EY705348

Overview
NameEY705348
Unique NameEY705348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY705348 vs. ExPASy Swiss-Prot
Match: UCKC_DICDI (Uridine-cytidine kinase C OS=Dictyostelium discoideum GN=udkC PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 57/158 (36.08%), Postives = 95/158 (60.13%), Query Frame = 2 
Query:   23 LLVLKSNKQVAYQDIL-KILDPAKFCSSAQNFIDMYLRLPGIPTNGQLTESDCIRVRICEGRFALLIREPLREGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEVSAFIYQDGKILIEVDHLQDAPSPYLQIKGVDKEAVAAAGSTLKLDGSYTTK 493
            + +LKS KQ    D++  +L+ +    +   + D+YL +P   T    +  D IRVR  +G+++++  E ++EG FII P+VDF + ++ + GL++LGYQ VA I   + I++DGKI+I  D L++    ++QIKG D  +V  AG  L L+ +Y  K
Sbjct:  237 IYILKSVKQGVTVDMIHSVLNKSTIQENTARYYDIYL-IPPNTTFANSSSCDWIRVRNADGQYSIMFSEEIKEGPFIISPRVDFVVGVNMLGGLMSLGYQMVAIIHRKSTIFKDGKIIISYDELEELGQTFVQIKGFDATSVQEAGKKLGLENNYLQK 393
The following BLAST results are available for this feature:
BLAST of EY705348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UCKC_DICDI1.139e-2236.08Uridine-cytidine kinase C OS=Dictyostelium discoid... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-042-E11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705348 ID=EY705348; Name=EY705348; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGCTGAGAGTTCTTTGCTTGTCTTAAAAAGCAACAAGCAAG
TGGCTTATCAAGATATTTTAAAAATCCTTGACCCTGCAAAGTTCTGCAGT
TCTGCACAGAATTTCATTGATATGTATCTAAGGCTTCCTGGAATTCCTAC
AAATGGGCAATTGACGGAGAGCGACTGCATTCGTGTCAGAATATGTGAAG
GCAGATTTGCGTTGCTGATACGAGAGCCACTAAGAGAAGGGAATTTCATC
ATTCAACCGAAAGTGGATTTTGATATTAGCATTAGTACTGTTGCTGGCCT
CCTTAACCTTGGGTACCAAGCCGTAGCTTATATTGAAGTATCTGCTTTTA
TCTACCAAGATGGAAAGATTCTTATAGAGGTAGACCATCTGCAAGATGCC
CCTAGTCCATATTTACAGATCAAAGGGGTCGACAAAGAAGCTGTGGCAGC
TGCTGGTTCGACTCTTAAATTGGATGGTTCATATACAACAAAGGTCATGT
CTTTAGCACTTTGATATATTTTAATTATGTATGGATGCATGTGTGTGTGT
GTGTGTTTTTCCCCCCATCACAGGCAGCTCTTATGTTTGTGAGGCCTCCT
GAATTGGCAACTTGACTTTTTTTTTTTTGCTGTAGAGTTATCTCCAAAAT
ATTTTGGGAAAATTACCAGCAGTAGAAAGAAATTCNAGTGGAATTCACAC
TCANCAAGCTGCAAGGTTGCAAGAACTTGTTGACTTTATACAATCCCAGG
GTAGTAATTCGTCTTCCGAATCCTCCCANTGAAAGAGGTTCTCCTGTAGA
AGGCATATTGAAGATTGCATCCAGGATTAAAGACTGGAGCGATGCAATGA
TCACACGGGATATTGATTTTTTGAGCCGGCACTGGTGTTATTCCTTTACC
AAGAAGCGCATGA
back to top