EY660347

Overview
NameEY660347
Unique NameEY660347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660347 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.303e-31
Identity = 88/175 (50.29%), Postives = 101/175 (57.71%), Query Frame = 2
Query:  356 MGYLNSVLSSSSQVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIXXXXXXXXXXXXHELLSM*TQ---------PLQQSDQASKVHI*YQIGNS*CIQPHRLGISEVRKHQNRDAGSTAXTAIPGGDRLLGANV-VTPDC*CXGGMLLPIARSKQTNR 850
            MGYLNSVLSSSSQVH+DD P SGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEI                    Q         P   SD  + +   Y   +S  ++            QNRDAGSTA TAI  GDRLL ANV  +    C GG  + ++R  + ++
Sbjct:    1 MGYLNSVLSSSSQVHSDDGPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTTAAIADAYNQTDSEFLKS--------ENSQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQ 167          
BLAST of EY660347 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.224e-24
Identity = 82/194 (42.27%), Postives = 104/194 (53.61%), Query Frame = 2
Query:  356 MGYLNSVLSSSSQVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEI---------XXXXXXXXXXXXHELLSM*TQPLQQSDQASKVHI*YQIGNS*CIQPHRLGISEVRKHQN---RDAGSTAXTAIPGGDRLLGANV-VTPDC*CXGGMLLPIARSKQTNR*RHGLRCQRV---VMW 889
            MGY++  LS S+Q+   ++PASGGGLSQNGKFSYGYASS GKRSSMEDF+ETRIDG++GEI                     H   ++ T P   SD  S +   Y   +           SE+ K +N   RDAGSTA TAI  GDRLL ANV  +    C GG    ++R  + ++     R +     VMW
Sbjct:    1 MGYMDLALSYSNQMRIVEAPASGGGLSQNGKFSYGYASSAGKRSSMEDFFETRIDGIDGEIVGLFGVFDGHGGSRAAEYVKRHLFSNLITHPKFISDTKSAIADAYTHTD-----------SELLKSENSHTRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAFAVSRDHKPDQSDERERIENAGGFVMW 183          
BLAST of EY660347 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.650e-24
Identity = 72/151 (47.68%), Postives = 85/151 (56.29%), Query Frame = 2
Query:  356 MGYLNSVLSSSSQVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEI---------XXXXXXXXXXXXHELLSM*TQPLQQSDQASKVHI*YQIGNS*CIQPHRLGISEVRKHQNRDAGSTAXTAIPGGDRLLGANV 781
            MGYL+  LS S+Q    ++PASGGGLSQNGKFSYGYASS GKRSSMEDF+ETRIDG+ GEI                     H   ++ T P   SD  S +   Y   +S         + +     NRDAGSTA TAI  GDRL+ ANV
Sbjct:    1 MGYLDLALSYSNQPQTVEAPASGGGLSQNGKFSYGYASSAGKRSSMEDFFETRIDGINGEIVGLFGVFDGHGGARAAEYVKRHLFSNLITHPKFISDTKSAITDAYNHTDS--------ELLKSENSHNRDAGSTASTAILVGDRLVVANV 143          
BLAST of EY660347 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 67/159 (42.14%), Postives = 83/159 (52.20%), Query Frame = 2
Query:  404 DDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEI---------XXXXXXXXXXXXHELLSM*TQPLQQSDQASKVHI*YQIGNS*CIQPHRLGISEVRKHQNRDAGSTAXTAIPGGDRLLGANV-VTPDC*CXGGMLLPIARSKQTNR 850
            D SP SGGGLS+NGKFSYGYAS+PGKR+SMEDFYETRIDGV+GE                      H   ++   P   SD  S +   Y   +S           +      RDAGSTA TAI  GDRLL ANV  +    C GG  + ++R  + ++
Sbjct:   66 DCSPVSGGGLSENGKFSYGYASAPGKRASMEDFYETRIDGVDGETIGLFGVFDGHGGARAAEYVKQHLFSNLIKHPKFISDIKSAIAETYNHTDS--------EFLKAESSHTRDAGSTASTAILVGDRLLVANVGDSRAVVCRGGDAIAVSRDHKPDQ 216          
BLAST of EY660347 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19
Identity = 68/160 (42.50%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  401 ADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIXXXXXXXXXXXXHELLSM*TQ---------PLQQSDQASKVHI*YQIGNS*CIQPHRLGISEVRKHQNRDAGSTAXTAIPGGDRLLGANV-VTPDC*CXGGMLLPIARSKQTNR 850
            A  SP SGGG S NGKFSYGYASSPGKRSSMEDFY+TRIDGV+GE                     Q         P   SD  S +   Y   +S         + +     NRDAGSTA TAI  GDRLL ANV  +    C GG  + ++R  + ++
Sbjct:   47 AAGSPGSGGGFSANGKFSYGYASSPGKRSSMEDFYDTRIDGVDGETVGLFGVFDGHGGARAAEFVKQNLFTNLIKHPKLFSDTKSAIAETYTSTDS--------ELLKAETSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGDAIAVSRDHKPDQ 198          
BLAST of EY660347 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.883e-19
Identity = 69/175 (39.43%), Postives = 94/175 (53.71%), Query Frame = 2
Query:  356 MGYLNSVLSSSSQVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIXXXXXXXXXXXXHELLSM*TQ---------PLQQSDQASKVHI*YQIGNS*CIQPHRLGISEVRKHQNRDAGSTAXTAIPGGDRLLGANV-VTPDC*CXGGMLLPIARSKQTNR 850
            MGYL+SV+ +      D SP SGGGLSQNGKFSYGYASSPGKR+SMEDFYETRID V+G+I             ++     Q         P   SD    +   Y+  +S  ++      S+  ++Q    GSTA TA+  GDRL  ANV  +    C GG  + +++  + ++
Sbjct:    1 MGYLSSVIPT------DGSPVSGGGLSQNGKFSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLE------SDSSQNQ---CGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQ 160          
BLAST of EY660347 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 4.103e-16
Identity = 20/38 (52.63%), Postives = 32/38 (84.21%), Query Frame = 3
Query:  594 EHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSEN 707
            + NLF NL++HP+F++DTK AI++ Y  TD++FL+SE+
Sbjct:  159 KENLFENLLKHPEFLTDTKLAISETYQKTDTDFLESES 196          

HSP 2 Score: 45.0542 bits (105), Expect = 4.103e-16
Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 2
Query:  416 ASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGE 535
            ASGG   ++GK   GY+S  GKR++MEDFY+ ++  ++G+
Sbjct:   99 ASGGWAREDGKLKCGYSSFRGKRATMEDFYDVKLTEIDGQ 138          

HSP 3 Score: 28.8758 bits (63), Expect = 4.103e-16
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  556 FDGHGGARAAEYV 594
            FDGHGG RAAEY+
Sbjct:  146 FDGHGGPRAAEYL 158          
The following BLAST results are available for this feature:
BLAST of EY660347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
P2C59_ARATH2.303e-3150.29Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C71_ARATH1.224e-2442.27Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C69_ARATH4.650e-2447.68Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C10_ORYSJ1.185e-1942.14Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C59_ORYSJ1.548e-1942.50Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C45_ORYSJ5.883e-1939.43Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C13_ORYSJ4.103e-1652.63Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660347 ID=EY660347; Name=EY660347; organism=Citrus sinensis; type=EST; length=917bp
CCACGCGTCCGCGGACGCGTGGGCTGAAACAAAAGAAATGAATCACTATT
GAATTCATCATCGTCGTCATAGTCTCTCTTTCTAAAACTTCCTCTCTCGT
CTTTTTCTTCTTTGTAACGCGTTTTAAACGCGCCGTATCTTTTCTTTTAT
TTTCTTTTTCTCTGTTATGGCATTTCTTTTCACTTCTCTTCTTCAGGTTG
AGCTTGATAATTCGTGACATTGAAATGATCTAACGAATGTGCAATCACCT
ATTGTAACTAACCAAAACGCTGTCGCTGCTGTAGTTATTGCTTTCGTTGT
TATTAATTTATTTTCTCTTCCGAGTGGTTAACGAATTGGAACTTGAAGCG
AAACCATGGGGTATTTGAACTCGGTGTTGTCATCTTCAAGCCAGGTTCAC
GCCGATGATTCGCCGGCTAGCGGCGGGGGCCTTAGTCAGAACGGAAAGTT
CAGCTACGGATATGCGAGTTCTCCTGGCAAGAGGTCTTCTATGGAAGATT
TTTATGAGACCAGAATTGATGGCGTCGAAGGAGAGATAGTAGGCCTCTTT
GGAGTTTTGATGGTCATGGGGGTGCACGAGCTGCTGAGTATGTGAACACA
ACCTCTTCAGCAATCTGATCAGGCATCCAAAGTTCATATCTGATACCAAA
TCGGCAATAGCTGATGCATACAGCCACACAGACTCGGAATTTCTGAAGTC
AGAAAACATCAAAACAGGGATGCTGGATCTACTGCTTNCACTGCCATCCC
TGGTGGTGATCGCTTACTTGGTGCAAATGTGGTGACTCCAGACTGTTAAT
GCANGGGCGGTATGCTATTGCCGATCGCGAGATCCAAACAGACCAACAGA
TGACGTCACGGATTGAGATGCCAGAGGGTTGTGATGTGGCTGAACTTGAA
AGTGGAAGAGTCTTGCC
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