EY660359

Overview
NameEY660359
Unique NameEY660359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5950 contig Csv1_Contig5950:333..1249. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660359 vs. ExPASy Swiss-Prot
Match: PANK2_ARATH (Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=1)

HSP 1 Score: 430.254 bits (1105), Expect = 7.715e-120
Identity = 225/290 (77.59%), Postives = 233/290 (80.34%), Query Frame = 3
Query:   12 EITAPVPMAPSGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKMYEPNTIDLADRSELEYWFTVLSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANXXXXXXXXXXXFQFLDAYRSIKQRENEASLAVLPDLLVELDSMSEETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFXERMLGSGDNKPSPHKRAXXXXXXXXXXXXWGCYPCQRNYXEWN*R-LFGCNSLPAL 878
            EITAPVPM PS TTGLGGFEVP S+GS LRSDASALNVGVLHLVPTLEVFPLLADPK YEPNTIDL+D+ E EYW  VLSEHLPDLVD AVASEGGT+DAKRRGDAFARAFSAHLARLMEEPAAYGKLGLAN           FQF+DAYRSIKQRENEASLAVLPDLL ELDSMSEE RLL LIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAF ERMLGSG  +P  HKRA             G  P  R +       +   NSLPAL
Sbjct:  445 EITAPVPMTPSKTTGLGGFEVPSSRGSALRSDASALNVGVLHLVPTLEVFPLLADPKTYEPNTIDLSDQGEREYWLKVLSEHLPDLVDTAVASEGGTEDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEASLAVLPDLLEELDSMSEEARLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKERMLGSGGKQPHRHKRALLFVDNSGADVILGMLPLAREFLRRGTEVVLVANSLPAL 734          
BLAST of EY660359 vs. ExPASy Swiss-Prot
Match: PANK4_MACFA (Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.034e-31
Identity = 91/287 (31.71%), Postives = 131/287 (45.64%), Query Frame = 3
Query:   42 SGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKMYEPNTIDLADRS-ELEYWFTVLSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANXXXXXXXXXXXFQFLDAYRSIKQRENEASLAVLPDLLVELDSMSEETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFXERMLGSGDNKPSPHKRAXXXXXXXXXXXXWGCYPCQRN-YXEWN*RLFGCNSLPALTIYWHG 896
            +G++GL      L      RS    L + +  L   L   PLL DP  Y P+T+DL D +   +YW T   E L  +V +AVAS+  + DA  R + F + +   L  L ++P AYG L + +           F F D Y  +KQREN  +L   P ++  LD++  E R L L++G+LA N+FDWG++A  D+             R   +RPW VD +  + +R+ G       PHK A             G +P  R         +  CNS PAL    HG
Sbjct:  384 AGSSGLMSTSPELGPAQRARSGTFDL-LEMDRLERPLVNLPLLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDTLGWEERQLALVKGLLAGNVFDWGAKAVSDVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKG------PPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHG 663          
BLAST of EY660359 vs. ExPASy Swiss-Prot
Match: PANK4_PONAB (Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.130e-31
Identity = 90/286 (31.47%), Postives = 130/286 (45.45%), Query Frame = 3
Query:   42 SGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKMYEPNTIDLADRS-ELEYWFTVLSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANXXXXXXXXXXXFQFLDAYRSIKQRENEASLAVLPDLLVELDSMSEETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFXERMLGSGDNKPSPHKRAXXXXXXXXXXXXWGCYPCQRN-YXEWN*RLFGCNSLPALTIYWH 893
            +G++GL      L      RS    L + +  L   L   PLL DP  Y P+T+DL D +   +YW T   E L  +V +AVAS+  + DA  R + F + +   L  L ++P AYG L + +           F F D Y  +KQREN  +L   P ++  LD++  E R L L++G+LA N+FDWG++A  D+             R   +RPW VD +  + +R+ G       PHK A             G +P  R         +  CNS PAL    H
Sbjct:  384 AGSSGLMSTSPELGPAQRARSGTFDL-LEMDRLERPLVNLPLLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDALGWEERQLALVKGLLAGNVFDWGAKAVSDVLESDPCFGFEEAKRKLQERPWLVDSYSEWLQRLKG------PPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTH 662          
BLAST of EY660359 vs. ExPASy Swiss-Prot
Match: PANK4_HUMAN (Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.343e-30
Identity = 89/286 (31.12%), Postives = 129/286 (45.10%), Query Frame = 3
Query:   42 SGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKMYEPNTIDLADRS-ELEYWFTVLSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANXXXXXXXXXXXFQFLDAYRSIKQRENEASLAVLPDLLVELDSMSEETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFXERMLGSGDNKPSPHKRAXXXXXXXXXXXXWGCYPCQRN-YXEWN*RLFGCNSLPALTIYWH 893
            +G++GL      L      RS    L + +  L   L   PLL DP  Y P+T+DL D +   +YW T   E L  +V +AVAS+  + DA  R + F + +   L  L ++P AYG L + +           F F D Y  +KQREN  +L   P ++  LD++  E R L L++G+LA N+FDWG++A   +             R   +RPW VD +  + +R+ G       PHK A             G +P  R         +  CNS PAL    H
Sbjct:  384 AGSSGLMSASPELGPAQRARSGTFDL-LEMDRLERPLVDLPLLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDALGWEERQLALVKGLLAGNVFDWGAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKG------PPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTH 662          
BLAST of EY660359 vs. ExPASy Swiss-Prot
Match: PANK4_MOUSE (Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.801e-29
Identity = 79/241 (32.78%), Postives = 112/241 (46.47%), Query Frame = 3
Query:  162 PLLADPKMYEPNTIDLADRS-ELEYWFTVLSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANXXXXXXXXXXXFQFLDAYRSIKQRENEASLAVLPDLLVELDSMSEETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFXERMLGSGDNKPSPHKRAXXXXXXXXXXXXWGCYPCQRN-YXEWN*RLFGCNSLPAL 878
            PLL DP  Y P+T+DL D +   +YW T   E L  +V +AVAS+  + DA  R + F + +   L  L  +P AYG L + +           F F D Y  +KQ+EN  +L     +   LDS+  E R L L++G+LA N+FDWG++A  D+             R   +RPW VD +  + +R+ G       PHK A             G +P  R         +  CNS PAL
Sbjct:  423 PLLLDPSSYVPDTVDLTDDALARQYWLTCFEEALDGVVKRAVASQPESMDAVERAEKFRQKYWGKLQTLRHQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQKENGLALKCFQSVTRSLDSLGWEERQLALVKGLLAGNVFDWGAKAVSDVLESDPQFGFEEAKRKLQERPWLVDSYTKWLQRLKG------PPHKCALIFADNSGIDIILGVFPFVRELLFRGTEVILACNSGPAL 657          
BLAST of EY660359 vs. ExPASy Swiss-Prot
Match: PANK4_RAT (Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 79/241 (32.78%), Postives = 112/241 (46.47%), Query Frame = 3
Query:  162 PLLADPKMYEPNTIDLADRS-ELEYWFTVLSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANXXXXXXXXXXXFQFLDAYRSIKQRENEASLAVLPDLLVELDSMSEETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFXERMLGSGDNKPSPHKRAXXXXXXXXXXXXWGCYPCQRNYXEWN*R-LFGCNSLPAL 878
            PLL DP  Y P+T+DL D +   +YW T   E L  +V +AVAS+  + DA  R + F + +   L  L  +P AYG L + +           F F D Y  +KQ+EN  +L     +   LDS+  E R L L++G+LA N+FDWG++A  D+             R   +RPW VD +  + +R+ G       PHK A             G +P  R         +  CNS PAL
Sbjct:  423 PLLLDPSSYVPDTVDLTDDALARQYWLTCFEEALDGVVKRAVASQPESVDAAERAEKFRQKYWGKLQTLRHQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQKENGLALKCFQSVTRSLDSLGWEERQLALVKGLLAGNVFDWGAKAVSDVLESDPQFGFEEAKRKLQERPWLVDSYTKWLQRLKG------PPHKCALIFADNSGIDIILGVFPFVRELLCRGIEVILACNSGPAL 657          
The following BLAST results are available for this feature:
BLAST of EY660359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PANK2_ARATH7.715e-12077.59Pantothenate kinase 2 OS=Arabidopsis thaliana GN=A... [more]
PANK4_MACFA1.034e-3131.71Pantothenate kinase 4 OS=Macaca fascicularis GN=PA... [more]
PANK4_PONAB5.130e-3131.47Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=... [more]
PANK4_HUMAN4.343e-3031.12Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=... [more]
PANK4_MOUSE4.801e-2932.78Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=... [more]
PANK4_RAT6.271e-2932.78Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660359 ID=EY660359; Name=EY660359; organism=Citrus sinensis; type=EST; length=917bp
CCACGCGTCCGGAGATTACTGCTCCTGTACCTATGGCTCCATCTGGAACC
ACTGGACTTGGAGGCTTTGAAGTTCCTCTATCCAAAGGCAGCACTTTGCG
TTCTGATGCAAGTGCGTTAAACGTTGGAGTTCTTCATCTAGTACCCACTT
TGGAAGTGTTTCCTCTGCTAGCCGACCCCAAAATGTATGAGCCTAACACC
ATTGATCTCGCAGATCGCAGCGAGTTAGAGTATTGGTTCACTGTGCTGTC
AGAGCATTTACCAGACCTTGTGGATAAGGCAGTGGCAAGTGAAGGTGGAA
CTGATGATGCTAAAAGAAGGGGTGATGCATTTGCTCGTGCATTTTCTGCT
CACTTGGCAAGGTTGATGGAGGAGCCTGCTGCTTATGGAAAGTTGGGCTT
GGCCAATCTTTTGGAATTAAGGGAAGAATGCTTGAGGGAGTTCCAATTTC
TTGATGCCTATAGAAGCATAAAGCAGAGGGAAAATGAGGCATCACTTGCT
GTTTTACCTGACTTGTTGGTGGAACTTGACAGTATGAGTGAGGAGACAAG
ACTGCTTATGCTTATTGAGGGCGTTCTTGCCGCAAACATATTTGACTGGG
GATCCCGTGCCTGTGTGGATCTCTATCACAAAGGGACAATTATTGAAATT
TACAGAATGAGTCGCAATAAAATGCAAAGACCTTGGCGGGTGGATGATTT
TGATGCCTTCANGGAGAGAATGCTAGGGTCTGGTGACAACAAGCCCTCGC
CACATAAGAGAGCTTTACTGTTTGTGGACACTCTGGTGCTGATNGTGTTC
TGGGGATGCTACCCCTGCCAAAGGAACTACTANGAGTGGAACTGAAGGTT
GTTTGGTTGCAACTCCCTCCCTGCACTAACGATATACTGGCATGGAGCTC
CCGATATGTAGCTGAGG
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