EY660214

Overview
NameEY660214
Unique NameEY660214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: SGAT_ARATH (Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2)

HSP 1 Score: 413.69 bits (1062), Expect = 6.998e-115
Identity = 203/258 (78.68%), Postives = 225/258 (87.21%), Query Frame = 1
Query:  106 MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMXDCCASPQALEASKTAKSGRVFFDGKTT*SL-QLGKFLAYTPSFNYCMG 876
            MDYMY PG++HLFVPGPV+IP+ VIRAMNRNNEDYRSPA+PALTKTLLED+KKIFKTTSGTPFL PTTGTGAWESALTNTLSPGDRI+SFLIGQFSLLWIDQQ+RLNFNVDVVESDWG+GA L VLASKL+ D  HTI AICIVHNETATGVTN++S VR LLD Y+HPAL LVDGVSSICA+DFRMDEWG+DVALTGSQKALSLPTG+   CASP+ALEA+KT+KS +VFFD        +LG +  YTPS     G
Sbjct:    1 MDYMYGPGRHHLFVPGPVNIPEPVIRAMNRNNEDYRSPAIPALTKTLLEDVKKIFKTTSGTPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQKRLNFNVDVVESDWGQGANLQVLASKLSQDENHTIKAICIVHNETATGVTNDISAVRTLLDHYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEATKTSKSLKVFFDWNDYLKFYKLGTYWPYTPSIQLLYG 258          
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: SGAA_METEA (Serine--glyoxylate aminotransferase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=sgaA PE=3 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.581e-66
Identity = 127/249 (51.00%), Postives = 166/249 (66.67%), Query Frame = 1
Query:  124 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMXDCCASPQALEAS-----KTAKSGRVFFDGKTT*SLQLGKFLAYTP 855
            PG+NHLFVPGP +IPD+V+RAM   +ED+RS   P+LTK L ED KK+F +T GT FL P +GTG WESAL+NTL+ GD++++   GQFS LWID  QRL  +V V E +WG GAK + +   L AD  H I A+ +VHNETATGVT+N+  VRK +D   HPAL  VDGVSSI ++ F+ DEW +D A+ GSQK L LP G+   C S +AL+A+     +  +  RV+FD +         +  YTP
Sbjct:    7 PGRNHLFVPGPTNIPDRVMRAMMVQSEDHRSVDFPSLTKPLFEDTKKVFGSTEGTIFLFPASGTGIWESALSNTLARGDKVLAARFGQFSHLWIDMAQRLGLDVVVQEEEWGTGAKPEKIEEALRADKNHEIKAVMVVHNETATGVTSNIGAVRKAIDAAGHPALLFVDGVSSIGSLPFKADEWKVDCAIAGSQKGLMLPAGLGVICVSQKALKAAEGQSGRNDRLARVYFDWEDQKKQNPTGYFPYTP 255          
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: SGAA_HYPME (Serine--glyoxylate aminotransferase OS=Hyphomicrobium methylovorum GN=sgaA PE=3 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 2.888e-60
Identity = 116/249 (46.59%), Postives = 155/249 (62.25%), Query Frame = 1
Query:  136 HLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMXDCCASPQALE--ASKTAKSGRVFFDGKTT*SLQLGKFLAYTPSFNYCMG 876
            HLF+PGP +IPD V  AMN   ED RSP  P  T  L ED+KK FK   G  F+ P++GTGAWESA+ NTL+ GD+++    GQFSLLW+D  +RL   V+V + +WG G  ++  A  LA D  H I A+ + HNETATGV+++++ VRK LD  +HPAL +VDGVSS+ ++D RM EWG+D  ++GSQK   LPTG+     S +AL+   SK  +  R FF  +         F  YTP+     G
Sbjct:    6 HLFIPGPTNIPDAVRMAMNIPMEDMRSPEFPKFTLPLFEDLKKAFKMKDGRVFIFPSSGTGAWESAVENTLATGDKVLMSRFGQFSLLWVDMCERLGLKVEVCDEEWGTGVPVEKYADILAKDKNHEIKAVFVTHNETATGVSSDVAGVRKALDAAKHPALLMVDGVSSVGSLDMRMGEWGVDCCVSGSQKGFMLPTGLGILAVSQKALDINKSKNGRMNRCFFSFEDMIKTNDQGFFPYTPATQLLRG 254          
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: DHSS_ANACY (Soluble hydrogenase 42 kDa subunit OS=Anabaena cylindrica PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.493e-32
Identity = 76/222 (34.23%), Postives = 126/222 (56.76%), Query Frame = 1
Query:  139 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMXDCCASPQALEASKTAKSGRVFFD 804
            L +PGP  +P+  + A+ ++   +R+     +   + +++K + +T S    ++  +GTGA E+ + N LSPGDRI+    G+F   W++  Q    NV+ + ++WG+    D  A KL ADT   I A+ I H+ET+TGV N+L  +   + ++   AL +VD V+S+ A +  +D  G+DV  +GSQK   +P G+     SP+A EA KTAK  + + D
Sbjct:    7 LMIPGPTPVPEAALLALAKHPIGHRTSEFSNMMGEVTQNLKWLHQTESDV-LMLNVSGTGAVEAGMINFLSPGDRILVGSNGKFGERWVEVGQAFGLNVEAITAEWGQPLDPDKFAQKLQADTNKEIKAVIITHSETSTGVINDLVAINSHVKEHGQ-ALIIVDAVTSLGAYNVPVDALGLDVVASGSQKGYMIPPGLGFVSVSPKAWEAYKTAKLPKYYLD 226          
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: DHSS_SYNP1 (Soluble hydrogenase, small subunit OS=Synechococcus sp. (strain PCC 6716) PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.599e-26
Identity = 67/225 (29.78%), Postives = 116/225 (51.56%), Query Frame = 1
Query:  130 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMXDCCASPQALEASKTAKSGRVFFD 804
            K  L +PGP  +P+ V+ ++ ++   +RS     +   +   IK + +T +    ++  +GTGA E+ + N LS GDR++    G+F   W +         + + + WG+    D   + L         A+ + H+ET+TGV N+L  + + +  +   AL +VD V+S+ A+   +DEWG+DV  +GSQK   +P G+     SP+A EA KTA   + + D
Sbjct:    4 KAMLMIPGPTPVPESVLLSLGKHPIGHRSGEFSQIMAAMTAGIKWLHQTQNEV-LILAASGTGAMEAGIINFLSAGDRVVVGCNGKFGDRWGEVCDAYGLTTERISAPWGQPLNPDDFKAVLDGHRQKPSKAVIVTHSETSTGVINDLEAINRHVKAHGQ-ALIIVDAVTSLGAVSVPIDEWGLDVVGSGSQKGYMIPPGLAFVSVSPKAWEAYKTATLPKFYLD 226          
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: Y959_METJA (Uncharacterized aminotransferase MJ0959 OS=Methanocaldococcus jannaschii GN=MJ0959 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.939e-25
Identity = 69/215 (32.09%), Postives = 119/215 (55.35%), Query Frame = 1
Query:  130 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMXDCCASPQALEASK 774
            K  L +PGP  +P +V+ AM      +R+     L +  +E +KK+F T + T FLI  +GT A + A++N +  GD++++ + G F   + +  +        ++ +WG+ A+ +  A K   D    I A+ +VHNET+TG  N + ++ +++ DY   AL++VD VSS+      +D++ ID+ +TGSQK L+ P G+     S +A E  K
Sbjct:    7 KKLLMIPGPTMVPPEVLNAMALPVIGHRTKDYSNLLEDTIEKLKKVFITENDT-FLITGSGTAAMDMAISNIIKRGDKVLNIVTGNFGERFANIVKAYKGEAIRLDVEWGDMAEPE--AVKEILDKYDDIKAVTVVHNETSTGARNPIKEIGEVVKDY--DALYIVDTVSSLGGDYVNVDKFHIDICVTGSQKCLAAPPGLAAITVSEKAWEVIK 216          
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: AGX1_YEAST (Alanine--glyoxylate aminotransferase 1 OS=Saccharomyces cerevisiae GN=AGX1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.311e-20
Identity = 64/227 (28.19%), Postives = 117/227 (51.54%), Query Frame = 1
Query:  139 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGT---PFLIPTTGTGAWESALTNTL---SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES-DWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGM-XDCCASPQALEASKTAKSGRV 795
            L +PGP+ +   V +A++  +  + SP   ++ + +L++ + +FK+ + +   PF++  +GT  W+   +N +   +P   ++    G FS  + D  +     VDVV     GE   L+++  KL+ ++     A+ + H +T+T V ++L  + + +        F+VD V SI   +F  DEWG+D ALT SQKA+  P G+    C+S     A   +K+G V
Sbjct:    8 LLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNS---YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHV 231          
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: PUCG_BACSU (Purine catabolism protein pucG OS=Bacillus subtilis GN=pucG PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19
Identity = 55/198 (27.78%), Postives = 101/198 (51.01%), Query Frame = 1
Query:  139 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGM 732
            +  PGPV +  +V+R M+        PA   +    +E ++++F+T +   + I  T     E+ L + + P D ++  + G+F  L  +  +R   NV ++E +WG     + +  ++          + +VH ET+TG  + L  + +        ALF+VD V++I   + ++DEW ID A+ G+QK LS+P+GM
Sbjct:   14 IMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKP---KIVAMVHGETSTGRIHPLKAIGEAC--RTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGM 206          
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: SPYA_DICDI (Serine--pyruvate aminotransferase OS=Dictyostelium discoideum GN=agxt PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.157e-17
Identity = 59/216 (27.31%), Postives = 102/216 (47.22%), Query Frame = 1
Query:  139 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMXDCCASPQALEASKTAKS 786
            L  PGP ++  +V + +  +   Y   +   +    +E ++ +F+T +     I   GT A E+ ++N + PGD+++  + G FS        R   N+  V+  WG+   L+ + S L     H  + + +V  ET+TGV   +  V +L   Y    L +VD V+++  +   +D+W ID   TG+QK LS P G+     S  A     T K+
Sbjct:   21 LLGPGPSNLHPRVNQQLISSMVGYTDASYYKVMDETMELMRYLFQTDNHFTIPISGAGTAAMETCVSNLIEPGDKVVCLVSGFFSDRIYQMAVRYGGNILKVDKQWGQWFALEEIESAL---VQHKPSLLTLVFGETSTGVKQQMEGVGELCKKYN--CLLMVDCVAALGGVPVFVDDWKIDACYTGTQKCLSGPPGISPLTFSNAACHKIATRKT 231          
BLAST of EY660214 vs. ExPASy Swiss-Prot
Match: SPYA_HUMAN (Serine--pyruvate aminotransferase OS=Homo sapiens GN=AGXT PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.233e-15
Identity = 63/201 (31.34%), Postives = 97/201 (48.26%), Query Frame = 1
Query:  139 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLW----IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTINAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTG 729
            L  PGP ++P +++ A         S  +  +   + E I+ +F+T +    +I  +G  A E+AL N L PGD   SFL+G   + W    +D  +R+   V  +  D G    L  +   LA    H    + + H E++TGV   L    +L   +R+  L LVD V+S+      MD  GID+  +GSQKAL+ P G
Sbjct:   25 LLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVLEPGD---SFLVGANGI-WGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQ---HKPVLLFLTHGESSTGVLQPLDGFGELC--HRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPG 216          
The following BLAST results are available for this feature:
BLAST of EY660214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
SGAT_ARATH6.998e-11578.68Serine--glyoxylate aminotransferase OS=Arabidopsis... [more]
SGAA_METEA1.581e-6651.00Serine--glyoxylate aminotransferase OS=Methylobact... [more]
SGAA_HYPME2.888e-6046.59Serine--glyoxylate aminotransferase OS=Hyphomicrob... [more]
DHSS_ANACY1.493e-3234.23Soluble hydrogenase 42 kDa subunit OS=Anabaena cyl... [more]
DHSS_SYNP11.599e-2629.78Soluble hydrogenase, small subunit OS=Synechococcu... [more]
Y959_METJA3.939e-2532.09Uncharacterized aminotransferase MJ0959 OS=Methano... [more]
AGX1_YEAST1.311e-2028.19Alanine--glyoxylate aminotransferase 1 OS=Saccharo... [more]
PUCG_BACSU5.509e-1927.78Purine catabolism protein pucG OS=Bacillus subtili... [more]
SPYA_DICDI5.157e-1727.31Serine--pyruvate aminotransferase OS=Dictyostelium... [more]
SPYA_HUMAN8.233e-1531.34Serine--pyruvate aminotransferase OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660214 ID=EY660214; Name=EY660214; organism=Citrus sinensis; type=EST; length=881bp
CCACGCGTCCGCCTATCTTCCTCTTCAGGTCAGGCGTTTTGGAGTTGTGA
AACAACAAGAACTCGTCAAACTTTAAGGTATCAGTGACATTCCAAGTAGG
GAAAGATGGACTATATGTATGCACCAGGGAAGAACCATCTCTTTGTTCCG
GGTCCTGTTCACATCCCCGATCAAGTCATCCGAGCAATGAATAGGAACAA
TGAGGACTACCGTTCTCCAGCAGTTCCAGCATTAACAAAAACTCTTCTTG
AGGATATCAAGAAAATTTTCAAGACCACTTCTGGAACTCCATTTCTGATC
CCAACCACAGGAACTGGTGCATGGGAGAGTGCACTTACAAACACACTGTC
TCCTGGAGATCGCATTATCTCTTTTCTGATTGGTCAATTCAGTTTGCTTT
GGATTGATCAGCAGCAGCGCCTCAACTTCAACGTTGATGTCGTCGAAAGT
GACTGGGGTGAAGGTGCAAAGCTTGATGTTTTGGCATCAAAACTTGCAGC
AGATACTGCACACACTATCAATGCCATTTGCATTGTTCATAACGAGACAG
CGACCGGAGTTACCAACAACTTGTCTAAAGTGAGAAAACTTCTTGATGAT
TACAGGCACCCGGCTCTTTTTCTCGTTGACGGAGTTTCCTCCATTTGTGC
CATCGATTTCCGTATGGATGAATGGGGCATAGATGTGGCTCTAACTGGCT
CTCAGAAAGCTCTTTCACTTCCTACTGGAATGGNNGATTGTTGTGCAAGC
CCCCAAGCTCTAGAGGCATCCAAAACTGCAAAATCTGGCAGAGTTTTCTT
TGATGGAAAGACTACATAAAGTTTACAATTGGGGAAATTTTTGGCATATA
CCCCTTCATTCAACTACTGTATGGGCTGCGA
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