EY660434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY660434 vs. ExPASy Swiss-Prot
Match: LSG1_MACFA (Large subunit GTPase 1 homolog OS=Macaca fascicularis GN=LSG1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12 Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 RHVIENVCKINLPKPKPYESQSRPPLALELLRAYCASRGYVASSGLPDETRAARIILKDFIDGKLPHFEMPPG 219 RHV+E IN+ KP+ E RPP + ELL AY RG++ + G PD+ R+AR ILKD+++GKL + PPG Sbjct: 481 RHVLEATYGINIIKPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPPPG 553
BLAST of EY660434 vs. ExPASy Swiss-Prot
Match: LSG1_BOVIN (Large subunit GTPase 1 homolog OS=Bos taurus GN=LSG1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.086e-12 Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 RHVIENVCKINLPKPKPYESQSRPPLALELLRAYCASRGYVASSGLPDETRAARIILKDFIDGKLPHFEMPPG 219 RHV+E I++ KP+ E RPP + ELL AY RG++ + G PD+ R+AR ILKD+++GKL + PPG Sbjct: 474 RHVLEATYGIDIIKPREDEDPRRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPPPG 546
BLAST of EY660434 vs. ExPASy Swiss-Prot
Match: LSG1_MOUSE (Large subunit GTPase 1 homolog OS=Mus musculus GN=Lsg1 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.379e-11 Identity = 54/177 (30.51%), Postives = 83/177 (46.89%), Query Frame = 1 Query: 1 RHVIENVCKINLPKPKPYESQSRPPLALELLRAYCASRGYVASSGLPDETRAARIILKDFIDGKLPHFEMPPGM-------SHEEVGMEDTQASSLLELHESDASDAEEVPAHGDRT----------TPVLEHVLDDLSSFDLANGLASKKVNVKKPSASHKQHKKPQRKKDRSWRV 480 R V+E IN+ KP+ E RPP + ELL AY RG++ + G PD+ R+AR ILKD++ GKL + PPG H+++ +E L L A+++ D+T T ++ V+ L A+ NV P K+H + KK++S R+ Sbjct: 466 RRVLEVTYGINIIKPREDEDPYRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVGGKLLYCHPPPGKDPVAFQHQHQQL-LESKVKGGELRLQPGKGRKAKQIENVVDKTFFHQENVRALTKGVQAVMGYKPGHGLVTAAAASAENV--PGKPWKKHGN-RNKKEKSRRL 638
BLAST of EY660434 vs. ExPASy Swiss-Prot
Match: LSG1_HUMAN (Large subunit GTPase 1 homolog OS=Homo sapiens GN=LSG1 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.353e-11 Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 1 RHVIENVCKINLPKPKPYESQSRPPLALELLRAYCASRGYVASSGLPDETRAARIILKDFIDGKLPHFEMPPG 219 RHV+E IN+ P+ E RPP + ELL AY RG++ + G PD+ R+AR ILKD++ GKL + PPG Sbjct: 480 RHVLEATYGINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKLLYCHPPPG 552
BLAST of EY660434 vs. ExPASy Swiss-Prot
Match: LSG1_RAT (Large subunit GTPase 1 homolog OS=Rattus norvegicus GN=Lsg1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11 Identity = 55/177 (31.07%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 1 RHVIENVCKINLPKPKPYESQSRPPLALELLRAYCASRGYVASSGLPDETRAARIILKDFIDGKLPHFEMPPGM-------SHEEVGMEDTQASSLLELHESDASDAEEVPAHGDRT----------TPVLEHVLDDLSSFDLANGLASKKVNVKKPSASHKQHKKPQRKKDRSWRV 480 R V+E IN+ KP E RPP + ELL AY RG++ + G PD+ R+AR ILKD++ GKL + PPG H ++ +E+ L L A++V D+T T ++ V+ L A+ NV P K+H + KK++S R+ Sbjct: 477 RRVLEATYGINIIKPGEDEDPYRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVRGKLLYCHPPPGKDPVAFQHQHRQL-LENKIKGEELRLQPGKTQKAKQVENVVDKTFFHQENVRALTKGVQAVMGYKPGSGLVTAAAASAENV--PGKPWKKHGN-RNKKEKSRRL 649
BLAST of EY660434 vs. ExPASy Swiss-Prot
Match: LSG1_DROME (Large subunit GTPase 1 homolog OS=Drosophila melanogaster GN=ns3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11 Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 1 RHVIENVCKINLPKPKPYESQSRPPLALELLRAYCASRGYVASSGLPDETRAARIILKDFIDGKLPHFEMPPGMSHEE 234 RHV+E+ I + KP E RPP + ELL AY +RG++ S+G PD+ R+AR +LKD+++G+L + PP + E Sbjct: 431 RHVLEDKYGIVIAKPLEGEDMERPPHSEELLLAYGYNRGFMTSNGQPDQARSARYVLKDYVNGRLLYAMSPPSVPQTE 508
BLAST of EY660434 vs. ExPASy Swiss-Prot
Match: LSG1_DANRE (Large subunit GTPase 1 homolog OS=Danio rerio GN=lsg1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11 Identity = 38/121 (31.40%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 1 RHVIENVCKINLPKPKPYESQSRPPLALELLRAYCASRGYVASSGLPDETRAARIILKDFIDGKLPHFEMPPGMSHEEVGMEDTQASSLLELHESDASDAEEVPAHGDRTTPV--LEHVLD 357 R+V+E IN+ +P+ E RPP ELL AY RG++ + G PD++R+AR +LKD++ GKL + PP ++ E+ + + + + + AE++ G + + V +E+ +D Sbjct: 462 RNVLEGTYGINIIRPREDEDPDRPPTYEELLMAYGYMRGFMTAHGQPDQSRSARYVLKDYVSGKLLYCHPPPHINPEDFQPQHAKFAMRI-------TGAEQIDGSGGKPSKVKRIENTVD 575 The following BLAST results are available for this feature:
BLAST of EY660434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660434 ID=EY660434; Name=EY660434; organism=Citrus sinensis; type=EST; length=853bpback to top |