EY660114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: RH41_ARATH (DEAD-box ATP-dependent RNA helicase 41 OS=Arabidopsis thaliana GN=RH41 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.660e-50 Identity = 98/139 (70.50%), Postives = 123/139 (88.49%), Query Frame = 2 Query: 17 SKHHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELIN 433 S++HF PPAVVYV SR+GADLL+NAI+V TG+KALSIHGEKPMKERR++M FL GEVPV+V+TG+LG+GV+LL VR VI+FDMP++IKEY+H IGRAS+MG +GTAIVFVNE+++NL ++ LKSSGA IP+ELIN Sbjct: 352 SQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELIN 490
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: RH41_ORYSJ (DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica GN=Os02g0201900 PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 2.168e-50 Identity = 98/143 (68.53%), Postives = 120/143 (83.92%), Query Frame = 2 Query: 17 SKHHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELINSRYT 445 SK HF PPAVV+V SR+GADLLS AI+V TG+K +SIHG+K M ERRE +R FL GEV V+V TG+LG+G++LL VR VI+FDMPNSI EYVHQ+GRAS+MG EG AIVFVNEE++NL RE+ ILK++GA IP+EL NS+YT Sbjct: 378 SKQHFKPPAVVFVSSRIGADLLSEAITVATGLKVVSIHGDKTMNERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQVGRASRMGVEGMAIVFVNEEDRNLFRELVQILKTAGAPIPRELANSKYT 520
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: DDX59_HUMAN (Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens GN=DDX59 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.845e-34 Identity = 68/141 (48.23%), Postives = 101/141 (71.63%), Query Frame = 2 Query: 20 KHHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELINSRY 442 K F PP +V+V +LGADLLS A+ TG+K++SIH EK ER+ I++ L G+ V+V+TG+LG+G++L+ VRLV+ FDMP+S+ EYVHQIGR ++G GTAI F+N +K L ++ +K +G+ +P +L+NS Y Sbjct: 440 KKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSILPPQLLNSPY 580
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: DDX59_RAT (Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus GN=Ddx59 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.337e-34 Identity = 67/138 (48.55%), Postives = 99/138 (71.74%), Query Frame = 2 Query: 29 FTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELINSRY 442 F PP +V+V +LGADLLS A+ TG+ + SIH EK ERREI++ L G+ V+V+TGILG+G++L+ V+LV+ FDMP+S+ EYVHQ+GR ++G GTAI F+N +K L ++ +K +G+ +P +L+NS Y Sbjct: 413 FKPPVLVFVDCKLGADLLSEAVQKITGLSSTSIHSEKSQVERREILKGLLEGDYEVVVSTGILGRGLDLVNVKLVVNFDMPSSLDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDVAKRVKPTGSILPPQLLNSPY 550
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: DDX59_MOUSE (Probable ATP-dependent RNA helicase DDX59 OS=Mus musculus GN=Ddx59 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.408e-33 Identity = 65/138 (47.10%), Postives = 99/138 (71.74%), Query Frame = 2 Query: 29 FTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELINSRY 442 F PP +V+V +LGADLLS A+ TG+ + SIH EK ERR+I++ L G+ V+V+TG+LG+G++L+ V+LV+ FDMP+S+ EYVHQ+GR ++G GTAI F+N +K L ++ +K +G+ +P +L+NS Y Sbjct: 443 FKPPVLVFVDCKLGADLLSEAVQKITGLNSTSIHSEKSQVERRDILKGLLEGDYEVVVSTGVLGRGLDLVNVKLVVNFDMPSSMDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDVAKRVKPTGSILPPQLLNSPY 580
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: RH37_ORYSJ (DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica GN=PL10A PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.208e-20 Identity = 53/135 (39.26%), Postives = 82/135 (60.74%), Query Frame = 2 Query: 44 VVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELINSRYTA 448 +V+V ++ GAD L N + T G A SIHG++ +ER +R F G P++VAT + +G+++ V VI FD+PN I +YVH+IGR + G G A F NE N +L R + ++++ + +PQ L RY+A Sbjct: 437 LVFVETKRGADALENWL-YTNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNLSLARPLCELMQEANQEVPQWL--ERYSA 568
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: RH52B_ORYSJ (DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 52/135 (38.52%), Postives = 79/135 (58.52%), Query Frame = 2 Query: 44 VVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELINSRYTA 448 +V+V ++ GAD L N + G A SIHG++ +ER +R F G P++VAT + +G+++ V VI FD+PN I +YVH+IGR + G G A F NE N L R + ++++ + +PQ L RY A Sbjct: 432 LVFVETKRGADALENWL-YNNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLARPLSELMQEANQEVPQWL--ERYAA 563
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: RH52C_ORYSJ (DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica GN=Os11g0599500 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19 Identity = 50/135 (37.04%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 44 VVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELINSRYTA 448 +V+V ++ GAD L + + + G A SIHG++ +ER +R F G P++VAT + +G+++ V V+ FD+PN I +YVH+IGR + G G A F NE N ++ R + ++++ S +P L SRY A Sbjct: 420 LVFVETKRGADSLEHWLCMN-GFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESNQEVPAWL--SRYAA 551
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: DDX3Y_PONAB (ATP-dependent RNA helicase DDX3Y OS=Pongo abelii GN=DDX3Y PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19 Identity = 49/133 (36.84%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 44 VVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELINSRY 442 +V+V ++ GAD L + + G SIHG++ ++R E + F G+ P++VAT + +G+++ VR VI FD+P+ I+EYVH+IGR ++G G A F NE+N N+ +++ D+L + +P L N Y Sbjct: 443 LVFVETKKGADSLEDFL-YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAY 574
BLAST of EY660114 vs. ExPASy Swiss-Prot
Match: DDX3Y_HUMAN (ATP-dependent RNA helicase DDX3Y OS=Homo sapiens GN=DDX3Y PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19 Identity = 49/133 (36.84%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 44 VVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRPFLVGEVPVIVATGILGQGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMG*EGTAIVFVNEENKNLIREMGDILKSSGACIPQELINSRY 442 +V+V ++ GAD L + + G SIHG++ ++R E + F G+ P++VAT + +G+++ VR VI FD+P+ I+EYVH+IGR ++G G A F NE+N N+ +++ D+L + +P L N Y Sbjct: 443 LVFVETKKGADSLEDFL-YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAY 574 The following BLAST results are available for this feature:
BLAST of EY660114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 362
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660114 ID=EY660114; Name=EY660114; organism=Citrus sinensis; type=EST; length=904bpback to top |