EY659188

Overview
NameEY659188
Unique NameEY659188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659188 vs. ExPASy Swiss-Prot
Match: P2C40_ARATH (Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.229e-12
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 1
Query:    1 RAA*CAGFSLEELMNVPAGRRRKYHDDVTVIVIILGTNKRASKASTCV 144
            +AA  AGF+LEEL NVPAGRRR+YHDDVT++VI LGT++R SKAST V
Sbjct:  446 KAAARAGFTLEELTNVPAGRRRRYHDDVTIMVITLGTDQRTSKASTFV 493          
The following BLAST results are available for this feature:
BLAST of EY659188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
P2C40_ARATH7.229e-1272.92Probable protein phosphatase 2C 40 OS=Arabidopsis ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659188 ID=EY659188|Name=EY659188|organism=Citrus sinensis|type=EST|length=943bp
AGAGCAGCATAATGTGCAGGTTTCAGTCTGGAAGAATTGATGAATGTTCC
AGCTGGTAGACGGAGAAAATATCATGATGATGTAACTGTAATAGTAATCA
TCCTTGGAACCAACAAGCGCGCGTCTAAGGCATCAACTTGCGTGTAAGGC
GTCACCATTTTCTGTATTCAACTGGTTATAATGAATTTGCATTGTAGATT
ATGGCATTTAAAATTGTACATATAGTTTGATGTCACCGTCTTCTGTTTTC
TACCATCGCTTTTAATAGACTCATAGTTGTAGCTATAATTTTGCAATTGT
ATATATTGCTGATGGAAGAAAAATTTTCTTTTCCAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAATAAAAAAAACC
NANCNNCANCNCAAAAGACCACAAANNAACACACCCCGGACCGGGAAAGC
CCNGGGGGTGCCAAACTGAACCCCCGGGGAAAACAAGCGGCCCCCCGCCA
CCTGGCGGGAAACCCGAAAAGGCACCGGACCGGGCGCCCTTCCACAACNN
TTGAGGAAAAAAACACGCGACTGGGACCGCGCTCTAAAGCGGAACAAAAC
ACACCTTTTGCTCTTGGGGGTATTGGAAAAAAGACCGGGGACAATGGGCA
CCCCCTACAAACCGGGCCATTTAGGGGGGGGAGGGGGGGTGGTCCCCAAA
GGGGGCAGCTTTCCCCGGGAAGNGTCGAATCCGGCGCCCCCTTTGCGGGT
TTCCCTTTATTTCTCTAAGGCGCCNGGCGTTTAATTTTTATTTTTTTTAT
GGGGCACCCCCGGGGCCTCCCACAAAGAAAGGAGGGCGGCCCCCCCAGAG
GGCCCATAGGGTTAATGGGGCCCCGCCCCAAACAGATAAAAAA
back to top