EY660084

Overview
NameEY660084
Unique NameEY660084
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBRA_ARATH (Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 1.119e-81
Identity = 137/168 (81.55%), Postives = 147/168 (87.50%), Query Frame = 2
Query:   23 PQTPHLASVVNTPGKPNR---PMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSR 517
            P TPHLASVV+ P K      P+VQCT HMCPIRVHWHVK NYKEYWRVKITITNFNY +NY+ WNLV QHPN DN+TQ+FSF YKSLTPY GLNDTAMLWG+KFYNDFLSEAGP GNVQSE+LFRKD STFTFEKGWAFPRRIYFNGDNCVMPPPD+YP+LPN  SR
Sbjct:  268 PDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFSFNYKSLTPYAGLNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPFLPNGGSR 435          
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 1.047e-79
Identity = 135/187 (72.19%), Postives = 152/187 (81.28%), Query Frame = 2
Query:   29 TPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRPVXXXXXXXXXXXXXWVFLLAYA 586
            +P+LASVVNT  K +  P+VQCTSHMCPIRVHWHVK+NYKEYWRVKIT+TNFNY MNYS WNLV QHP+FDNLT +FSF YKSL PY  +NDTAMLWGIK+YND L  AGP+GNVQSELLF+KD  +FTFEKGWAFPRR+YFNGDNCVMPPPDAYPWLPNAS+R +               FL+ YA
Sbjct:  260 SPYLASVVNTHNKDSLTPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNYRMNYSQWNLVTQHPSFDNLTTIFSFNYKSLNPYGVINDTAMLWGIKYYNDLLMTAGPDGNVQSELLFKKDPKSFTFEKGWAFPRRVYFNGDNCVMPPPDAYPWLPNASTRVMSSILLPFITIWTALTFLMVYA 446          
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.184e-77
Identity = 127/166 (76.51%), Postives = 142/166 (85.54%), Query Frame = 2
Query:   23 PQTPHLASVVNTPGKPNR--PMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASS 514
            P+ P +ASV+  PGK     P+VQCT HMCP+R+HWHVK+NYK+YWRVK+TITNFNY MNYS WNLVVQHPNFDNLTQ FSF YK LTPY  +NDT +LWGIKFYND L +AGP GNVQSELLF+K+AS FTFEKGWAFPRRIYFNGDNCVMPPPD+YPWLPN  S
Sbjct:  264 PKGPRIASVIPNPGKNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDNLTQTFSFNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNTGS 429          
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2)

HSP 1 Score: 285.034 bits (728), Expect = 4.118e-76
Identity = 129/161 (80.12%), Postives = 140/161 (86.96%), Query Frame = 2
Query:   32 PHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 511
            P +ASVV   GK N  P++QCT HMCPIRVHWHVK +YKEYWRVK+ ITNFNY MNYS WNLVVQHPNFDNLT+LFSF YK L PY  +NDTAMLWGIKFYNDFLS+AGP GNVQSELLF+K+   FTFEKGWAFPRRIYFNGDNCVMPPPD+YPWLPNAS
Sbjct:  259 PKIASVVPALGKNNLEPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDNLTKLFSFNYKPLNPYLNINDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKNPLEFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNAS 419          
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.553e-75
Identity = 124/163 (76.07%), Postives = 140/163 (85.89%), Query Frame = 2
Query:   29 TPHLASVVNTPGK-PNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPY-EGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 511
            +P+L S ++ PGK   +P+VQCTSHMCPIR+HWHVKLNYKEYWRVKITITNFNY MNY+ WNLV QHPNF+N+TQLFSF YK LTPY   +NDTAM WG+KFYND L +AGP GN QSELL RKD+  FTF+KGWAFP R+YFNGDNCVMPPPDAYPWLPNAS
Sbjct:  270 SPYLQSAIDGPGKWTGQPLVQCTSHMCPIRIHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVAQHPNFNNITQLFSFNYKPLTPYGSKINDTAMFWGVKFYNDLLMQAGPLGNAQSELLLRKDSKDFTFDKGWAFPHRVYFNGDNCVMPPPDAYPWLPNAS 432          
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBL2_ORYSJ (COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 5.034e-74
Identity = 122/163 (74.85%), Postives = 144/163 (88.34%), Query Frame = 2
Query:   29 TPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASS 514
            +P+LASVVN PGK +  P+VQCT HMCPIRVHWHVKLNY++YWRVK+TITN+NY MNYS WNLVVQHPNF+N++ +FSF YKSL PY  +NDTAM+WG+K+YND L  AGP+GNVQSELLFRKD STFTF+KGWAFPRRIYFNG++CVMP PD YPWLP +S+
Sbjct:  262 SPYLASVVNGPGKGSLTPLVQCTPHMCPIRVHWHVKLNYRDYWRVKVTITNWNYRMNYSQWNLVVQHPNFENVSTVFSFNYKSLNPYGVINDTAMMWGVKYYNDLLMVAGPDGNVQSELLFRKDRSTFTFDKGWAFPRRIYFNGESCVMPSPDLYPWLPPSST 424          
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSJ (COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.201e-67
Identity = 110/158 (69.62%), Postives = 131/158 (82.91%), Query Frame = 2
Query:   38 LASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 511
            L++ VNTP K   P++QCTSHMCPIRVHWHVKLNYK+YWR KI ITNFNY MNY+ W LV QHPN +N+T++FSF YK L PY  +NDT M +G+KFYND L EAGP GNVQSE+L RKD +TFTF +GWAFPR+IYFNGD C MPPPD+YP+LPN++
Sbjct:  288 LSAGVNTPRKDGAPLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFSFQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSA 445          
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSI (COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.201e-67
Identity = 110/158 (69.62%), Postives = 131/158 (82.91%), Query Frame = 2
Query:   38 LASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 511
            L++ VNTP K   P++QCTSHMCPIRVHWHVKLNYK+YWR KI ITNFNY MNY+ W LV QHPN +N+T++FSF YK L PY  +NDT M +G+KFYND L EAGP GNVQSE+L RKD +TFTF +GWAFPR+IYFNGD C MPPPD+YP+LPN++
Sbjct:  288 LSAGVNTPRKDGAPLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFSFQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSA 445          
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBL4_ARATH (COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 2.265e-66
Identity = 103/154 (66.88%), Postives = 131/154 (85.06%), Query Frame = 2
Query:   50 VNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 511
            +NTP K N P++QCT HMCP+RVHWHVK NYK+YWRVKI ITNFNY MN++LW L +QHPN +N+TQ+FSF YK ++PY  +NDT M +G KFYND L EAGP+GNVQSE+L +KD  TFTF++GWAFPR++YFNGD C++PPPD+YP+LPN++
Sbjct:  258 LNTPKKDNTPLLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQVFSFDYKPVSPYGSINDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSA 411          
BLAST of EY660084 vs. ExPASy Swiss-Prot
Match: COBL6_ORYSJ (COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.052e-63
Identity = 101/145 (69.66%), Postives = 124/145 (85.52%), Query Frame = 2
Query:   77 PMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGPNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 511
            P++QCT+HMCP+RVHWHVKLNY+EYWR KITI NFNY MNY+ W LV QHPN DN+T++FSF YK +  Y  +NDTAM +G+K++ND L EAGP+GNVQSE+L RKDA TFTF +GWAFPR++YFNGD C MPPPD+YP+LPNA+
Sbjct:  284 PLLQCTTHMCPVRVHWHVKLNYREYWRAKITIVNFNYRMNYTGWTLVAQHPNLDNITEVFSFDYKPVVSYGSINDTAMFYGLKYFNDQLMEAGPHGNVQSEVLMRKDARTFTFRQGWAFPRKVYFNGDECQMPPPDSYPYLPNAA 428          
The following BLAST results are available for this feature:
BLAST of EY660084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
COBRA_ARATH1.119e-8181.55Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 ... [more]
COBL1_ORYSJ1.047e-7972.19COBRA-like protein 1 OS=Oryza sativa subsp. japoni... [more]
COBL1_ARATH2.184e-7776.51COBRA-like protein 1 OS=Arabidopsis thaliana GN=CO... [more]
COBL2_ARATH4.118e-7680.12COBRA-like protein 2 OS=Arabidopsis thaliana GN=CO... [more]
COBL3_ORYSJ4.553e-7576.07COBRA-like protein 3 OS=Oryza sativa subsp. japoni... [more]
COBL2_ORYSJ5.034e-7474.85COBRA-like protein 2 OS=Oryza sativa subsp. japoni... [more]
COBL5_ORYSJ1.201e-6769.62COBRA-like protein 5 OS=Oryza sativa subsp. japoni... [more]
COBL5_ORYSI1.201e-6769.62COBRA-like protein 5 OS=Oryza sativa subsp. indica... [more]
COBL4_ARATH2.265e-6666.88COBRA-like protein 4 OS=Arabidopsis thaliana GN=CO... [more]
COBL6_ORYSJ1.052e-6369.66COBRA-like protein 6 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660084 ID=EY660084; Name=EY660084; organism=Citrus sinensis; type=EST; length=937bp
CCACGCGTCCGGTCATAACAGTCCACAGACTCCACATTTGGCATCAGTTG
TGAATACTCCAGGAAAACCCAACAGACCAATGGTTCAGTGTACCAGCCAT
ATGTGTCCCATCCGAGTTCATTGGCATGTCAAGCTCAATTATAAGGAGTA
CTGGCGTGTGAAGATCACAATCACTAATTTTAATTACGCAATGAATTACT
CACTGTGGAATCTAGTCGTGCAACACCCCAACTTTGATAATCTCACACAG
CTTTTCAGCTTTTATTACAAGTCATTAACTCCTTATGAAGGCTTAAATGA
TACAGCCATGCTGTGGGGAATAAAGTTTTACAATGATTTTCTCTCTGAAG
CAGGCCCTAATGGGAACGTGCAGTCAGAGCTGCTGTTTCGAAAAGATGCA
TCAACATTTACTTTTGAGAAGGGTTGGGCTTTCCCTAGAAGGATTTATTT
TAATGGAGATAACTGTGTGATGCCACCTCCAGATGCCTACCCGTGGTTGC
CAAACGCAAGTTCCCGGCCTGTTATTTCTCTGCTTCGTTCAGCCATAATA
ATCTTGGCATCTTGGGTATTCTTATTGGCTTATGCGTGATGAATTATATC
TGAGGCCCAAAGGCTAACTTCTAGAACGGTCTTGACGTGCTATCTTGTCT
GATATGTGCTGAAGCATATGTAATCCTGGTGCTCGGGGTCATGGGCCAAT
GCTGCAACTTGGACACCACTAAAGAGGGTTCAGAGCATTACAACCTGCTG
CTGAAATGCTTTTCTCTAATTATGGATGGGAATCAAAAGTTTTGCCTATT
TTTTTGAGGTATTTGGTGGGTGGAAGGTTATCAACAACCCCTGGATAAAA
ATTGGTGGAGGGAATCCCCAAAAAAGGTTTTGTATTAGGAACCTCCTGAA
AAAATTTGGTGGTAAAAAAAAAAAAAAAAAGAAAAAA
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