EY660096

Overview
NameEY660096
Unique NameEY660096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 2.612e-70
Identity = 151/241 (62.66%), Postives = 175/241 (72.61%), Query Frame = 1
Query:  229 ASRRLGFSAA-DPLLTCHVASRLSSIKTKGTRAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKR-EGPQRGRKNESEFARNL-PLWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGV-QPPRGNLCPCGGSKAPHK 939
            ++RRLGFSA  D   + HVAS++ S++ KG R V++MAKKSVG+L+  DLKGKKVFVRADLNVPLDDNQNITDDTRIRAA+PTIK LI+NGAKVILS+HLGRPKGVTPKFSLAPLVPRLSELLGI+VVKADDCIGPEVE LVASL + G    +     +   KNE +FA+ L  L        F    ++H STEG  K LKPS   F L++ELD LVG V  P R      GGSK   K
Sbjct:   38 SARRLGFSAVVDSRFSVHVASKVHSVRGKGARGVITMAKKSVGDLNSVDLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKFLIENGAKVILSTHLGRPKGVTPKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVRFYKEEEKNEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSK 278          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 5.819e-70
Identity = 156/242 (64.46%), Postives = 175/242 (72.31%), Query Frame = 1
Query:  235 RRLGFS--AADPLLTCHVASRLSSIKT--KGTRAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKR-EGPQRGRKNESEFARNL-PLWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGV-QPPRGNLCPCGGSKAPHK 939
            RRLGF+  AAD L T HVA++L S+K+  K  R V SMAKKSVG+L+ A+LKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHL+ NGAKVILSSHLGRPKGVTPK+SLAPLVPRLSELLGIQVVK +DCIGPEVEKLVASL + G    +     +   KNE EFA+ L  L        F    ++H STEG  K LKPS   F L++ELD LVG V  P R      GGSK   K
Sbjct:   39 RRLGFAGAAADSLFTNHVATKLRSLKSSSKPIRGVASMAKKSVGDLTAAELKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLMANGAKVILSSHLGRPKGVTPKYSLAPLVPRLSELLGIQVVKVEDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSK 280          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 5.097e-66
Identity = 144/227 (63.44%), Postives = 164/227 (72.25%), Query Frame = 1
Query:  277 HVASRLSSIKTKGT---RAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKR-EGPQRGRKNESEFARNL-PLWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGV-QPPRGNLCPCGGSKAPHK 939
            HV S+++S K++ T   R V SMAKKSVG+L+ ADLKGKKVFVRADLNVPLDD+QNITDDTRIRAA+PTIKHLI NGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLG+QVVKADDCIGP+VEKLVA L + G    +     +   KN+ EFA+ L  L        F    ++H STEG  K LKPS   F L++ELD LVG V  P R      GGSK   K
Sbjct:    7 HVLSKINSYKSQSTKPIRGVASMAKKSVGDLTSADLKGKKVFVRADLNVPLDDSQNITDDTRIRAAIPTIKHLINNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGLQVVKADDCIGPDVEKLVAELPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSK 233          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.653e-64
Identity = 147/246 (59.76%), Postives = 169/246 (68.70%), Query Frame = 1
Query:  232 SRRLGFSA-ADPLLTCHVASRLSSIKT-KGTRAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVAS------LLKAGSSSWKREGPQRGRKNESEFARNL-PLWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGV-QPPRGNLCPCGGSKAPHK 939
            +R L F+A ADP L  HVASR  +    +GTRAV +MAKKSVG+L+ ADL+GK+V VRADLNVPLDDNQNITDDTRIRAA+PTIK+L+ NGAKVIL+SHLGRPKGVTPKFSLAPLVPRLSELLGI+V KA+D IGPEVEKLVA       LL      +K E      KN+ EFA+ L  L        F    ++H STEG  K LKPS   F L++ELD L G V  P R      GGSK   K
Sbjct:   37 ARSLAFAAGADPRLAVHVASRCRAASAARGTRAVATMAKKSVGDLTAADLEGKRVLVRADLNVPLDDNQNITDDTRIRAAIPTIKYLLSNGAKVILTSHLGRPKGVTPKFSLAPLVPRLSELLGIEVKKAEDVIGPEVEKLVADLANGAVLLLENVRFYKEE-----EKNDPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSK 277          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.079e-51
Identity = 117/203 (57.64%), Postives = 138/203 (67.98%), Query Frame = 1
Query:  340 KKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKR-EGPQRGRKNESEFARNLPLWQTL-CQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            K+SVG L  ADLKGKKVFVRADLNVPLDD Q ITDDTRIRA++PTIK+L++ GAKVIL+SHLGRPKGVTPKFSL PLV RLSELLG++VV A DCIG EVEKL A+L   G    +     +   KN+ EFA+ L     L     F    ++H STEG  K L+PS   F +++ELD LVG V  P+       GGSK   K
Sbjct:    4 KRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVILASHLGRPKGVTPKFSLKPLVARLSELLGLEVVMAPDCIGEEVEKLAAALPDGGVLLLENVRFYKEEEKNDPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSKVSSK 206          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.715e-51
Identity = 117/203 (57.64%), Postives = 140/203 (68.97%), Query Frame = 1
Query:  340 KKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLLKAGSSSWKR-EGPQRGRKNESEFARNL-PLWQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            KKSVG L  ADLKGK+VFVR DLNVPLD+N NITDDTRIRAAVPTIK+L+Q+G+ VIL+SHLGRPKGVTPK+SL PLVPRLSELLG++V  A+D IGPEVEKLVA + + G    +     +   KNE EFA+ L  L        F    ++H STEG  K LKP+   F +++ELD LVG V  P+       GGSK   K
Sbjct:    4 KKSVGSLKEADLKGKRVFVRVDLNVPLDENFNITDDTRIRAAVPTIKYLMQHGSHVILASHLGRPKGVTPKYSLKPLVPRLSELLGVEVKIANDSIGPEVEKLVAEIPEGGVLLLENVRFYKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPAVAGFLMQKELDYLVGAVANPQKPFAAIVGGSKVSSK 206          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.435e-46
Identity = 128/255 (50.20%), Postives = 155/255 (60.78%), Query Frame = 1
Query:  214 RMPTSASRRLGFSA-ADPLLTCHVASRLS-SIKTKG-TRAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQ-NITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK-GVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVAS------LLKAGSSSWKREGPQRGRKNESEFARNLPLWQTL-CQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQ-PPRGNLCPCGGSKAPHK 939
            R+   A R + FS+ A P+L    A  +S  I+  G +R VV   KKSVG+L  ADL+GK+VFVRADLNVPLD     ITDDTRIRAAVPT+K+L+ NGAKV+L+SHLGRPK G   K+ L P+V RLSELLG +V K DDCIGP VE+ VAS      LL      +K E      KN+ EFA+ L     L     F    ++H STEG  K LKPS   F L++ELD L G V  P R  +   GGSK   K
Sbjct:   18 RVAAVAPRVVPFSSVARPVLRSTFAPEVSIDIRRAGRSRIVVEAVKKSVGDLGKADLEGKRVFVRADLNVPLDKKTLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKEVKKVDDCIGPSVEQAVASLKSGELLLLENVRFYKEE-----EKNDPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSAPKRPFVAIVGGSKVSSK 267          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGKH_CHLRE (Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.798e-45
Identity = 116/216 (53.70%), Postives = 135/216 (62.50%), Query Frame = 1
Query:  322 AVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDD-NQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK-GVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVAS------LLKAGSSSWKREGPQRGRKNESEFARNLPLWQTL-CQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGV-QPPRGNLCPCGGSKAPHK 939
            +VV   KKSVG+L  ADL+GK+VFVRADLNVPLD     ITDDTRIRAAVPT+K+L+ NGAKV+L+SHLGRPK G   K+ L P+V RLSELLG  V K DDCIGPEVEK V +      LL      +K E      KNE EFA+ L     L     F    ++H STEG  K LKPS   F L++ELD L G V  P R  +   GGSK   K
Sbjct:   56 SVVEAVKKSVGDLHKADLEGKRVFVRADLNVPLDKATLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKPVTKVDDCIGPEVEKAVGAMKNGELLLLENCRFYKEE-----EKNEPEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSK 266          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.398e-39
Identity = 101/210 (48.10%), Postives = 122/210 (58.10%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVAS------LLKAGSSSWKREGPQRGRKNESEFARNLPL-WQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            M+KK+V  LS AD+ GK+  VR D NVPLDD  NITDDTRIRAA+PTI+ L Q GAKVIL+SH GRPKGV  K  L P+  RLSELLG +VVK DD IG EV   VA+      LL      +K E      KN+ EFA+ L           F    ++H STEG  K L PS   + +E+EL  L   ++ P+  L    GGSK   K
Sbjct:    1 MSKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVAKRLSELLGQEVVKTDDSIGDEVAAKVAALQNGQVLLLENVRFYKEE-----EKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSK 205          
BLAST of EY660096 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.826e-39
Identity = 100/210 (47.62%), Postives = 122/210 (58.10%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVAS------LLKAGSSSWKREGPQRGRKNESEFARNLPL-WQTLCQ*GFWDRSKSHGSTEGSNKILKPSGGWFPLERELDSLVGGVQPPRGNLCP-CGGSKAPHK 939
            M+KK+V  LS AD+ GK+  VR D NVPLDD  NITDDTRIRAA+PTI+ L Q GAKVIL+SH GRPKGV  K  L P+  RLSELLG +V+K DD IG EV   VA+      LL      +K E      KN+ EFA+ L           F    ++H STEG  K L PS   + +E+EL  L   ++ P+  L    GGSK   K
Sbjct:    1 MSKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENVRFYKEE-----EKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSK 205          
The following BLAST results are available for this feature:
BLAST of EY660096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKH_ARATH2.612e-7062.66Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGKH_TOBAC5.819e-7064.46Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKH_SPIOL5.097e-6663.44Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKH_WHEAT3.653e-6459.76Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKY_WHEAT2.079e-5157.64Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKY_TOBAC2.715e-5157.64Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKH_VOLCA3.435e-4650.20Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGKH_CHLRE3.798e-4553.70Phosphoglycerate kinase, chloroplastic OS=Chlamydo... [more]
PGK_ANAVT1.398e-3948.10Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_ANASP1.826e-3947.62Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660096 ID=EY660096; Name=EY660096; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGCATTTTCCTTCTCCCTTCTTCAATCAAACCAAAACCCAC
TTCCCATTTCTCCACTTTGTCGACAAAGTTTCAATCTTTTGCGCCTTTAC
TACGCCACTCCACTCCCACCACATCAATGGCTTCAGCCACCGCTCCCACT
ACTTTATCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTCTTCCCCACG
CGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGCTGGGGTTCT
CCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGGCTGAGCTCG
ATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAAGAAGAGCGT
GGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGTTTGTAAGAG
CTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACTGATGATACT
AGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCAAAATGGAGC
TAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTGTTACTCCGA
AATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTCCTGGGCATT
CAGGTTGTGAAAGCTGATGACTGCATTGGGCCAGAAGTAGAAAAGCTGGT
AGCCTCACTCCTGAAAGCGGGGTCTTCCTCCTGGAAACGGGAGGGTCCTC
AAAGAGGGAGAAAAAACGAATCCGAGTTTGCAAGAAACTTGCCTCTTTGG
CAAACTCTATGTCAATGAGGCTTTTGGGACCGCTCCAAAAGCCATGGCTC
AACTGAGGGAAGCAACAAAATTTTGAAGCCTTCTGGTGGCTGGTTCCCCC
TTGAAAGAGAACTGGATTCCTTGGTGGGGGGGGTTCAACCCCCAAGAGGC
AATTTGTGTCCTTGTGGGGGGTCAAAGGCTCCTCACAAAAGGAG
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