EY705831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.943e-53 Identity = 113/180 (62.78%), Postives = 126/180 (70.00%), Query Frame = 3 Query: 147 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIP--------KSSPRMERRSEKQFGSMLGLNILLRRPGIFGRPPEGHA*TILATWRGRSGLWAPVHG 662 MATSAI+QSAFAGQTAL+ NE VRK+G +GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELE IH +WAMLGALG P K + ++ Q S GL+ L G P HA +ILA W + L + G Sbjct: 1 MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYL-------GNPNLIHAQSILAVWASQVVLMGLIEG 173
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 6.726e-53 Identity = 114/180 (63.33%), Postives = 126/180 (70.00%), Query Frame = 3 Query: 147 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIP--------KSSPRMERRSEKQFGSMLGLNILLRRPGIFGRPPEGHA*TILATWRGRSGLWAPVHG 662 MATSAIQQSAFAGQTAL+QSNE V K+G GGR++MRRTVKSAP SIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE IH +WAMLGALG P K + ++ Q S GL+ L G P HA +ILA W + L V G Sbjct: 1 MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYL-------GNPNLIHAQSILAIWACQVVLMGFVEG 173
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 8.784e-53 Identity = 114/180 (63.33%), Postives = 126/180 (70.00%), Query Frame = 3 Query: 147 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIPKSSPR--------MERRSEKQFGSMLGLNILLRRPGIFGRPPEGHA*TILATWRGRSGLWAPVHG 662 MATSAIQQSAFAGQTAL+ NE VRK+G GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELE IH +WAMLGALG P+ + + ++ Q S GL+ L G P HA +ILA W + L V G Sbjct: 1 MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYL-------GNPNLIHAQSILAIWAAQVVLMGFVEG 173
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 206.453 bits (524), Expect = 1.957e-52 Identity = 110/177 (62.15%), Postives = 128/177 (72.32%), Query Frame = 3 Query: 147 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIPKSSPRMERRSEKQFGSMLGLNI---LLRRPGI--FGRPPEGHA*TILATWRGRSGLWAPVHG 662 MATS IQQSAFAGQT L+ NE VRKVG +GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE IH +WAMLGALG P+ + ++ +FG + + + G+ G P HA +ILA W + L V G Sbjct: 1 MATSTIQQSAFAGQTLLKPQNELVRKVG-GNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE----LLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEG 172
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.820e-51 Identity = 108/177 (61.02%), Postives = 124/177 (70.06%), Query Frame = 3 Query: 147 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIPKSSPRMERRSEKQFGSMLGLNI---LLRRPGI--FGRPPEGHA*TILATWRGRSGLWAPVHG 662 MATSAIQQSAF G+T LRQ NEF+RK G R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRELE IH++WAMLGALG + P + ++ +FG + + G+ G P HA +ILA W + L V G Sbjct: 1 MATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALG----CTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEG 173
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 6.295e-51 Identity = 109/177 (61.58%), Postives = 127/177 (71.75%), Query Frame = 3 Query: 147 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIPKSSPRMERRSEKQFGSMLGLNI---LLRRPGI--FGRPPEGHA*TILATWRGRSGLWAPVHG 662 MA SAIQ SAFAGQTAL+Q +E VRKVGV+DG R +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE IH++WAMLGALG P+ + ++ QFG + + G+ G P HA +ILA W + L + G Sbjct: 1 MAASAIQSSAFAGQTALKQRDELVRKVGVSDG-RFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPE----LLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEG 172
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 4.080e-50 Identity = 111/180 (61.67%), Postives = 121/180 (67.22%), Query Frame = 3 Query: 147 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIP--------KSSPRMERRSEKQFGSMLGLNILLRRPGIFGRPPEGHA*TILATWRGRSGLWAPVHG 662 MAT AIQQSAF GQ + NEF+RKVG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELE IH +WAMLGALG P K + ++ Q S GL+ L G P HA +ILA W + L V G Sbjct: 1 MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYL-------GNPNLVHAQSILAIWACQVVLMGFVEG 173
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.040e-45 Identity = 106/179 (59.22%), Postives = 123/179 (68.72%), Query Frame = 3 Query: 147 MAT-SAIQQSAFAGQTALR-QSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIPKSSPRMERRSEKQFGSMLGLNI---LLRRPGI--FGRPPEGHA*TILATWRGRSGLWAPVHG 662 MAT SAIQ S+ AGQT LR Q NE V+KVG A RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRELE IH +WAMLGALG P+ + ++ +FG + + G+ G P HA +ILA W + L + G Sbjct: 1 MATASAIQSSSLAGQTLLRPQQNELVKKVGTAQA-RITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPE----LLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEG 174
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.952e-45 Identity = 107/180 (59.44%), Postives = 122/180 (67.78%), Query Frame = 3 Query: 147 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIP--------KSSPRMERRSEKQFGSMLGLNILLRRPGIFGRPPEGHA*TILATWRGRSGLWAPVHG 662 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELE IH++WAMLGALG P K + ++ Q S GL+ L G P HA +ILA W + L V G Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYL-------GNPNLVHAQSILAIWAVQVVLMGFVEG 171
BLAST of EY705831 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.952e-45 Identity = 107/180 (59.44%), Postives = 122/180 (67.78%), Query Frame = 3 Query: 147 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEEIHTKWAMLGALG*HIP--------KSSPRMERRSEKQFGSMLGLNILLRRPGIFGRPPEGHA*TILATWRGRSGLWAPVHG 662 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELE IH++WAMLGALG P K + ++ Q S GL+ L G P HA +ILA W + L V G Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYL-------GNPNLVHAQSILAIWAVQVVLMGFVEG 171 The following BLAST results are available for this feature:
BLAST of EY705831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >EY705831 ID=EY705831; Name=EY705831; organism=Citrus sinensis; type=EST; length=968bpback to top |