EY659994

Overview
NameEY659994
Unique NameEY659994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 5.900e-100
Identity = 140/187 (74.87%), Postives = 160/187 (85.56%), Query Frame = 2
Query:   29 ISNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVD 589
            I+ + NG+K+ASE SV+P A I LYV CGSIYE+P S+G THLLERMAF+ST NRSHLRIVRE+EAIGGNV ASASRE M Y++DALKTYVP+MVE+L DCVRNP FLDWEV EQL KVK+EISE S NPQ LLLEA+HSAGY+G   N L+A E+ INRLNST+LEEFVAENYT PRMVLAASGV+
Sbjct:   77 ITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGATHLLERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRNPAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINRLNSTVLEEFVAENYTAPRMVLAASGVE 263          

HSP 2 Score: 102.064 bits (253), Expect = 5.900e-100
Identity = 49/86 (56.98%), Postives = 62/86 (72.09%), Query Frame = 1
Query:  589 HDQLVSVAEPLLSDLPSIHPREEPQSVYTGSDYRCQADSGGQLTHFCLAFDLPGGWHKDKDAMTLTVSD-AFGKEGIILAGGPGKG 843
            H++ + VAEPLLSDLP +   EEP+ VY G DYRCQAD+  ++THF LAF++PGGW  +K++MTLTV     G  G   AGGPGKG
Sbjct:  264 HEEFLKVAEPLLSDLPKVATIEEPKPVYVGGDYRCQADA--EMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKG 347          
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: MPPA1_ARATH (Probable mitochondrial-processing peptidase subunit alpha-1 OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.735e-90
Identity = 133/187 (71.12%), Postives = 156/187 (83.42%), Query Frame = 2
Query:   29 ISNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVD 589
            I+ +PNG+KIASET+ +P A I LYV CGSIYE+P   G THLLERMAF+ST NR+H R+VRE+EAIGGN  ASASREQM Y+ DALKTYVPEMVE+LID VRNP FLDWEVNE+L K+K EI+E++ NP   LLEAIHSAGYSG LA+PL APESA++RLN  LLEEF+ EN+T  RMVLAASGV+
Sbjct:   80 ITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKMKVEIAELAKNPMGFLLEAIHSAGYSGPLASPLYAPESALDRLNGELLEEFMTENFTAARMVLAASGVE 266          

HSP 2 Score: 83.5741 bits (205), Expect = 1.735e-90
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 1
Query:  589 HDQLVSVAEPLLSDLPSIHPREEPQSVYTGSDYRCQADSGGQLTHFCLAFDLPGGWHKDKDAMTLTVSD-AFGKEGIILAGGPGKG 843
            H++L+ VAEPL SDLP++ P+  P+S Y G D+R    +GG+ THF +AF++P GW+ +K+A+T TV     G  G   AGGPGKG
Sbjct:  267 HEELLKVAEPLTSDLPNVPPQLAPKSQYVGGDFR--QHTGGEATHFAVAFEVP-GWNNEKEAVTATVLQMLMGGGGSFSAGGPGKG 349          
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: MPPA2_ARATH (Probable mitochondrial-processing peptidase subunit alpha-2 OS=Arabidopsis thaliana GN=At3g16480 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 2.709e-88
Identity = 134/186 (72.04%), Postives = 149/186 (80.11%), Query Frame = 2
Query:   32 SNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVD 589
            + +PNG+ IA+E S +P A I LYV CGSIYE+P   G THLLERMAF+ST NRSH R+VRE+EAIGGN  ASASREQMGY+ DALKTYVPEMVE+LID VRNP FLDWEVNE+L KVK EI E + NP   LLEA+HSAGYSGALANPL APESAI  L   +LE FV ENYT  RMVLAASGVD
Sbjct:   77 TTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGALANPLYAPESAITGLTGEVLENFVFENYTASRMVLAASGVD 262          

HSP 2 Score: 81.2629 bits (199), Expect = 2.709e-88
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  589 HDQLVSVAEPLLSDLPSIHPREEPQSVYTGSDYRCQADSGGQLTHFCLAFDLPGGWHKDKDAMTLTVSD-AFGKEGIILAGGPGKG 843
            H++L+ V EPLLSDLP++    EP+S Y G D+R    +GG+ THF LAF++P GW+ +K+A+  TV     G  G   AGGPGKG
Sbjct:  263 HEELLKVVEPLLSDLPNVPRPAEPKSQYVGGDFR--QHTGGEATHFALAFEVP-GWNNEKEAIIATVLQMLMGGGGSFSAGGPGKG 345          
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: QCR2_HUMAN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens GN=UQCRC2 PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 4.136e-30
Identity = 69/185 (37.30%), Postives = 108/185 (58.38%), Query Frame = 2
Query:   32 SNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGV 586
            + +PNG+ IAS  + SPV+ I L++  GS YE   + GTTHLL   +  +T+  S  +I R +EA+GG +  +A+RE M Y+ + L+  V  ++E L++    P F  WEV +   ++K + +    NPQ+ ++E +H+A Y  ALANPL  P+  I ++ S  L  FV  ++T  RM L   GV
Sbjct:   41 TKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARMALIGLGV 225          
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: QCR2_RAT (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus GN=Uqcrc2 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.056e-28
Identity = 62/185 (33.51%), Postives = 106/185 (57.30%), Query Frame = 2
Query:   32 SNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGV 586
            + +PNG+ IAS  + +P++ I L++  GS YE+    GT+HLL   +  +T+  S  +I R +EA+GG +  +A+RE M Y+ + ++  +  ++E L++    P F  WEV    +++K + +    NPQ+ ++E +H   Y  ALANPL  P+  + ++ S  L  FV  ++T  RM L   GV
Sbjct:   40 TKLPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLGTSHLLRLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQNPQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLGV 224          
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: QCR2_MOUSE (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus GN=Uqcrc2 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.603e-28
Identity = 62/185 (33.51%), Postives = 106/185 (57.30%), Query Frame = 2
Query:   32 SNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGV 586
            + +PNG+ IAS  + +P++ I L+V  GS YE   + GT+HLL   +  +T+  S  +I R +EA+GG +  +A+RE M Y+ + +++ +  ++E L++    P F  WEV    +++K + +    N Q+ ++E +H   Y  ALANPL  P+  + ++ S  L  FV  ++T  RM L   GV
Sbjct:   41 TKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQNSQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLGV 225          
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.171e-27
Identity = 58/186 (31.18%), Postives = 106/186 (56.99%), Query Frame = 2
Query:   29 ISNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG 583
            +S + NG+++ASE S  P   + +++  GS YES  + G  + +E +AF+ T+NR    + +EVE++G ++ A ++RE   Y   AL   +P+ VELL D V+N    D ++ ++   +  E+ E   + + ++   +H+  + G  LA  +  P   + +L+   L E+++ +Y  PRMVLAA+G
Sbjct:   50 VSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAG 235          

HSP 2 Score: 29.261 bits (64), Expect = 2.171e-27
Identity = 19/67 (28.36%), Postives = 31/67 (46.27%), Query Frame = 1
Query:  589 HDQLVSVAEPLLSDLPSIHPREEPQSV----YTGSDYRCQADSGGQLTHFCLAFDLPGGWHKDKDAM 777
            H QL+ +A+   S L   +  +   ++    +TGS   C  + G  L H  +A + PG  H D  A+
Sbjct:  239 HRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQI-CHREDGLPLAHVAIAVEGPGWAHPDNVAL 304          
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: QCR2_BOVIN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus GN=UQCRC2 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.590e-27
Identity = 61/185 (32.97%), Postives = 106/185 (57.30%), Query Frame = 2
Query:   32 SNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGV 586
            + +PNG+ IAS  + +P + I L++  GS YE+  + GT+HLL   +  +T+  S  +I R +EA+GG +  +++RE M Y+ + L+  V  ++E L++    P F  WEV     +++ + +    NPQ+ ++E +H+A Y  ALAN L  P+  I ++    L ++V  ++T  RM L   GV
Sbjct:   41 TRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVTPVELHDYVQNHFTSARMALIGLGV 225          
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26
Identity = 63/186 (33.87%), Postives = 103/186 (55.38%), Query Frame = 2
Query:   29 ISNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG 583
            ++ + NG+++ASE S      + L++  GS YE+  + GT H LE MAF+ T+ RS L +  E+E +G ++ A  SREQ  Y   A    +P  VE+L D ++N    + E+  +   +  E+ EV  N Q ++ + +H+  Y   AL   +L P   I  +N   L +++  +Y GPR+VLAA+G
Sbjct:   60 VTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAG 245          
BLAST of EY659994 vs. ExPASy Swiss-Prot
Match: MPPA_NEUCR (Mitochondrial-processing peptidase subunit alpha OS=Neurospora crassa GN=mpp PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26
Identity = 59/189 (31.22%), Postives = 109/189 (57.67%), Query Frame = 2
Query:   23 NTISNIPNGVKIASETSVSPVAPISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGV 586
            + I+ + NGV++ASE      + + +Y+  GS YE+    G +H+++R+AF+ST  R+   ++  VE +GGN+Q ++SRE M Y        +P  VEL+ + +R+P   D E+  Q+   + E++E+ +  + +L E +H A +    L NPLL P+  ++ +N  +++ +    Y   R+V+A +GV
Sbjct:   52 DNITTLSNGVRVASEDLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRTADEMLETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPKLTDEELEGQIMTAQYEVNEIWSKAELILPELVHMAAFKDNTLGNPLLCPKERLDYINRDVIQTYRDAFYRPERLVVAFAGV 240          
The following BLAST results are available for this feature:
BLAST of EY659994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MPPA_SOLTU5.900e-10074.87Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA1_ARATH1.735e-9071.12Probable mitochondrial-processing peptidase subuni... [more]
MPPA2_ARATH2.709e-8872.04Probable mitochondrial-processing peptidase subuni... [more]
QCR2_HUMAN4.136e-3037.30Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR2_RAT5.056e-2833.51Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR2_MOUSE6.603e-2833.51Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR1_BOVIN2.171e-2731.18Cytochrome b-c1 complex subunit 1, mitochondrial O... [more]
QCR2_BOVIN5.590e-2732.97Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
MPPB_MOUSE1.626e-2633.87Mitochondrial-processing peptidase subunit beta OS... [more]
MPPA_NEUCR1.626e-2631.22Mitochondrial-processing peptidase subunit alpha O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659994 ID=EY659994; Name=EY659994; organism=Citrus sinensis; type=EST; length=891bp
TCATCAAACGGGCGTCCGGTAAAACACTATCTCTAATATACCAAATGGTG
TCAAAATTGCCTCGGAAACATCAGTGAGTCCTGTAGCCCCAATATCGTTA
TATGTTGGTTGTGGTTCAATTTATGAGTCACCAATCTCATTTGGGACAAC
ACACTTGCTTGAGCGTATGGCTTTTAGAAGTACAAGAAATAGGAGTCACT
TGCGTATTGTGCGAGAAGTGGAGGCAATTGGTGGCAATGTCCAAGCCTCA
GCTTCTAGGGAGCAGATGGGTTACTCCTTTGATGCTTTGAAAACTTATGT
TCCTGAAATGGTAGAGCTTCTTATTGACTGTGTGAGAAACCCTGTTTTTC
TGGATTGGGAGGTCAACGAACAGCTCACAAAGGTGAAATCTGAGATTAGT
GAGGTTTCCAACAATCCTCAAAGCTTGCTTTTGGAGGCAATTCACTCAGC
TGGTTACTCTGGTGCATTGGCTAATCCTCTTCTAGCCCCGGAATCTGCTA
TAAATAGATTAAACTCTACACTTCTCGAAGAATTTGTTGCTGAAAATTAT
ACTGGTCCTCGGATGGTACTTGCTGCTTCTGGTGTTGACATGACCAGTTG
GTGTCTGTAGCAGAACCACTTTTATCTGACCTACCCAGTATCCATCCTCG
CGAAGAGCCCCAATCTGTGTACACTGGGAGTGATTATCGTTGTCAAGCTG
ATTCAGGGGGACAGTTAACCCATTTTTGTCTTGCATTTGACCTTCCTGGN
GGGTGGCATAAGGATAAGGATGCCATGACTTTGACAGTCTCAGATGCTTT
TGGGAAGGAGGGGATCATTCTCGCTGGGGGCCCTGGAAAAGGATGCACTA
AAGCTGATTCCCCNGGGGTTGATGAGTCCCCCAAGTCAGGC
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