EY676434

Overview
NameEY676434
Unique NameEY676434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length321
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9913 contig Csv1_Contig9913:1..288. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY676434 vs. ExPASy Swiss-Prot
Match: PRTS_SERMA (Extracellular serine protease OS=Serratia marcescens PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.635e-13
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = -1 
Query:   22 AGNPVYESILRSDSVAAAQQGFQQLSGEIYPAIDTMLINDSRQLRDAVGERLRH-------TPVTGESN-VWVKALGSWGKTDSRSDTAGYGTSLGGMLAGSTRE 312
            AG+P+YES L   S    QQ  +QLSG+I+  + +  IN+SR LRD   ERLR        T +  + N  W K LGSWG      +  GY TS  G+L G   E
Sbjct:  706 AGHPIYESFLGFTSARELQQATRQLSGQIHADMASAQINESRYLRDTATERLRQAEGRRTATDIKADDNGAWAKLLGSWGHASGNDNATGYQTSTYGVLLGLDSE 810
[Close]
BLAST of EY676434 vs. ExPASy Swiss-Prot
Match: PRTT_SERMA (Extracellular serine protease OS=Serratia marcescens PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.361e-12
Identity = 39/105 (37.14%), Postives = 53/105 (50.48%), Query Frame = -1 
Query:   22 AGNPVYESILRSDSVAAAQQGFQQLSGEIYPAIDTMLINDSRQLRDAVGERLRHTP--------VTGESNVWVKALGSWGKTDSRSDTAGYGTSLGGMLAGSTRE 312
            AG+P+YES L   +    QQ  +QLSG+I+  + +  IN+SR LRD   ERLR              ++  W K LG+WG      +  GY TS  G+L G   E
Sbjct:  706 AGHPIYESFLGFTTARELQQATRQLSGQIHADMASAQINESRYLRDTATERLRQADGRRTASDIKADDNGAWAKLLGNWGHASGNDNATGYQTSTYGVLLGLDSE 810
The following BLAST results are available for this feature:
BLAST of EY676434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PRTS_SERMA1.635e-1340.95Extracellular serine protease OS=Serratia marcesce... [more]
PRTT_SERMA2.361e-1237.14Extracellular serine protease OS=Serratia marcesce... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-F04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676434 ID=EY676434; Name=EY676434; organism=Citrus sinensis; type=EST; length=321bp
CCTGGCGGGTACGGGTCGGGATTCCCGGGTCGACCCCGCCAGCATGCCAC
CCAGTGAGGTGCCGTAGCCCGCCGTGTCGCTGCGGCTGTCGGTCTTGCCC
CAACTGCCGAGCGCCTTGACCCACACATTGCTTTCACCGGTAACCGGCGT
ATGGCGCAGGCGCTCGCCGACGGCATCACGTAGTTGGCGACTATCGTTGA
TCAGCATGGTGTCGATGGCCGGATAGATTTCCCCCGACAGTTGCTGGAAG
CCTTGTTGCGCGGCGGCCACGGAGTCCGAACGCAGGATGCTTTCGTACAC
CGGGTTGCCCGCGCCCAATTG
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