EY659577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: XCT_ARATH (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis thaliana GN=XCT PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.298e-33 Identity = 91/211 (43.13%), Postives = 109/211 (51.66%), Query Frame = 2 Query: 41 EILETAFKKETVCLFTREEYVEKMVSIRSMIXXXXXXXXXXXXXXXXXXXXXXRIK-RKIKGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAHAKLG*DPTVETSFLPDSEIDAHEQSDXXXXXXXXXXXXXXIRNEPLQITYSSWDGAGHTRVIQVRDGDTIRELLRAVHNYWHLSFEKCDQRQWEIXSMIKKILSSLINTSYMSLLVTK 670 EIL+TAFKKETV L TREEYVEK V+IR+ R K RKIKG+SRLSFA+DF T L KLG DP+VET+FLPDSE +A EQ++ I+NEPL+ITYS WDG GH RVIQVR GD I LRAV F + E +K+ L S+ L++ K Sbjct: 57 EILDTAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQQEEEELQLEKRNKKRKIKGSSRLSFAEDFENGSDEDDGENKSSGTGNLRCGKLGKDPSVETNFLPDSEREAEEQAERERLKKQWLREQEQIKNEPLEITYSYWDGTGHRRVIQVRKGDPIGNFLRAVQQQLAPDFREIRTASVENLLYVKEDLIIPHQHSFYELIINK 267 HSP 2 Score: 22.3274 bits (46), Expect = 3.298e-33 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 10 GLLQFGSSTC 39 GLLQFG+S+C Sbjct: 47 GLLQFGTSSC 56 HSP 3 Score: 112.464 bits (280), Expect = 3.714e-24 Identity = 57/77 (74.03%), Postives = 61/77 (79.22%), Query Frame = 1 Query: 550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGKCGE 780 Q LAP+FRE+R+ASV N LY KEDLIIPHQH YELI NKARG SGPLFHFDVH DVRTIA +EKDES GK E Sbjct: 228 QQLAPDFREIRTASVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 304
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: XCT_ORYSJ (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. japonica GN=XCT PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.236e-32 Identity = 87/211 (41.23%), Postives = 108/211 (51.18%), Query Frame = 2 Query: 38 AEILETAFKKETVCLFTREEYVEKMVSIRSMIXXXXXXXXXXXXXXXXXXXXXXRIKRKIKGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAHAKLG*DPTVETSFLPDSEIDAHEQSDXXXXXXXXXXXXXXIRNEPLQITYSSWDGAGHTRVIQVRDGDTIRELLRAVHNYWHLSFEKCDQRQWEIXSMIKKILSSLINTSYMSLLVTK 670 +EILETAFKKETV L TRE+YVEK V+IR+ I R KR+++G+ RLSF D+ + K KLG DPTVETSFLPD E +A EQ++ I+NEPL ITYS WDG GH RVIQVR GD+I E LRAV F + E +K+ L S+ L++ K Sbjct: 54 SEILETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKH-GPVKLGKDPTVETSFLPDREREAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINK 263 HSP 2 Score: 24.2534 bits (51), Expect = 1.236e-32 Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 7 PGLLQFGSST 36 PGLLQFGSST Sbjct: 44 PGLLQFGSST 53 HSP 3 Score: 110.538 bits (275), Expect = 1.411e-23 Identity = 57/77 (74.03%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGKCGE 780 Q LAPEFRE+R+ SV N LY KEDLIIPHQH YELI NKARG SGPLFHFDVH DVRTIA EKDES GK E Sbjct: 224 QQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKVVE 300
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: XCT_ORYSI (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. indica GN=XCT PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.236e-32 Identity = 87/211 (41.23%), Postives = 108/211 (51.18%), Query Frame = 2 Query: 38 AEILETAFKKETVCLFTREEYVEKMVSIRSMIXXXXXXXXXXXXXXXXXXXXXXRIKRKIKGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAHAKLG*DPTVETSFLPDSEIDAHEQSDXXXXXXXXXXXXXXIRNEPLQITYSSWDGAGHTRVIQVRDGDTIRELLRAVHNYWHLSFEKCDQRQWEIXSMIKKILSSLINTSYMSLLVTK 670 +EILETAFKKETV L TRE+YVEK V+IR+ I R KR+++G+ RLSF D+ + K KLG DPTVETSFLPD E +A EQ++ I+NEPL ITYS WDG GH RVIQVR GD+I E LRAV F + E +K+ L S+ L++ K Sbjct: 54 SEILETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKH-GPVKLGKDPTVETSFLPDREREAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINK 263 HSP 2 Score: 24.2534 bits (51), Expect = 1.236e-32 Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 7 PGLLQFGSST 36 PGLLQFGSST Sbjct: 44 PGLLQFGSST 53 HSP 3 Score: 110.538 bits (275), Expect = 1.411e-23 Identity = 57/77 (74.03%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGKCGE 780 Q LAPEFRE+R+ SV N LY KEDLIIPHQH YELI NKARG SGPLFHFDVH DVRTIA EKDES GK E Sbjct: 224 QQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKVVE 300
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50A_MOUSE (Protein FAM50A OS=Mus musculus GN=Fam50a PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.398e-17 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771 ++ + GSG ++ G T ++L +F E+RSA V +Y KEDLIIPH H Y+ I KARG SGPLF+FDVH+DVR ++ +EKDES GK Sbjct: 203 FSYWDGSGHRRTVKMKKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEKDESHAGK 305
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50A_HUMAN (Protein FAM50A OS=Homo sapiens GN=FAM50A PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.398e-17 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771 ++ + GSG ++ G T ++L +F E+RSA V +Y KEDLIIPH H Y+ I KARG SGPLF+FDVH+DVR ++ +EKDES GK Sbjct: 203 FSYWDGSGHRRTVKMRKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEKDESHAGK 305
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50B_MOUSE (Protein FAM50B OS=Mus musculus GN=Fam50b PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.744e-17 Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771 ++ + GSG R++ G T Q L +FRE+R+A V +Y KEDLI+PH H Y+ I KARG SGPLF FDVH+DVR ++ +EKDES GK Sbjct: 198 FSYWDGSGHRRTVRMSKGSTVQQFLKRALQGLRRDFRELRAAGVEQLMYVKEDLILPHYHTFYDFIVAKARGKSGPLFSFDVHDDVRLLSDATMEKDESHAGK 300
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: F50AB_XENLA (Protein FAM50A-B OS=Xenopus laevis GN=fam50a-B PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.744e-17 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771 ++L +F E+RSA V +Y KEDLIIPH H Y+ I KARG SGPLF+FDVH DVR ++ ++EKDES GK Sbjct: 236 EILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVRLLSDASVEKDESHAGK 309
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50A_XENTR (Protein FAM50A OS=Xenopus tropicalis GN=fam50a PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 7.502e-17 Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771 ++L +F E+RSA V +Y KEDLIIPH H Y+ I KARG SGPLF+FDVH DVR ++ +EKDES GK Sbjct: 243 EILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVRLLSDATVEKDESHAGK 316
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50A_DANRE (Protein FAM50A OS=Danio rerio GN=fam50a PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.798e-17 Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771 ++ + GSG ++ G T ++L +F E+RSA V + +Y KEDLIIPH H Y+ I KARG SGPLF+FDVH+D+R + +EKDES GK Sbjct: 205 FSYWDGSGHRKTVKMKKGNTIQQFLQRALEVLRKDFSELRSAGVEHLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDIRLVNDATVEKDESHAGK 307
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: F50AA_XENLA (Protein FAM50A-A OS=Xenopus laevis GN=fam50a-A PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.183e-16 Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 556 LAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771 L +F E+RSA V +Y KEDLIIPH H Y+ I KARG SGPLF+FDVH DVR ++ +EKDES GK Sbjct: 235 LRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVRLLSDATVEKDESHAGK 306 The following BLAST results are available for this feature:
BLAST of EY659577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659577 ID=EY659577; Name=EY659577; organism=Citrus sinensis; type=EST; length=945bpback to top |