EY659254

Overview
NameEY659254
Unique NameEY659254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_NOSP7 (Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glnB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29
Identity = 65/110 (59.09%), Postives = 88/110 (80.00%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            KVEAI+RP+++ +V  AL+N GI G+TVS+VRGFG Q G TER+ GSE++ + F+ K+K+EIVV  +QV+ V+DKI+  ARTGEIGDGKIF+ PV  VIR+RTGE+  +A
Sbjct:    3 KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKVEIVVDDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVIRIRTGEKNTEA 111          
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_FREDI (Nitrogen regulatory protein P-II OS=Fremyella diplosiphon GN=glnB PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29
Identity = 64/110 (58.18%), Postives = 88/110 (80.00%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            KVEAI+RP+++ +V  AL+N GI G+TVS+VRGFG Q G TER+ GSE++ + F+ K+K+EIVV  +QV+ V+DKI+  ARTGEIGDGKIF+ PV  V+R+RTGE+  +A
Sbjct:    3 KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKVEIVVEDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVVRIRTGEKNTEA 111          
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_SYNY3 (Nitrogen regulatory protein P-II OS=Synechocystis sp. (strain PCC 6803) GN=glnB PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.093e-29
Identity = 63/110 (57.27%), Postives = 88/110 (80.00%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            KVEAI+RP+++ +V  AL+N GI G+TVS+VRGFG Q G TER+ GSE++ + F+ K+K+EIVV + QV+ V+DK++  ARTGEIGDGKIF+ PV  V+R+RTGE+  +A
Sbjct:    3 KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKIEIVVDEGQVDMVVDKLVSAARTGEIGDGKIFISPVDSVVRIRTGEKDTEA 111          
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_SYNP6 (Nitrogen regulatory protein P-II OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glnB PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.455e-28
Identity = 63/106 (59.43%), Postives = 84/106 (79.25%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGER 500
            K+EAI+RP+++ +V  AL+N GI G+TVS+VRGFG Q G TER+ GSE++ + F+ K+K+EIVV   QV+ VIDKI+  ARTGEIGDGKIF+ PV   IR+RTGE+
Sbjct:    3 KIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEK 107          
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_SYNE7 (Nitrogen regulatory protein P-II OS=Synechococcus elongatus (strain PCC 7942) GN=glnB PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.455e-28
Identity = 63/106 (59.43%), Postives = 84/106 (79.25%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGER 500
            K+EAI+RP+++ +V  AL+N GI G+TVS+VRGFG Q G TER+ GSE++ + F+ K+K+EIVV   QV+ VIDKI+  ARTGEIGDGKIF+ PV   IR+RTGE+
Sbjct:    3 KIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEK 107          
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_AQUAE (Nitrogen regulatory protein P-II OS=Aquifex aeolicus GN=glnB PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.112e-26
Identity = 57/110 (51.82%), Postives = 87/110 (79.09%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            K+EAI++P+++ +V  AL+ +GI G+TV++V+GFG Q G TE + G+E+  D F+ KVK+E+VV  + VE V++ I++ A+TG +GDGKIF++PV DVIR+RTGER E+A
Sbjct:    3 KIEAIIKPFKLDEVKDALVEIGIGGMTVTEVKGFGQQKGHTEIYRGTEYVID-FLPKVKIEVVVRDEDVEKVVETIVKTAQTGRVGDGKIFIIPVEDVIRIRTGERGEQA 111          
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_PASMU (Nitrogen regulatory protein P-II OS=Pasteurella multocida GN=glnB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.670e-25
Identity = 59/110 (53.64%), Postives = 83/110 (75.45%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERCEKA 512
            K+EAI++P+++  V  +L ++GI G+TV++VRGFG Q G TE + G+E+  D F+ KVKMEIVV+ +QV+  I+ IME A+TG+IGDGKIF+  V  VIR+RTGE  E A
Sbjct:    3 KIEAIIKPFKLDDVRESLSDVGITGMTVTEVRGFGRQKGHTELYRGAEYMVD-FLPKVKMEIVVTDEQVDQCIEAIMETAQTGKIGDGKIFVYDVERVIRIRTGEENEDA 111          
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_AZOBR (Nitrogen regulatory protein P-II OS=Azospirillum brasilense GN=glnB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.962e-23
Identity = 51/106 (48.11%), Postives = 78/106 (73.58%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGER 500
            K+EAI++P+++ +V  AL  +GI+G+TV++ +GFG Q G TE + G+E+  D F+ KVK+E+V+    VE  I+ I + A TG IGDGKIF+ PV +V+R+RTGE+
Sbjct:    3 KIEAIIKPFKLDEVKEALHEVGIKGITVTEAKGFGRQKGHTELYRGAEYVVD-FLPKVKIEVVMEDSLVERAIEAIQQAAHTGRIGDGKIFVTPVEEVVRIRTGEK 107          
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_PORYE (Nitrogen regulatory protein P-II OS=Porphyra yezoensis GN=glnB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.347e-23
Identity = 52/105 (49.52%), Postives = 79/105 (75.24%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGE 497
            K+EAI+RP+++ +V  AL+  GI G+TV  V GFG Q G TER+ GSE+S D  + K+K+EI++S D+VE +++ I++ ++TGEIGDGKIF+  +  VIR+RT +
Sbjct:    3 KIEAIIRPFKLNEVKLALVKEGIGGMTVIKVSGFGRQKGQTERYKGSEYSID-IIDKIKIEIIISDDKVEKIVETIIKASKTGEIGDGKIFISSIERVIRIRTND 106          
BLAST of EY659254 vs. ExPASy Swiss-Prot
Match: GLNB_RHILO (Nitrogen regulatory protein P-II OS=Rhizobium loti GN=glnB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.709e-23
Identity = 50/105 (47.62%), Postives = 78/105 (74.29%), Query Frame = 3
Query:  183 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGE 497
            K+EAI++P+++ +V  AL   G++G+TV++ +GFG Q G TE + G+E+  D F+ KVK+E+V+  D VEG I+ I + A+TG IGDGKIF+  + +V+R+RTGE
Sbjct:    3 KIEAIIKPFKLDEVKEALQEAGLQGITVTEAKGFGRQKGHTELYRGAEYVVD-FLPKVKIEVVLGDDAVEGAIEAIRKAAQTGRIGDGKIFVSNIEEVVRIRTGE 106          
The following BLAST results are available for this feature:
BLAST of EY659254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GLNB_NOSP75.331e-2959.09Nitrogen regulatory protein P-II OS=Nostoc punctif... [more]
GLNB_FREDI6.963e-2958.18Nitrogen regulatory protein P-II OS=Fremyella dipl... [more]
GLNB_SYNY39.093e-2957.27Nitrogen regulatory protein P-II OS=Synechocystis ... [more]
GLNB_SYNP63.455e-2859.43Nitrogen regulatory protein P-II OS=Synechococcus ... [more]
GLNB_SYNE73.455e-2859.43Nitrogen regulatory protein P-II OS=Synechococcus ... [more]
GLNB_AQUAE1.112e-2651.82Nitrogen regulatory protein P-II OS=Aquifex aeolic... [more]
GLNB_PASMU4.670e-2553.64Nitrogen regulatory protein P-II OS=Pasteurella mu... [more]
GLNB_AZOBR1.962e-2348.11Nitrogen regulatory protein P-II OS=Azospirillum b... [more]
GLNB_PORYE3.347e-2349.52Nitrogen regulatory protein P-II OS=Porphyra yezoe... [more]
GLNB_RHILO5.709e-2347.62Nitrogen regulatory protein P-II OS=Rhizobium loti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659254 ID=EY659254; Name=EY659254; organism=Citrus sinensis; type=EST; length=827bp
CGTTTACTCCGCTCAACTTCTCTTCTCATCTCAAAGAACTTCCTCTTGTA
AATTTCGGCTCCGTGCGGCCAAGTTTGAGAATTTCTCGACTTTCTAGGCT
CAAATGCACAAGAAATGTATCAAATCTTCATGTTATCAGAGCCCAGAGCT
CACCTGATTATATTCCTGATTCTAAGTTTTACAAAGTGGAAGCCATTCTC
AGGCCCTGGAGAGTCCAGCAGGTTTCTTCGGCTTTGCTGAATATGGGTAT
CCGTGGTGTCACGGTTTCTGATGTTCGAGGTTTTGGTGCTCAAGGTGGCT
CAACAGAAAGGCATGGTGGCTCTGAATTTTCTGAGGATAAATTTGTTGCT
AAAGTGAAGATGGAGATTGTGGTGAGCAAAGACCAGGTGGAAGGAGTAAT
TGATAAAATTATGGAGGAGGCAAGGACTGGAGAAATTGGTGACGGCAAGA
TTTTTTTGGTACCTGTCTCAGATGTCATAAGAGTTCGAACTGGTGAACGA
TGTGAAAAAGCTGATAGGATGGCAGGAGGATGGTCGGACATATCTTCAGC
TGTGTGACCTTGTACTGATTTGTCGTATGATTTTGAAGCAAGATTAACAT
CAAAACCTCTTAAGGTTTAGAAGTTTATTGTGCCATTATTCTGTCCTGCA
TGGGCTTGATAAAAAAACCAGATTAAAAAACTGGCATTGGGCCTGCATCT
ACAAGACAGGTTTCCTTTTCTTAAAAAAGGAGAGAGGGAGAAAGGAGATT
TCCTACCCTTTTTTATGATTTAAATCCTCAACCCAAAAAAAGAATTTCTA
GCCTTATCAGTNAAAAAAAAAAAAAAA
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