EY705788

Overview
NameEY705788
Unique NameEY705788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH20_ARATH (Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.862e-37
Identity = 79/116 (68.10%), Postives = 90/116 (77.59%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSELXXXXXXXXXXXXXXXGINLTEKSV 358
            EK+ QEL  SE+DGPVS+VF KTL  FISVAE EVA+V++LYSV GRNADALA YFGEDP RCPFEQVTATLLNF+RLF+KAHEENVKQ+EL               G+NLT+K V
Sbjct: 1497 EKLNQELTASESDGPVSDVFRKTLGDFISVAETEVATVSSLYSVVGRNADALAHYFGEDPNRCPFEQVTATLLNFIRLFKKAHEENVKQAELEKKKALKEAEMEKAKGVNLTKKPV 1612          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH6_ORYSJ (Formin-like protein 6 OS=Oryza sativa subsp. japonica GN=FH6 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.134e-31
Identity = 68/92 (73.91%), Postives = 76/92 (82.61%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSEL 286
            EKV QEL  SENDGPVSE+F KTLK F+S AE EV S+T+LYS  GRNADALALYFGEDPARCPFEQV  TL NFVRLF ++H+EN KQ +L
Sbjct: 1218 EKVEQELTTSENDGPVSEIFRKTLKDFLSGAEAEVRSLTSLYSNVGRNADALALYFGEDPARCPFEQVVITLQNFVRLFVRSHDENCKQLDL 1309          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH12_ORYSJ (Formin-like protein 12 OS=Oryza sativa subsp. japonica GN=FH12 PE=3 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 6.878e-29
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSE 283
            +KV QEL  SE+DGPVSEVF KTLK F   +  +V S++ LY+  G++ADALA YFGEDPA+CPFEQVT+TLLNFV LFRKAHEEN+KQ E
Sbjct: 1542 QKVEQELAASESDGPVSEVFRKTLKEFTDASGADVRSLSALYAEVGKSADALAYYFGEDPAKCPFEQVTSTLLNFVGLFRKAHEENIKQIE 1632          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH13_ARATH (Formin-like protein 13 OS=Arabidopsis thaliana GN=FH13 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28
Identity = 62/91 (68.13%), Postives = 70/91 (76.92%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSE 283
            EKV QEL +SENDGP+S  F K LK F+  AE EV S+ +LYS  GRN D L LYFGEDPA+CPFEQV +TLLNFVRLF +AHEEN KQ E
Sbjct: 1122 EKVVQELSLSENDGPISHNFNKILKEFLHYAEAEVRSLASLYSGVGRNVDGLILYFGEDPAKCPFEQVVSTLLNFVRLFNRAHEENGKQLE 1212          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH15B_ARATH (Putative formin-like protein 15b OS=Arabidopsis thaliana GN=FH15B PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28
Identity = 61/92 (66.30%), Postives = 79/92 (85.87%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSEL 286
            EK+ ++L  SE+DGPVS+VF K LK FIS+AE +VA+V++LYS +G+NADALA YFGEDP   PFE+VT TLL+F+RLF+KAHEENVKQ++L
Sbjct:  247 EKLNKQLTASESDGPVSQVFRKVLKDFISMAETQVATVSSLYS-SGKNADALAHYFGEDPNHYPFEKVTTTLLSFIRLFKKAHEENVKQADL 337          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH16_ARATH (Formin-like protein 16 OS=Arabidopsis thaliana GN=FH16 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27
Identity = 62/92 (67.39%), Postives = 75/92 (81.52%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSEL 286
            EK++QEL  SE DGPVS+VF K LK FIS AE +VA+V+ LYS A  NADALA YFGEDP   PFE+V+ATLL+F+RLF+KAH+ENVKQ +L
Sbjct:  467 EKLKQELTASETDGPVSQVFRKLLKDFISSAETQVATVSTLYSSARINADALAHYFGEDPNHYPFEKVSATLLSFIRLFKKAHQENVKQEDL 558          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH21B_ARATH (Formin-like protein 21b OS=Arabidopsis thaliana GN=FH21B PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26
Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLF-RKAHEENVKQSEL 286
            +K+ QEL  SE+DGP+SEVF K LK FISVAE +VA+V++LYS  G N DAL  YFGEDP   PFEQVTATLL+FVRLF   AH+ENVKQ+EL
Sbjct:  275 QKLNQELTASESDGPISEVFRKLLKDFISVAETQVATVSSLYSSVGGNTDALVHYFGEDPNDYPFEQVTATLLSFVRLFTTAAHQENVKQAEL 367          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH7_ORYSJ (Formin-like protein 7 OS=Oryza sativa subsp. japonica GN=FH7 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25
Identity = 56/92 (60.87%), Postives = 70/92 (76.09%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSEL 286
            EKV QEL  SE DGP SE+F K LK F++ A+ E  S+  LYS AG++AD+LA YFGEDP RCPFEQV +TLL+FV+ F +AH EN++Q EL
Sbjct: 1268 EKVEQELTTSEKDGPGSEIFYKKLKEFLADAQAEGRSLAFLYSTAGKSADSLAHYFGEDPVRCPFEQVVSTLLSFVKTFERAHAENLRQMEL 1359          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH18_ARATH (Formin-like protein 18 OS=Arabidopsis thaliana GN=FH18 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24
Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSE 283
            EKV QE   SE DG +S+ F   LK F+SVAE EV S+ +LYS  G +ADALALYFGEDPAR PFEQV +TL NFVR+F ++HEEN KQ E
Sbjct:  998 EKVVQEFTASETDGQISKHFRMNLKEFLSVAEGEVRSLASLYSTVGGSADALALYFGEDPARVPFEQVVSTLQNFVRIFVRSHEENCKQVE 1088          
BLAST of EY705788 vs. ExPASy Swiss-Prot
Match: FH5_ORYSJ (Formin-like protein 5 OS=Oryza sativa subsp. japonica GN=FH5 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 2
Query:   11 EKVRQELVMSENDGPVSEVFCKTLKGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSEL 286
            EKV+ E   SE+DGPVSE+F + LK F   A  +V S+++L+S  G+ ADAL  YFGEDP RCPFEQV +TLL FV +FRKAHEEN KQ+EL
Sbjct: 1484 EKVQLEYNASESDGPVSEIFREKLKEFTDNAGADVQSLSSLFSEVGKKADALIKYFGEDPVRCPFEQVISTLLTFVTMFRKAHEENRKQAEL 1575          
The following BLAST results are available for this feature:
BLAST of EY705788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
FH20_ARATH6.862e-3768.10Formin-like protein 20 OS=Arabidopsis thaliana GN=... [more]
FH6_ORYSJ1.134e-3173.91Formin-like protein 6 OS=Oryza sativa subsp. japon... [more]
FH12_ORYSJ6.878e-2968.13Formin-like protein 12 OS=Oryza sativa subsp. japo... [more]
FH13_ARATH4.458e-2868.13Formin-like protein 13 OS=Arabidopsis thaliana GN=... [more]
FH15B_ARATH9.931e-2866.30Putative formin-like protein 15b OS=Arabidopsis th... [more]
FH16_ARATH1.297e-2767.39Formin-like protein 16 OS=Arabidopsis thaliana GN=... [more]
FH21B_ARATH1.098e-2667.74Formin-like protein 21b OS=Arabidopsis thaliana GN... [more]
FH7_ORYSJ2.705e-2560.87Formin-like protein 7 OS=Oryza sativa subsp. japon... [more]
FH18_ARATH1.753e-2463.74Formin-like protein 18 OS=Arabidopsis thaliana GN=... [more]
FH5_ORYSJ2.990e-2460.87Formin-like protein 5 OS=Oryza sativa subsp. japon... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-047-H09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705788 ID=EY705788; Name=EY705788; organism=Citrus sinensis; type=EST; length=701bp
CCACGCGTCCGAAAAGGTTAGACAGGAGCTTGTTATGTCTGAAAATGATG
GACCCGTATCTGAAGTTTTTTGTAAGACACTGAAAGGATTCATATCTGTT
GCTGAGGTTGAGGTGGCATCTGTAACAAATCTCTATTCTGTGGCGGGTAG
AAATGCAGATGCCCTTGCATTATATTTTGGTGAGGATCCTGCTCGTTGCC
CATTTGAGCAAGTTACTGCAACTCTGTTAAATTTTGTGAGGTTGTTCCGA
AAAGCACATGAAGAGAATGTGAAACAGTCTGAATTGGAGAGGAAGAAAGC
TGAGAAGGAGGCTGAGATGGAGAAGGCTAAGGGAATTAATCTTACGGAGA
AGAGTGTGAAGTTTGCTGATGGTTGACTGCTTTCTGTCTCCACATGGGAA
ATTTAGCTCCCGCCATAAAACAGAAGTCTGCCGTGATATTTTATTTGAAA
GACGGCAAAAATGCTGCTGTCATAACTTGGTGACACCTCCTGCTGGCCAG
GGGGGAAGGGATCGAAAGCCTTCGAATGGCGAAGAAAAAAAGGCGAAAAG
CCTCCGCTGTTGGGCCGGCGACACACATCCCAGATGGGAATACCGAACAG
CGGTTAACGGGATAAATGAGGAAATCACAAAGTAAAATATAAATAGTAGA
CATGTAAAAAAAGTCCTAAGTTTGGAATATAAAAAGTAATTAGTCATATA
C
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