EY659385

Overview
NameEY659385
Unique NameEY659385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDX12_ARATH (Probable pyridoxal biosynthesis protein PDX1.2 OS=Arabidopsis thaliana GN=PDX12 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 5.586e-78
Identity = 145/200 (72.50%), Postives = 173/200 (86.50%), Query Frame = 1
Query:  247 EDGAVTVYGGSAITDAKKN-PFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP--SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR 837
            + GAVT+Y G+AITDAKKN PFS+K GLAQ+LRGGAIVEVSSV QAK+AE+AGACS++VS+P  SR G++RMPDP L+K VKRAVSVPVM+R RVGHFVEAQILES+ +DYIDESE++ +AD+ +FINKHNFR PF+CGCR+ GEALRRIREGAAMIRIQGDL  +G   ETVKNVR +MG+ R+LNNM  DE  TFAK+
Sbjct:   10 DQGAVTLYSGTAITDAKKNHPFSVKVGLAQVLRGGAIVEVSSVNQAKLAESAGACSVIVSDPVRSRGGVRRMPDPVLIKEVKRAVSVPVMARARVGHFVEAQILESLAVDYIDESEIISVADDDHFINKHNFRSPFICGCRDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKK 209          

HSP 2 Score: 23.483 bits (49), Expect = 5.586e-78
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 3
Query:  834 EIAAPYGLGAQTNKWGGXPWV 896
            +I+APY L AQT + G  P V
Sbjct:  209 KISAPYDLVAQTKQMGRVPVV 229          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDX1_HEVBR (Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis GN=PDX1 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 7.545e-67
Identity = 129/215 (60.00%), Postives = 163/215 (75.81%), Query Frame = 1
Query:  241 MAEDGAVTVYGGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR*RLRMDWVLK 867
            MA  G V VYG  AIT+ KK+PFS+K GLAQMLRGG I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP L+K +K++V++PVM++ R+GHFVEAQILE+IG+DY+DESEVL  ADE N INKHNFR PFVCGCRNLGEALRRIREGAAMIR +G+   +G  +E V++VR VMGD R+L NM  DE  TFAK+     D V++
Sbjct:    1 MAGTGVVAVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNVIEAVRHVRSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQ 214          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDX13_ARATH (Pyridoxal biosynthesis protein PDX1.3 OS=Arabidopsis thaliana GN=PDX13 PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 1.287e-66
Identity = 129/215 (60.00%), Postives = 163/215 (75.81%), Query Frame = 1
Query:  241 MAEDGAVTVYGGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR*RLRMDWVLK 867
            M   G V VYG  AIT+AKK+PFS+K GLAQMLRGG I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP ++K +K+AV++PVM++ R+GHFVEAQILE+IG+DYIDESEVL LADE + INKHNFR PFVCGCRNLGEALRRIREGAAMIR +G+   +G  +E V++VR V GD R+L NM  DE  TFAK+     D V++
Sbjct:    1 MEGTGVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQ 214          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDX1_PHAVU (Pyridoxal biosynthesis protein PDX1 OS=Phaseolus vulgaris GN=PDX1 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.978e-64
Identity = 123/205 (60.00%), Postives = 156/205 (76.10%), Query Frame = 1
Query:  271 GGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR*RLRMDWVLK 867
            G  AIT+ KK+PFS+K GLAQMLRGG I++V + +QA+IAE AGAC++M  E       ++ G+ RM DP L+K +KRAV++PVM++ R+GHFVEAQILE+IG+DY+DESEVL LAD+ N INKHNFR PFVCGCRNLGEALRRIREGAAMIR +G+   +G  +E V++VR VM D R+L NM  DE  TFAK      D V++
Sbjct:   14 GNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVMSDIRVLRNMDDDEVFTFAKSIAAPYDLVMQ 217          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDX11_ARATH (Pyridoxal biosynthesis protein PDX1.1 OS=Arabidopsis thaliana GN=PDX11 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.127e-62
Identity = 125/216 (57.87%), Postives = 161/216 (74.54%), Query Frame = 1
Query:  241 MAEDGAVTVYGGSAITDAK-KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR*RLRMDWVLK 867
            MA  G V VYG  A+T+ K K+PFS+K GLAQMLRGG I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP ++K +K AV++PVM++ R+GHFVEAQILE+IG+DY+DESEVL LADE N INKHNF+ PFVCGCRNLGEALRRIREGAAMIR +G+   +G  VE V++VR V G  R+L +M  DE  T+AK+     D V++
Sbjct:    1 MAGTGVVAVYGEGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADEDNHINKHNFKIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNVVEAVRHVRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQ 215          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDX1_GINBI (Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba GN=PDX1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.014e-61
Identity = 120/205 (58.54%), Postives = 154/205 (75.12%), Query Frame = 1
Query:  241 MAEDGAVTVYGGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR 837
            MA DG VTVYG  AITD K + +++K GLAQMLRGG I++V + EQA+IAE AGA ++M  E       ++ G+ RM DP L+K +K AV++PVM++ R+GHFVEAQILE+IG+DYIDESEVL  AD+ + INKHNFR PFVCGCRNLGEALRRI EGAAMIR +G+   +G  +E V++VR V+GD R L ++  DE   FAK+
Sbjct:    1 MASDGVVTVYGDGAITDTKVSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAQGGVARMSDPGLIKEIKSAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTPADDXHHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGE-AGTGNVIEAVRHVRSVLGDIRKLQSLDDDEVFAFAKQ 204          

HSP 2 Score: 22.7126 bits (47), Expect = 1.014e-61
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  834 EIAAPYGLGAQTNKWGGXPWVH 899
            +IAAPY L  QT + G  P V+
Sbjct:  204 QIAAPYELVRQTKQLGRLPVVN 225          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDX11_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.1 OS=Oryza sativa subsp. japonica GN=PDX11 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.070e-60
Identity = 127/224 (56.70%), Postives = 163/224 (72.77%), Query Frame = 1
Query:  241 MAEDGA--VTVYG----GSAITDA---KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR*RLRMDWVLK 867
            MA DG   VTVYG    G+A+ +    K   FS+K GLAQMLRGG I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP L++ +KRAV++PVM++ R+GHFVEAQILE+IG+DY+DESEVL LAD+ + INKHNFR PFVCGCR+LGEALRRIREGAAMIR +G+   +G  VE V++VR VMGD R L NM  DE  ++AKR     D V++
Sbjct:    1 MATDGTGVVTVYGSGTNGAALLEPSNHKSATFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADDAHHINKHNFRVPFVCGCRDLGEALRRIREGAAMIRTKGE-AGTGNVVEAVRHVRSVMGDIRALRNMDDDEVFSYAKRIAAPYDLVMQ 223          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDX12_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.2 OS=Oryza sativa subsp. japonica GN=PDX12 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 7.562e-59
Identity = 120/217 (55.30%), Postives = 158/217 (72.81%), Query Frame = 1
Query:  241 MAEDGA--VTVYGGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR*RLRMDWVLK 867
            MA DG   V +YGG+     K   FS+K GLAQMLRGG I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP L++ +KR+V++PVM++ R+GH VEAQILE+IG+DY+DESEVL LAD+ + INK+NFR PFVCGCR+LGEALRRIREGAAMIR +G+   +G  VE V++VR VMGD R L +M  DE  ++AKR     D V++
Sbjct:    1 MASDGTDVVALYGGANGLSHKSGSFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRSVTIPVMAKARIGHLVEAQILEAIGVDYVDESEVLTLADDAHHINKNNFRVPFVCGCRDLGEALRRIREGAAMIRTKGE-AGTGNVVEAVRHVRSVMGDIRALRSMDDDEVFSYAKRIAAPYDLVMQ 216          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDX1_SCHPO (Probable pyridoxine biosynthesis PDX1-like protein OS=Schizosaccharomyces pombe GN=snz1 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.900e-51
Identity = 107/194 (55.15%), Postives = 139/194 (71.65%), Query Frame = 1
Query:  298 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR*RLRMDWV 861
            K    +KAGLAQML+GG I++V + EQA+IAEAAGAC++M  E       ++ G+ RM DPS++K ++ AVS+PVM++VR+GHFVEAQILESIG+DYIDESEVL  AD+ N I K  F  PFVCG RNLGEALRRI EGAAMIR +G+   +G  VE V++ R + G+ R + +M  DE  T+AK     +D V
Sbjct:    6 KGSTQVKAGLAQMLKGGVIMDVVNAEQARIAEAAGACAVMALERVPADIRAQGGVARMSDPSMIKEIQAAVSIPVMAKVRIGHFVEAQILESIGVDYIDESEVLTPADDINHIEKSKFTVPFVCGSRNLGEALRRISEGAAMIRTKGE-AGTGDVVEAVRHTRQMQGELRRVKSMSPDELYTYAKEIAAPIDLV 198          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAD (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pdxS PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.205e-50
Identity = 102/187 (54.55%), Postives = 139/187 (74.33%), Query Frame = 1
Query:  295 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR 837
            +K+ ++ K GLAQML+GG I++V + EQA+IAE AGA ++M  E       ++ G+ RM DP L+ ++K+AV++PVM++ R+GHFVEAQ+LE+IG+DYIDESEVL  ADE + INKH FR PFVCGCRNLGEALRRI EGAAM+R +G+   +G  VE V++ R V  + R L +M  DE  T+AK+
Sbjct:    2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRIAEGAAMLRTKGE-AGTGNVVEAVRHARAVYSEIRRLQSMNEDELFTYAKQ 187          
The following BLAST results are available for this feature:
BLAST of EY659385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
PDX12_ARATH5.586e-7872.50Probable pyridoxal biosynthesis protein PDX1.2 OS=... [more]
PDX1_HEVBR7.545e-6760.00Probable pyridoxal biosynthesis protein PDX1 OS=He... [more]
PDX13_ARATH1.287e-6660.00Pyridoxal biosynthesis protein PDX1.3 OS=Arabidops... [more]
PDX1_PHAVU5.978e-6460.00Pyridoxal biosynthesis protein PDX1 OS=Phaseolus v... [more]
PDX11_ARATH1.127e-6257.87Pyridoxal biosynthesis protein PDX1.1 OS=Arabidops... [more]
PDX1_GINBI1.014e-6158.54Probable pyridoxal biosynthesis protein PDX1 OS=Gi... [more]
PDX11_ORYSJ3.070e-6056.70Probable pyridoxal biosynthesis protein PDX1.1 OS=... [more]
PDX12_ORYSJ7.562e-5955.30Probable pyridoxal biosynthesis protein PDX1.2 OS=... [more]
PDX1_SCHPO9.900e-5155.15Probable pyridoxine biosynthesis PDX1-like protein... [more]
PDXS_CHLAD2.205e-5054.55Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659385 ID=EY659385; Name=EY659385; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGTGCTCTTCAACGCTTGGAAAGGTGTCGAAATTTCTACAC
TAATCAATCAATTCCCCACCGACTAACCCCACCTTCGAAGCTCTTCAGAA
CCTTCTCGAACTCGCCCCAATCCTCGCTCTCCCTTCAATTTTATAAACCC
CTTTCCACAAAAAGAAACCCAGTACTCGATCAAACGATTCAATTACTACG
CTTCTTGCATCAGTGAGACATTTTTGCAAACGCCTTTGCAATGGCCGAAG
ACGGAGCGGTCACAGTGTACGGTGGCAGCGCCATTACTGACGCCAAGAAA
AACCCGTTTTCGATCAAAGCCGGCCTTGCCCAAATGCTACGTGGCGGGGC
CATTGTTGAAGTCTCCAGTGTGGAACAAGCCAAGATCGCCGAAGCAGCTG
GCGCCTGTTCTATCATGGTATCCGAGCCCAGCCGGCCCGGCATTAAGCGC
ATGCCGGATCCTTCTCTTGTTAAAAGCGTTAAACGCGCCGTTTCAGTCCC
CGTTATGTCACGTGTTCGTGTTGGGCATTTTGTTGAAGCGCAGATTCTTG
AAAGTATTGGGCTCGATTACATTGACGAGAGTGAGGTTTTAGGATTAGCT
GATGAATATAATTTTATTAACAAACATAACTTTAGGTTCCCGTTTGTGTG
TGGTTGTAGGAATCTTGGTGAAGCTTTGAGGAGAATTAGAGAAGGAGCTG
CTATGATAAGAATACAGGGGGATTTGTTAAATTCTGGTAAATATGTCGAG
ACTGTTAAAAATGTGAGGGTCGTTATGGGAGATATNCGAATTTTGAATAA
CATGGGATGAGATGAGGGTCTCACGTTTGCTAAGAGATAGCGGCTCCGTA
TGGATTGGGTGCTCAAACTAACAAATGGGGAGGGNTGCCGTGGGTGCATT
TGCTGCAGGAGTGGTGTG
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