EY660048

Overview
NameEY660048
Unique NameEY660048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660048 vs. ExPASy Swiss-Prot
Match: GBP5_HUMAN (Guanylate-binding protein 5 OS=Homo sapiens GN=GBP5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.110e-12
Identity = 44/135 (32.59%), Postives = 78/135 (57.78%), Query Frame = 1
Query:  319 LAIENFHQAFPIVEPDPGHTKLRLSREGLETIRRITNPIAAIAVIGPYRSGKSFLLNQLLSLSCDEGFGVGHMRDTKTKGIWVWGNPVEMEIDGSRTSVFYLDTEGFERIGKSNGVDD-RIFAPATEMSPVLIIN 720
            +A+E  H + P+   +  + +L++++E LE +  IT P+  +A++G YR+GKS+L+N+L     ++GF V     + TKGIW+W  P     +    ++  LDTEG   + K++  +D +IFA A  +S   + N
Sbjct:    1 MALE-IHMSDPMCLIENFNEQLKVNQEALEILSAITQPVVVVAIVGLYRTGKSYLMNKLAGK--NKGFSVASTVQSHTKGIWIWCVP---HPNWPNHTLVLLDTEGLGDVEKADNKNDIQIFALALLLSSTFVYN 129          
BLAST of EY660048 vs. ExPASy Swiss-Prot
Match: GBP2_MOUSE (Interferon-induced guanylate-binding protein 2 OS=Mus musculus GN=Gbp2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.193e-12
Identity = 43/129 (33.33%), Postives = 70/129 (54.26%), Query Frame = 1
Query:  337 HQAFPIVEPDPGHTKLRLSREGLETIRRITNPIAAIAVIGPYRSGKSFLLNQLLSLSCDEGFGVGHMRDTKTKGIWVWGNPVEMEIDGSRTSVFYLDTEGFERIGKSNGVDD-RIFAPATEMSPVLIIN 720
            H + P+   +    +L +++E L  +  IT P+  +A++G YR+GKS+L+N+L       GF +G    + TKGIW+W  P   +   +  ++  LDTEG E + K +  +D  IFA A  +S   I N
Sbjct:    6 HMSEPMCLIENTEAQLVINQEALRILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKR--TGFSLGSTVQSHTKGIWMWCVPHPKK---AGQTLVLLDTEGLEDVEKGDNQNDCWIFALAVLLSSTFIYN 129          
BLAST of EY660048 vs. ExPASy Swiss-Prot
Match: GBP1_MOUSE (Interferon-induced guanylate-binding protein 1 OS=Mus musculus GN=Gbp1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.193e-12
Identity = 43/129 (33.33%), Postives = 70/129 (54.26%), Query Frame = 1
Query:  337 HQAFPIVEPDPGHTKLRLSREGLETIRRITNPIAAIAVIGPYRSGKSFLLNQLLSLSCDEGFGVGHMRDTKTKGIWVWGNPVEMEIDGSRTSVFYLDTEGFERIGKSNGVDD-RIFAPATEMSPVLIIN 720
            H + P+   +    +L +++E L  +  IT P+  +A++G YR+GKS+L+N+L       GF +G    + TKGIW+W  P   +   +  ++  LDTEG E + K +  +D  IFA A  +S   I N
Sbjct:    6 HMSEPMCLIENTEAQLVINQEALRILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKR--TGFSLGSTVQSHTKGIWMWCVPHPKK---AGQTLVLLDTEGLEDVEKGDNQNDCWIFALAVLLSSTFIYN 129          
BLAST of EY660048 vs. ExPASy Swiss-Prot
Match: GBP5_MOUSE (Guanylate-binding protein 5 OS=Mus musculus GN=Gbp5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12
Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 1
Query:  370 GHTKLRLSREGLETIRRITNPIAAIAVIGPYRSGKSFLLNQLLSLSCDEGFGVGHMRDTKTKGIWVWGNPVEMEIDGSRTSVFYLDTEGFERIGKSNGVDD-RIFAPATEMSPVLIINRQRR 732
            GH  L  ++E L+ +  IT P+  +A++G YR+GKS+L+N+L     ++GF VG    + TKGIW+W  P   + D    ++  LDTEG   + K +  +D +IFA A  +S   + N   +
Sbjct:   19 GH--LVTNQEALKILSAITQPVVVVAIVGLYRTGKSYLMNKLAGK--EKGFSVGSTVQSHTKGIWMWCVPHPQKPD---HTLVLLDTEGLGDVEKDDKKNDTQIFALAILLSSTFVYNTMNK 133          
BLAST of EY660048 vs. ExPASy Swiss-Prot
Match: GBP4_HUMAN (Guanylate-binding protein 4 OS=Homo sapiens GN=GBP4 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.227e-11
Identity = 42/125 (33.60%), Postives = 69/125 (55.20%), Query Frame = 1
Query:  349 PIVEPDPGHTKLRLSREGLETIRRITNPIAAIAVIGPYRSGKSFLLNQLLSLSCDEGFGVGHMRDTKTKGIWVWGNPVEMEIDGSRTSVFYLDTEGFERIGKSNGVDDR-IFAPATEMSPVLIIN 720
            PI   +    +L ++ + LE + +I+ P+  +A++G YR+GKS+L+N+L       GF +G    ++TKGIW+W  P    +     ++  LDTEG   + KSN  +D  IFA A  +S   + N
Sbjct:   25 PICLVENQEEQLTVNSKALEILDKISQPVVVVAIVGLYRTGKSYLMNRLAGKR--NGFPLGSTVQSETKGIWMWCVP---HLSKPNHTLVLLDTEGLGDVEKSNPKNDSWIFALAVLLSSSFVYN 144          
BLAST of EY660048 vs. ExPASy Swiss-Prot
Match: GBP7_HUMAN (Guanylate-binding protein 7 OS=Homo sapiens GN=GBP7 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.733e-11
Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 1
Query:  352 IVEPDPGHTKLRLSREGLETIRRITNPIAAIAVIGPYRSGKSFLLNQLLSLSCDEGFGVGHMRDTKTKGIWVWGNPVEMEIDGSRTSVFYLDTEGFERIGKSNGVDDR-IFAPATEMSPVLIIN 720
            ++E   GH  L ++ E LE +  IT P+  +A++G YR+GKS+L+N+L     ++GF +G    ++TKGIW+W  P   +      ++  LDTEG   + KS+   D  IFA A  +S   + N
Sbjct:   13 LIENTKGH--LVVNSEALEILSAITQPVVVVAIVGLYRTGKSYLMNKLAGK--NKGFPLGCTVKSETKGIWMWCVPHPSK---PNHTLILLDTEGLGDMEKSDPKSDSWIFALAVLLSSSFVYN 129          
The following BLAST results are available for this feature:
BLAST of EY660048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GBP5_HUMAN1.110e-1232.59Guanylate-binding protein 5 OS=Homo sapiens GN=GBP... [more]
GBP2_MOUSE7.193e-1233.33Interferon-induced guanylate-binding protein 2 OS=... [more]
GBP1_MOUSE7.193e-1233.33Interferon-induced guanylate-binding protein 1 OS=... [more]
GBP5_MOUSE9.394e-1235.25Guanylate-binding protein 5 OS=Mus musculus GN=Gbp... [more]
GBP4_HUMAN1.227e-1133.60Guanylate-binding protein 4 OS=Homo sapiens GN=GBP... [more]
GBP7_HUMAN2.733e-1135.48Guanylate-binding protein 7 OS=Homo sapiens GN=GBP... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-A01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660048 ID=EY660048; Name=EY660048; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGAAAACCGTTCTCTGCTCTTTACTCTGTTAGATGCAAAAA
CCACACTTTGCGGATGCATGATCCTTAACGTACACCAATTGTCACAATTT
CTTAAGATCCCATTCCTTTTCCGTTAAACTTTTGTTCAAATCCCGCTTTC
TTTCGTTTCTCTCATGAGTGCTTTCTATATACAGTTGCATTTACGAGCCA
CTGGCTTTGCCGCATTTGGGAGTTGACATTCTTGGCTCTGCGTCGTTTTT
CAGTCATGGGGATGTCGTTTCGTTGTTTGGTTTTCTCTGTTCTTCTCTGC
CTTTCCGCATCTGGGTTACTGGCTATTGAGAATTTTCACCAAGCGTTTCC
TATTGTGGAGCCTGATCCTGGTCATACAAAACTTCGTCTTTCAAGAGAAG
GCTTGGAAACCATCCGAAGAATAACAAACCCAATTGCAGCTATTGCTGTA
ATTGGTCCCTACCGCTCCGGCAAATCTTTTCTGCTTAATCAGCTTCTTTC
CCTTTCTTGTGATGAAGGTTTTGGCGTTGGACATATGCGTGACACAAAGA
CAAAAGGGATTTGGGTTTGGGGCAACCCAGTTGAGATGGAAATTGACGGT
TCCAGAACTTCTGTATTCTACCTTGATACTGAAGGGTTTGAAAGGATTGG
GAAGTCAAATGGGGTTGATGACCGGATTTTTGCTCCGGCAACTGAAATGA
GTCCTGTACTGATTATAAACCGGCAGAGACGATCCGGGAAGCTTGAATAA
CCAGGGTGGGCTTTTGCTGGTAAGCTTGCGGAAGAATCTATGGAAAAGAG
AAGGGACCAAAAGGTGCCTTTGACCCACCAAAACTGGGGGGGTTAACCAC
CGGGCTTTTGGCAGGGAACCCTGGCAAAAAAGGGGGCGGAGGCCTCAAAG
GATGCAATGGACAAGGGAAAAAAATTGACTGGTAACCAAAC
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