EY660100

Overview
NameEY660100
Unique NameEY660100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 2.516e-75
Identity = 153/239 (64.02%), Postives = 173/239 (72.38%), Query Frame = 1
Query:   82 MASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDS-SAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASW-LLPIPKVA---------------------DLNTGQAQEPYVFPDMDPYLDLDYGHVDTKLEAQEQNSSGTDGVVPRTTRNVYANGHLVNDACFDLDF 729
            MASKLCDSCKSATA ++CR D+AFLC++CD+K+HAANKLASRHARVW+CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSV S  +VK      VNFLD D Y   +DG +G    EE EAASW LLP PK                       ++NTGQ    Y+F D DPYLDLDYG+VD K+E+ EQNSSGTDGVVP   R V      VN+ CF++DF
Sbjct:    1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKH---TAVNFLD-DCYFSDIDG-NGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQ---QYLFSDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRI--PTVNENCFEMDF 229          
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.302e-54
Identity = 116/221 (52.49%), Postives = 139/221 (62.90%), Query Frame = 1
Query:   85 ASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASWLLPIPKVADLNTGQAQEPYVFPDMDPYLDLDYGHVDTKLEAQEQNSSGTDGVVPRTTRNVYANGHLVNDACFDLDFQAPNLT 747
            +S+LCDSCKS  AT+FCRAD+AFLC +CD KIH ANKLASRH RVW+CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPL+RRHERVP+TPFYD+V  +   +     VNF+DED          GDV+      ASWLL    +   N               + DLDY  ++      E+NSSG DGVVP        N   +N+  F+ D  A  ++
Sbjct:    4 SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPA---KSASSSVNFVDED---------GGDVT------ASWLLAKEGIEITNL--------------FSDLDYPKIEV---TSEENSSGNDGVVP------VQNKLFLNEDYFNFDLSASKIS 183          
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.999e-44
Identity = 101/224 (45.09%), Postives = 130/224 (58.04%), Query Frame = 1
Query:   85 ASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASWLLP--IPKVADLNTG----QAQEPYVFPDMDPYLDLDYGHVDTKLEAQEQNSSGTDGVVPRTTRN---VYANGHLVNDACFDLDF 729
            A++ CD+CKS TA VFCR DSAFLC+ CDT+IH+     +RH RVWVCEVCEQAPA VTCKADAAALCV+CD DIHSANPLA RHERVPV  F+DS +++  K         L        VD  +  V  ++     WLLP    + A +  G    +    ++F D D  +D ++ +         QN++G D +VP  T+       N    ND CFD+DF
Sbjct:   18 AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILGSS---TTVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEFPNSFN----HHQNNAGGDSLVPVQTKTEPLPLTN----NDHCFDIDF 226          
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.104e-38
Identity = 96/204 (47.06%), Postives = 122/204 (59.80%), Query Frame = 1
Query:   88 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASWLLP-IPKVADLNTGQAQEPYVFPDMDPYLDL-DYGHVDTKLEAQE----------QNSSGTDGVVP 663
            ++ CD+C+SA  TV+CRADSA+LC +CD ++HAAN+LASRH RV VC+ CE+APA   CKADAA+LC TCD +IHSANPLARRH+RVP+ P  +   SS     +        E+R    V G+  +   +EAEAASWLLP   K +  N G       F   D +L+L DY   D +   Q           Q S G DGVVP
Sbjct:    9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRL---VLGQE-EEDEDEAEAASWLLPNSGKNSGNNNG-------FSIGDEFLNLVDYSSSDKQFTDQSNQYQLDCNVPQRSYGEDGVVP 201          
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.638e-37
Identity = 88/198 (44.44%), Postives = 111/198 (56.06%), Query Frame = 1
Query:   88 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASWLLPIPKVADLNTGQAQEPYVFPDMDPYLDL-DY-GHVDTKLEAQE----QNSSGTDGVVP 663
            ++ CD+C+SA  TV+C ADSA+LC  CD ++HAAN++ASRH RV VC+ CE APA   CKADAA+LC  CD +IHSANPLARRH+RVP+ P   +  SS                           D   ++ E ASWLLP P     N G     ++F     YLDL DY   +D + E  +    Q S G DGVVP
Sbjct:   13 ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSET-------------------DADNDEDDREVASWLLPNP---GKNIGNQNNGFLFG--VEYLDLVDYSSSMDNQFEDNQYTHYQRSFGGDGVVP 186          
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.697e-36
Identity = 83/201 (41.29%), Postives = 114/201 (56.72%), Query Frame = 1
Query:   97 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYL--DHVDGRSGDVSREEAEAASWLLPIPKVADLNTGQAQEPYVFPD-----MDPYLDLDYGHVDTKLEAQE-----QNSSGTDGVVP 663
            CD+C+S   TV+C ADSA+LC++CD ++H+AN++ASRH RV VCE CE+APA   C+AD A+LC  CD ++HSANPLARRH+RVP+ P   +  SS     +       D ++ L  D  +G  GD  ++  E ASWL P    +D N        +F D     +D    +DY       + Q+     Q S G D VVP
Sbjct:   20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQEEGEEGD--KDAKEVASWLFP---NSDKNNNNQNNGLLFSDEYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVP 215          
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 43/96 (44.79%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   97 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 357
            CD C+ A ATV C AD A LC  CD +IHAANKLAS+H R+ +         C++C++  A + C  D A LC  CD  IH AN  +  H+R   T
Sbjct:    5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLAT 100          
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: STH_ARATH (Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.026e-16
Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   97 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQ 396
            CD C+ A AT+ C AD A LC  CD ++HAANKLAS+H R+++         C++C +  A + C  D A LC  CD   H+ N  +  H+R   T    ++ S++  Q
Sbjct:    5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQ 113          
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.646e-16
Identity = 44/111 (39.64%), Postives = 59/111 (53.15%), Query Frame = 1
Query:   97 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVW------------VCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVK 393
            CD C    A+VFC AD A LC  CD ++H ANKLAS+H R              +C++C+   A + C+ D A LC  CD  IH+AN   ++H+R  +T    S  SS  K
Sbjct:    5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYK 115          
BLAST of EY660100 vs. ExPASy Swiss-Prot
Match: STHY_ARATH (Probable salt tolerance-like protein At1g78600 OS=Arabidopsis thaliana GN=At1g78600 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.456e-16
Identity = 43/96 (44.79%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   97 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 357
            C+ C++A ATV C AD A LC  CD KIHAANKLA +H RV +         C++C++A     C  D A LC  CD  IH+ NP    H+R  +T
Sbjct:    5 CNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLT 100          
The following BLAST results are available for this feature:
BLAST of EY660100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
COL4_ARATH2.516e-7564.02Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
COL3_ARATH9.302e-5452.49Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis... [more]
COL5_ARATH2.999e-4445.09Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... [more]
COL1_ARATH1.104e-3847.06Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis... [more]
COL2_ARATH4.638e-3744.44Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... [more]
CONS_ARATH6.697e-3641.29Zinc finger protein CONSTANS OS=Arabidopsis thalia... [more]
STO_ARATH3.126e-1744.79Salt tolerance protein OS=Arabidopsis thaliana GN=... [more]
STH_ARATH2.026e-1637.61Salt tolerance-like protein OS=Arabidopsis thalian... [more]
STHX_ARATH2.646e-1639.64Probable salt tolerance-like protein At1g75540 OS=... [more]
STHY_ARATH3.456e-1644.79Probable salt tolerance-like protein At1g78600 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660100 ID=EY660100; Name=EY660100; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGCTCTTTATACCGCCTCAGAGAGAGAGAGAGTGTTTTAAA
ATTTTTGAACTGACTCGTTGCGTTGAGAGAAATGGCATCCAAGCTGTGTG
ACTCGTGCAAATCGGCAACGGCGACTGTGTTCTGCCGGGCCGACTCGGCG
TTCTTGTGTGTCAACTGCGACACCAAAATCCACGCGGCCAACAAGCTGGC
GTCGCGCCACGCGCGTGTCTGGGTTTGCGAGGTGTGTGAGCAGGCGCCGG
CCCACGTCACGTGCAAGGCAGACGCTGCGGCGCTCTGCGTCACGTGCGAC
CGCGACATCCATTCCGCCAACCCACTGGCCCGGCGCCACGAGCGAGTCCC
CGTGACACCCTTCTACGACTCAGTCGACTCCTCTGCCGTCAAGCAAGGCA
ACGGCGGAGTAGTCAACTTCTTAGACGAAGACCGCTACTTGGACCACGTC
GACGGGAGAAGCGGTGACGTCAGCAGGGAGGAAGCAGAGGCGGCTTCGTG
GCTGCTGCCGATCCCGAAGGTGGCGGATTTGAACACGGGTCAGGCGCAGG
AGCCGTATGTGTTCCCGGATATGGATCCGTATTTGGATTTAGATTACGGG
CATGTGGATACGAAGCTAGAAGCCCAGGAGCAAAACAGTTCGGGCACTGA
CGGTGTTGTTCCCCGTACAACCAGAAACGTTTACGCTAACGGCCATTTGG
TCAACGATGCATGCTTTGACCTCGATTTCCAGGCTCCAAATCTTACNGTT
ATGGCTACCACTCTCACTCGCAGTGCCTCAGTCAGAGTGTGTCGTCGTCA
TCGTTGGAGGTGGGACTGGTGCCACATGGAAGTAGTGCGATGACGGACAT
ACCAATCCGTACGGCAAAGAGTGGGGGTGGAGCAAGGTATCAAACGGT
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