EY660372

Overview
NameEY660372
Unique NameEY660372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7558 contig Csv1_Contig7558:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660372 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.046e-21
Identity = 63/182 (34.62%), Postives = 94/182 (51.65%), Query Frame = 3
Query:  183 VDAGLDSTTGVQSKDVMISPETGVKARIFLPKINGPDQKL------------PLLVHYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLG-RVFLGGDSAGANIAHYVAVQAGATKLASIKIDGLLIVHPFFGVKSR 689
            V A  +   GV S DV+I  +T + +R++ P   G    +            P++V +HGG+F   SA   +++     LV     + +SV+YR APE+  P AYDD WA L+WV + S       WL    D   R+FL GDS+G NI H VAV+A  ++   I + G ++++P FG   R
Sbjct:   53 VPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS-------WLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESR---IDVLGNILLNPMFGGTER 224          
BLAST of EY660372 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.672e-21
Identity = 61/184 (33.15%), Postives = 92/184 (50.00%), Query Frame = 3
Query:  183 VDAGLDSTTGVQSKDVMISPETGVKARIFLPKINGPDQK--------------LPLLVHYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLG-RVFLGGDSAGANIAHYVAVQAGATKLASIKIDGLLIVHPFFGVKSR 689
            V A  +   GV S DV+I     + +R++ P     +Q               +P+++ +HGG+F   SA   +++     LV     + +SV+YR APE+P P AYDD W  L WV + S       WL    D    +FL GDS+G NIAH VA++AG    + I + G ++++P FG   R
Sbjct:   53 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS-------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNER 226          
BLAST of EY660372 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20
Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = 3
Query:  300 LPLLVHYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLG-RVFLGGDSAGANIAHYVAVQAGATKLASIKIDGLLIVHPFFGVKSRMNCTST 707
            +P+L+ +HGG+F   SA   +++ F   LV+   ++ +SVDYR +PEH  P AYDD W  L WV +         WL    D    V+L GDS+G NIAH VAV+A       +K+ G +++HP FG + R     T
Sbjct:  106 VPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS-------RVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRA---TNEGVKVLGNILLHPMFGGQERTQSEKT 232          
BLAST of EY660372 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.466e-19
Identity = 59/191 (30.89%), Postives = 92/191 (48.17%), Query Frame = 3
Query:  183 VDAGLDSTTGVQSKDVMISPETGVKARIFLPKINGPDQK---------------------LPLLVHYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADL-GRVFLGGDSAGANIAHYVAVQAGATKLASIKIDGLLIVHPFFGVKSR 689
            V A      GV S D +I    G++ RI+     G  ++                      P+++ +HGG+F   SA   ++++     V  +  + +SV+YR APEH  P AYDD W  L+WV +       +P++    D   RVFL GDS+G NIAH+VAV+A       +K+ G ++++  FG   R
Sbjct:   53 VPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD---EGVKVCGNILLNAMFGGTER 233          
BLAST of EY660372 vs. ExPASy Swiss-Prot
Match: YFZ3_SCHPO (AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe GN=SPAC1039.03 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.855e-14
Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 3
Query:  246 TGVKARIFLPKINGPDQKLPLLVHYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLGGDSAGANIAHYVAVQAGAT 623
            +GV +RIF P    P+   P  + +HGG + LG+      N+F T +  QA  + ++VDYRLAPE P P   DD W  L +   +++ LG  P         ++ +GG SAG NIA  ++ +  A+
Sbjct:   82 SGVPSRIFRPHGTAPEGGWPCFLWFHGGGWVLGNINTE--NSFATHMCEQAKCVVVNVDYRLAPEDPFPACIDDGWEALLYCYENADTLGINP--------NKIAVGGSSAGGNIAAVLSHKVAAS 197          
BLAST of EY660372 vs. ExPASy Swiss-Prot
Match: LIP2_MORS1 (Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 39/101 (38.61%), Postives = 53/101 (52.48%), Query Frame = 3
Query:  309 LVHYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLGGDSAGANIAHYVAVQ 611
            ++ +HGG FC+G       + F  ++ +Q     +SVDYR+APE+P P A  D  A   W+A HS  LG  P         R+ L GDSAG  +A  VA Q
Sbjct:  161 MLFFHGGGFCIGDID--THHEFCHTVCAQTGWAVVSVDYRMAPEYPAPTALKDCLAAYAWLAEHSQSLGASP--------SRIVLSGDSAGGCLAALVAQQ 251          
BLAST of EY660372 vs. ExPASy Swiss-Prot
Match: ADCL2_HUMAN (Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 46/179 (25.70%), Postives = 87/179 (48.60%), Query Frame = 3
Query:  141 YKDGRVERYRAFPCVDAGLDSTTGVQSKDVMISPET--GVKARIFLPKINGPDQKLPLLVHYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEH-ADLGRVFLGGDSAGANIAHYVAVQAGATKLASIKIDGLLIVHP 668
            +++ R+ RY  F  +   LD T  +  + + ++  T   +  R++LPK     ++  + +++HGG FC GS+    F+       +  + + + VDYRLAP+H  P  ++D  A +++          E  L ++  D  R+ + GDS+G N+A  V  Q         KI   ++++P
Sbjct:   50 FENMRIMRYEEFISMIFRLDYTQPLSDEYITVTDTTFVDIPVRLYLPKRKSETRRRAV-IYFHGGGFCFGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQHHFPAQFEDGLAAVKFFLL-------EKILTKYGVDPTRICIAGDSSGGNLATAVTQQVQNDAEIKHKIKMQVLLYP 220          
The following BLAST results are available for this feature:
BLAST of EY660372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
GI1L3_ARATH2.046e-2134.62Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GI1L1_ARATH2.672e-2133.15Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
GI1L2_ARATH1.326e-2038.69Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
GID1_ORYSJ1.466e-1930.89Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
YFZ3_SCHPO1.855e-1434.92AB hydrolase superfamily protein C1039.03 OS=Schiz... [more]
LIP2_MORS13.867e-1238.61Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 P... [more]
ADCL2_HUMAN3.274e-1125.70Arylacetamide deacetylase-like 2 OS=Homo sapiens G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660372 ID=EY660372; Name=EY660372; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGATTACACAATCAAAGCAACTAAAAGCTTAAAAAAGAGGT
CCTCTTTTCTTTCTAATCACACACTCGAATTTAGTGATGGTTTCAAGCGA
GAGTGAAATTGCCCATGATTTCCCACCCTACTTCAAGGTTTACAAAGACG
GGCGTGTAGAGAGGTACAGGGCCTTCCCATGTGTTGACGCGGGCCTTGAC
TCAACCACCGGCGTCCAATCCAAAGATGTAATGATCTCACCGGAAACCGG
CGTCAAGGCCCGTATTTTTCTGCCCAAGATCAACGGCCCAGATCAAAAGC
TCCCCCTTCTAGTTCACTACCATGGTGGAGCATTTTGCTTGGGATCAGCC
TTTGGCGTTATGTTCAACAATTTTCTCACCTCACTTGTCTCCCAAGCCAA
CATCATCGCCATTTCCGTTGACTACAGGTTAGCCCCAGAGCACCCTCTAC
CAATTGCATACGATGACTCATGGGCCGGGCTACAATGGGTTGCGGCCCAC
TCTAATGGACTCGGGCCCGAACCATGGCTTAACGAACACGCCGATCTTGG
GCGGGTTTTTCTGGGGGGAGATAGTGCCGGAGCCAACATAGCACACTACG
TGGCAGTCCAAGCTGGCGCTACTAAATTAGCTAGCATCAAAATTGATGGG
CTGCTTATTGTGCACCCATTCTTTGGAGTAAAGAGCCGCATGAATTGTAC
NAGTACATGTGTCCGGGTAGTTCCGGATCCGATGATGACCCGAAATTGAA
TCCCGCAGTGGATCCGAATTTGAAGATATGGGCTGGGGATAAGGTGCTGG
TTTGCGTGGCAAAAAAGATGGGCTGAGAATAGAGGCGTGGCGTATTCGAG
ACTTTGGNCAAAGTGATGGGGCGGTACGTGAATTTATGA
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