDYGHLASKMGSEYLAKLLSKHLESVIRTRIPSILSLINKSIEELERELDRMGRPVAVDAGAQLYTILEMCRAFDKIFKEHLDGGRPGGDRIYGVFDNQLPAALKKLPFDRHLSLQSVKKIVSEADGYQPHLIAPEQGYRRLIEGALGYFRGP 427          
The following BLAST results are available for this feature:
BLAST of EY660468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
DRP2B_ARATH2.867e-8165.04Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 S... [more]
DRP2A_ARATH4.140e-8064.66Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 S... [more]
DRP1E_ARATH1.075e-1126.54Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660468 ID=EY660468; Name=EY660468; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGCAATGATGCTATTTTACTAGTGATTATTCCCGCTGCCCA
AGCGCCTGAAATTGCTTCATCTCGAGCTCTTAGAGTTGCCAAGGAATTTG
ACGGAGATGGAACCAGAACTGTTGGTGTAATAAGTAAAATAGATCAAGCT
TCTGCAGACCAAAAAGCTCTTGCTGCTGTGCAGGCTCTCCTGTTAAATCA
AGGTCCACCAAAAACAGCTGACATTTCGTGGGTTGCATTAATTGGTCAAT
CAGTATCAATAGCTACTGCTCAGTCTGGATCTGAGAGCTCCTTAGAAACT
GCTTGGAGGGCAGAAAGTGAGTCTCTTAAGTCTATATTGACTGGTGCTCC
TCAGAGTAAGTTAGGCAGAATAGCATTGGTGGATGCTTTGGCTCAGCAGA
TCCGCAAGCGTATGAAAGTCCGGGTGCCAAACGTCCTCTCTGGATTACAA
GGAAAGTCTCAAATAGTTCAGGATGAGTTAGTGCGGCTTGGTGAGCAGAT
GGTCCAGAGTGCTGAGGGCACAAGATCTTTGGCTTTGGAGCTGTGTCGTG
AATTTGAGGATAAGTTTCTGAACACATTACAACTGGTGAGGGNTCTGGGT
GGAAAATGTTGCCAGTTTTGAGGGGAATTTCCGAACAGGATCAACAGCTT
TCTTTGGACAGACATTTTGATATTATAAATGTCAGAGGATTGTGTTAGAA
ACGGATGGCTATCAACATATCTNATATCCCCTGAAAAGGGTTTGAGATCT
TTGATCAAAGGTGTCCTGGAGCTTGCAAAGAACCCTCTTCGCTTTGTGGT
GATAAGTACCCCGGGTTCTGGTGGAATAGTTCTGGCTCTGCAAAGCTACA
CAGGCCTGGGAGA
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