EY660019

Overview
NameEY660019
Unique NameEY660019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 5.589e-101
Identity = 185/253 (73.12%), Postives = 213/253 (84.19%), Query Frame = 1
Query:    7 VWXFNLY-RPKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVKRIKPKAR 762
            +W  NLY RPK+S+  LA ILPLA+VHTLGNLFTNMSLGKV+VSFTHTIKA EPFFSV+LSAMFLGE PT WV+GS+IPI+GGVALASVTEVSFNWAGF SAMASNLTNQSRNVLSKKVMV K+++LDNITLFSIIT+MS  LM PVT   EG+ FTP+Y+QSAG+N++++Y +SLIAA+C+HAYQQVSYMIL RVSPVTH                +FF+TPVS +NAFGTGIALAGVFL  RVKRIKPK +
Sbjct:  148 MWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEVPTPWVIGSIIPIVGGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKVMVKKDDSLDNITLFSIITLMSLFLMAPVTFFSEGIKFTPSYIQSAGVNVQQIYTKSLIAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYSRVKRIKPKPK 400          
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.770e-38
Identity = 90/239 (37.66%), Postives = 139/239 (58.16%), Query Frame = 1
Query:   31 PKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIA-AICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVKR 744
            PK        + P+A+ HT+G++   +S+ KVAVSFTH IK+ EP FSVL+S  F+GE   L V  SL+PI+GG ALA++TE++FN  GF  AM SNL    RN+ SKK M  K +++  +  ++ +++MS +++ P ++ +E      A  Q+A   +   +V  ++A ++ YH Y QVSYM L ++SP+T                 + F TP+  +NA G  IA+ G FL  + K+
Sbjct:  152 PKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGM--KGKSVSGMNYYACLSMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQAKQ 388          
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.943e-38
Identity = 93/239 (38.91%), Postives = 139/239 (58.16%), Query Frame = 1
Query:   31 PKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGE-FPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIA-AICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVK 741
            PK        + P+A+ HT+G++   +S+ KVAVSFTH IK+ EP FSVL+S   LGE FPT  V  SLIPI+GG AL+++TE++FN  GF  AM SNL    RN+ SKK M  K +++  +  ++ ++++S +++ P  + +EG        Q+A   +   +V  ++A ++ YH Y QVSYM L ++SP+T                 + FRTPV  +NA G  IA+ G FL  + K
Sbjct:  152 PKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTS-VYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFSKKGM--KGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVGPQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQAK 387          
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.268e-36
Identity = 93/242 (38.43%), Postives = 139/242 (57.44%), Query Frame = 1
Query:   28 RPKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGE-FP-TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEV-YVRSLI-AAICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVK 741
            R  +   LL  ++P+A+ H LG++ +N+S   VAVSFTHT+KA EPFF+   S   LG+  P TLW+  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  +++ I++++ I+ IP  LI+EG T        A   +  V +V  L    + YH Y QV+   L+RV+P+TH                + F   +S     GTGIA+AGV L   +K
Sbjct:  154 RAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWL--SLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIK 389          
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.090e-35
Identity = 93/254 (36.61%), Postives = 141/254 (55.51%), Query Frame = 1
Query:    4 GVWXFNL-YRPKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGE-FP-TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIA-----AICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVK 741
            G W   L  R  + S LL  ++P+A  H LG++ +N+S   VAVSFTHTIK+ EPFF+   S   LG+  P TLW+  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  L++ I+++S +  IP  +I+EG          A   + +V +   I+      + YH Y Q++   L+RV+P+TH                + F   +S   A GT IA+AGV +   +K
Sbjct:  151 GGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWL--SLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTD----MDSTNLYAYISIISLLFCIPPAIILEGPQLLKHGFSDA---IAKVGMTKFISDLFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIK 395          
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.187e-34
Identity = 91/247 (36.84%), Postives = 142/247 (57.49%), Query Frame = 1
Query:   28 RPKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGE-FP-TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLN--LKEVYVRSLIA-----AICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVK 741
            R  V+S +L  ++P+A+ H +G++ +N+S   VAVSFTHTIKA EPFF+   S   LG+  P TLW+  SL P++ GVA+AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  +++ I++++  + +P  +I+EG       L   G N  + +V +   I+      + YH Y Q++   L+RV+P+TH                + F   +S     GTGIA+AGV L   +K
Sbjct:  159 RAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWL--SLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTD----MDSTNVYAYISIIALFVCLPPAIIVEG-----PQLLKHGFNDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIK 394          
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.645e-34
Identity = 87/246 (35.37%), Postives = 137/246 (55.69%), Query Frame = 1
Query:   28 RPKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFP--TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQS------AGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVK 741
            R  ++ TLL  + P+AL H +G++ +N+S   VAVSF HTIKA EPFFS   +   LG+    +LW+  SL P++ GV++AS+TE+SFNW GF +AM SN++   R++ SKK M +    +D+  +++ I++++ I+ IP  LI EG    P  +Q       A + L +      +  + YH Y Q++   L+RV+P+TH                + F   +S     GT IA+AGV +   +K
Sbjct:  162 RAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWL--SLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKKAMTD----MDSTNVYAYISIIALIVCIPPALIFEG----PKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIK 397          
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.511e-34
Identity = 89/257 (34.63%), Postives = 140/257 (54.47%), Query Frame = 1
Query:    4 GVWXFNL-YRPKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEV-YVRSLI-AAICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVK-RIKPKAR 762
            G W   L  R  V S +L  ++P+   H LG++ +N+S   VAVSFTHTIKA EPFF+   S   LG+   + +  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  L++ I++++ +  IP  ++ EG          A   +  + ++  L    + YH Y Q++   L+RV+P+TH                + F   +S   A GT IA+AGV +   +K RI+ + R
Sbjct:  150 GSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTD----MDSTNLYAYISIIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVGMFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIKARIEEEKR 402          
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.313e-33
Identity = 90/247 (36.44%), Postives = 141/247 (57.09%), Query Frame = 1
Query:   28 RPKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGE-FP-TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLN--LKEVYVRSLIA-----AICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVK 741
            R  + S LL  ++P+A+ H +G++ +N+S   VAVSFTHTIKA EPFF+   S   LG+  P TLW+  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  +++ I++++  + +P  +I+EG       L   G N  + +V +   I+      + YH Y Q++   L+RV+P+TH                + F   +S   A GT IA+AGV L   +K
Sbjct:  156 RAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWL--SLAPVVIGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKKAMTD----MDSTNIYAYISIIALFVCLPPAIIVEG-----PQLMKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIK 391          
BLAST of EY660019 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.508e-33
Identity = 85/244 (34.84%), Postives = 131/244 (53.69%), Query Frame = 1
Query:   28 RPKVSSTLLANILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQS------AGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHXXXXXXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLLLRVK 741
            R  + ST L  + P+A  H LG++ +N+S   V VSFTHT+KA EPFF+   S   LG+   L +  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  +++ I++++ I  +P  + +EG    P  LQ       A + L +         + YH Y QV+   L+RV+P+TH                + F   +S     GT IA+AGV +   +K
Sbjct:  166 RAPIDSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAMTD----MDSTNVYAYISIIALIFCLPPAIFIEG----PQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIK 401          
The following BLAST results are available for this feature:
BLAST of EY660019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
TPT2_BRAOB5.589e-10173.12Triose phosphate/phosphate translocator, non-green... [more]
GPT2_ARATH1.770e-3837.66Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH3.943e-3838.91Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_PEA1.268e-3638.43Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR9.090e-3536.61Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB1.187e-3436.84Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE2.645e-3435.37Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR4.511e-3434.63Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL1.313e-3336.44Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU8.508e-3334.84Triose phosphate/phosphate translocator, chloropla... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-F07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660019 ID=EY660019; Name=EY660019; organism=Citrus sinensis; type=EST; length=864bp
AGAGGGGTGTGGANTTTTAATTTGTATAGACCAAAAGTTAGCAGCACTTT
GCTCGCAAATATTTTGCCGCTCGCATTGGTGCACACATTGGGTAACCTCT
TTACTAATATGAGTCTTGGGAAAGTGGCTGTTTCATTCACTCACACGATT
AAGGCTACGGAGCCATTCTTCTCTGTTCTCCTATCTGCTATGTTTCTAGG
GGAGTTCCCCACTCTCTGGGTTGTTGGATCTCTAATACCTATTATGGGTG
GTGTTGCGCTTGCGTCAGTTACTGAGGTTTCTTTTAATTGGGCTGGTTTC
TGGAGTGCAATGGCTTCCAATTTGACAAACCAATCTCGTAATGTCCTTAG
CAAAAAAGTCATGGTGAATAAAGAGGAAGCTTTGGACAATATCACCCTGT
TTTCTATAATAACAGTCATGTCTTTCATCCTGATGATCCCCGTGACTCTC
ATTATGGAAGGTGTCACGTTTACCCCTGCATACCTACAGTCTGCTGGTTT
GAATCTTAAAGAGGTTTATGTAAGGTCACTTATCGCTGCAATCTGTTACC
ATGCTTATCAGCAGGTCTCTTATATGATATTACAGAGGGTAAGCCCTGTT
ACCCATTCAGTAGGCAATTGTGTGAANAAGGTGGTGGTCATCGTGAGCTC
TGTTATGTTCTTCCGAACTCCAGTCTCAGCTATCAATGCCTTTGGCACTG
GGATTGCTCTTGCTGGAGTTTTCCTGTTACTCAGGGTGAAGCGCATTAAG
CCAAAGGCAAGACTGCTTTNAATTCTTGTGGGAGATTTTTTTTCAGGCAT
TTGGGTTGGTAGTTGATAAAATTTAAGCTGTCATTGAGAACCTGTTTTAG
GTCAGGGCAGAACT
back to top