EY705787

Overview
NameEY705787
Unique NameEY705787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.513e-65
Identity = 122/171 (71.35%), Postives = 140/171 (81.87%), Query Frame = 3
Query:   48 MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKD-------------DKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            MS+ +KITLKSSDGE FE++E VALESQTIKHM+EDDC D  IPLPNVTS ILSKVIEYCK+HVEA    +                 S+++DLKTWD++F+KVDQ TLFDL+LAANYLNI+GLLDLTCQTVADMIKGKTPEEIRKTFNIKNDF+P+EEEEV REN WAF+
Sbjct:    1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.294e-63
Identity = 118/159 (74.21%), Postives = 136/159 (85.53%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDK---STEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            S KKI LKSSDGE+FEVEE VALESQTI HMVEDDC D  +PLPNVTS IL+KVIEYCK+HVEA +   +  +   +++DDLK WDADF+K+DQ TLF+L+LAANYLNI+ LLDLTCQTVADMIKGKTPEEIR TFNIKNDF+P+EEEEV REN WAF+
Sbjct:    2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.580e-57
Identity = 110/160 (68.75%), Postives = 132/160 (82.50%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGS---GDKKDDKSTE-DDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            ++K I LKSSDGE+FE+EE VA++SQTIKHM+EDDCAD  IPLPNVT  IL+KVIEYCKKHVEA +   GDK    S E D+LK WD++FVKVDQ TLFDL+LAANYLNI GLLDLTC+ VAD ++GKTPE++R  FNIKND++P+EE EV  EN WAF+
Sbjct:    4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.282e-56
Identity = 110/160 (68.75%), Postives = 130/160 (81.25%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGS---GDKKDDKSTED-DLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            ++K I LKSSDGE+FEVEE VA+ESQTIKHM+EDDC D  IPLPNVT  IL+KVIEYCKKHVEA +   GDK    STE+ +LKTWD DFVKVD  TLFDL+ AANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND++P+EE EV  EN WAF+
Sbjct:    4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.770e-51
Identity = 100/156 (64.10%), Postives = 121/156 (77.56%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            S K I L SSDG++FEVEE VA++SQTI HMVEDDC    IPL NV S IL KVIEYCKKH        + +  +E+DL  WD  F+ ++Q+T+F+L+LAANYLNI+ LLDLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE V +EN WAF+
Sbjct:    2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHV-----DEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.871e-50
Identity = 100/157 (63.69%), Postives = 121/157 (77.07%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK-HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            S K I L SSDG++FEVEE VA++SQTI HMVEDDC    IPL NV S IL KVIEYCKK HV+  +        +E+DL  WD  F+ ++Q+T+F+L+LAANYLNI+ L DLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE V +EN WAF+
Sbjct:    2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVDEAN------PISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.135e-47
Identity = 93/156 (59.62%), Postives = 120/156 (76.92%), Query Frame = 3
Query:   60 KKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKV--DQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            K + L SSDGE+F+VEE VA++SQTI HM+EDDC    +P+ NVT  ILSKVIEYCKKHV + S  ++    ++D+LK WDA+F+K     +TLFD++LAANYLNI+ LLDL CQTVADMI GK P+EIR    I+NDF+P+EEEE+ +EN WAF+
Sbjct:    3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTEE----SKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.652e-46
Identity = 95/157 (60.51%), Postives = 118/157 (75.16%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPWAFQ 521
            S  KI L SSDGE+FEVEE VA + + ++HM+EDDC  T +PL NVT  ILS V+EYCKKHV        D++S  D+ KTWD +F+K  DQ T+F L+LAANYLNI+GLLDL+ QTVAD IK KTPEEIR+ FNI+NDF+P+EE  V +EN WAF+
Sbjct:    2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHVV-------DEES--DEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 8.135e-46
Identity = 94/166 (56.63%), Postives = 118/166 (71.08%), Query Frame = 3
Query:   54 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGD--------KKDDKSTEDDLKTWDADFVK-VDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE-VPRENPWAFQ 521
            S  KI L SSDGE+F+VEE VA + Q +KH++EDDC    IPL NVT  ILS V+EYCKKHV+    D        KK D   + +L  WDA+F+K +D  T+F L+LAANYLN+ GLL LTCQTVAD IK KTPEE+R+ FNI+NDF+ +EEEE + +EN WAF+
Sbjct:    2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167          
BLAST of EY705787 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.091e-45
Identity = 90/152 (59.21%), Postives = 120/152 (78.95%), Query Frame = 3
Query:   66 ITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVEAGS--GDKKDDKSTEDDLKTWDADFVKVDQNTLFDLVLAANYLNIRGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVPRENPW 512
            + L+SSD + FE+E+ +A  S TIK+M+ED   +D+ IPLPNVTSTIL KV++YC+ H +  S  GD K D+   DD+  +D DF KVDQ TLF+L+LAANYL+I+ LLD+TC+TVA+MI+GKTPEEIRK FNIKNDF+P+EEE++ +EN W
Sbjct:    4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155          
The following BLAST results are available for this feature:
BLAST of EY705787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SKP1B_ARATH3.513e-6571.35SKP1-like protein 1B OS=Arabidopsis thaliana GN=SK... [more]
SKP1A_ARATH4.294e-6374.21SKP1-like protein 1A OS=Arabidopsis thaliana GN=SK... [more]
ASK4_ARATH1.580e-5768.75SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK... [more]
ASK3_ARATH2.282e-5668.75SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK... [more]
ASK11_ARATH3.770e-5164.10SKP1-like protein 11 OS=Arabidopsis thaliana GN=AS... [more]
ASK12_ARATH1.871e-5063.69SKP1-like protein 12 OS=Arabidopsis thaliana GN=AS... [more]
ASK13_ARATH1.135e-4759.62SKP1-like protein 13 OS=Arabidopsis thaliana GN=AS... [more]
ASK14_ARATH3.652e-4660.51SKP1-like protein 14 OS=Arabidopsis thaliana GN=AS... [more]
ASK15_ARATH8.135e-4656.63SKP1-like protein 15 OS=Arabidopsis thaliana GN=AS... [more]
SKP1A_DICDI3.091e-4559.21SCF ubiquitin ligase complex protein SKP1a OS=Dict... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-047-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705787 ID=EY705787; Name=EY705787; organism=Citrus sinensis; type=EST; length=825bp
CCACGCGTCCGAAATAGCTTTAGCGAAAACCGTAACTCTCAGAAACGATG
TCGTCTGAGAAGAAGATCACTCTGAAGAGTTCGGACGGTGAGACGTTCGA
GGTGGAGGAGACGGTGGCCCTCGAGTCGCAGACAATCAAGCACATGGTGG
AGGACGACTGCGCCGACACCGTAATCCCGCTGCCGAATGTGACGAGCACG
ATTCTCTCGAAGGTTATCGAGTACTGCAAGAAGCACGTTGAGGCTGGGTC
AGGGGACAAGAAGGACGACAAGTCGACCGAGGATGATCTCAAGACCTGGG
ATGCAGACTTCGTCAAGGTTGATCAGAATACCCTCTTTGACCTAGTCTTG
GCCGCCAATTACCTGAACATTAGGGGTTTGCTGGACTTGACCTGCCAAAC
TGTTGCAGACATGATCAAGGGGAAGACTCCAGAGGAGATCCGCAAGACCT
TCAACATCAAGAATGACTTCTCTCCCGATGAGGAAGAGGAGGTTCCGAGA
GAGAACCCTTGGGCTTTCCAGTGAAGGACTGAAGTGATGAAGGCTCGGAA
TTAATATTTGTGAGAGGAATGCGGTTCATGATGGGGGGCTTTAGGTGGGT
GCAGTAGGCGCCAGTGTTGGACCGGGAGTTCGCCTTTGGGGGAGACTGGG
GAGTGTGGCGGAGTAGAGGTGCGTGAACGCCTGAGGATGGAGTATAGCTG
CGGCTTTGCCCCGCCGAAAGAAAACAGGGAAAGGGGGGGCGCCTTGCGGG
AGATGGAGCGTCGGGCGCGCGGGGTGGCGGGAGTGTTTGTGGAGTGGAGG
CTATGAGGATTTGTGCCGCATTTAT
back to top