EY658953

Overview
NameEY658953
Unique NameEY658953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY658953 vs. ExPASy Swiss-Prot
Match: MYBG_DICDI (Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.196e-25
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 1 
Query:  202 KVRKPYTITRSRESWTDEEHDKFLEALQLFDRDWKKIEDFVGSETVIQIRSHAQKYFLKVQKNGT 396
            K RKPYTI++ RE+WTDEEH KFLEAL LFDRDWKKIE FVGS+TVIQIRSHAQKYF+KVQKN T
Sbjct:   30 KSRKPYTISKQRENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKVQKNNT 94
[Close]
BLAST of EY658953 vs. ExPASy Swiss-Prot
Match: LHY_ARATH (Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.414e-18
Identity = 37/66 (56.06%), Postives = 55/66 (83.33%), Query Frame = 1 
Query:  202 KVRKPYTITRSRESWTDEEHDKFLEALQLFDRDWKKIEDFVGSETVIQIRSHAQKYFLKVQKNGTI 399
            K RKPYTIT+ RE WT++EH++FLEAL+L+ R W++IE+ +G++T +QIRSHAQK+F K++K   +
Sbjct:   13 KARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEV 78
[Close]
BLAST of EY658953 vs. ExPASy Swiss-Prot
Match: CCA1_ARATH (Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.118e-18
Identity = 39/62 (62.90%), Postives = 53/62 (85.48%), Query Frame = 1 
Query:  202 KVRKPYTITRSRESWTDEEHDKFLEALQLFDRDWKKIEDFVGSETVIQIRSHAQKYFLKVQK 387
            K RKPYTIT+ RE WT+EEH++F+EAL+L+ R W+KIE+ V ++T +QIRSHAQK+F KV+K
Sbjct:   13 KTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEK 74
The following BLAST results are available for this feature:
BLAST of EY658953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MYBG_DICDI1.196e-2583.08Myb-like protein G OS=Dictyostelium discoideum GN=... [more]
LHY_ARATH2.414e-1856.06Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV... [more]
CCA1_ARATH4.118e-1862.90Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-130-F06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY658953 ID=EY658953; Name=EY658953; organism=Citrus sinensis; type=EST; length=968bp
CGGACGCTGTGGGGTCTTGCTCCTTTTTGAGAGTCTATGGTTTGAAGATT
AAAAGTTAAAATACCCTATAAAAAAATTATGAACTCAAACACGTCATCGT
CAACGCACCATACGCCTCCCCAACCGATGGCCACCACGTCATCAGCTGCG
ACAACTTCGTCGTCGGCCATTGATGGAGGAGCAGGCGCAGCTGGGAGCAA
GAAGGTACGGAAACCCTACACGATCACCAGATCTAGAGAAAGCTGGACTG
ACGAAGAACACGACAAGTTCCTTGAAGCTCTTCAGCTGTTTGACCGTGAC
TGGAAAAAAATTGAAGATTTTGTCGGTTCAGAGACAGTCATTCAGATTCG
GAGTCATGCTCAGAAATACTTTTTGAAGGTTCAAAAGAATGGGACAATTG
CACATGTTCCTCCTCCTCGTCCCAAGCGGAGAGCTGCTCATCCTTACCCA
CAAAAGGCCTCGAAAAATGTTTCTACCGCCCCTTCAAGCATTCATGGCTT
ATCCATCAGTAAAATGCCCTTGCACATGGAATTGCTGCTTGAGAGGATGC
TTCCATGCTGGTAAATGCGGAAAAATAGATGCCATCGCAGGATGAAAATA
CCAATCTTCACGCAATCCAAAGGCAGGGTTATTTTCATGTCCGGGGAGGT
TTCCTTAGATTTATTTTTAATAAGGATAGCCTGGGTTAAAGGGAACTTTT
CCTGGGCTTAATAAAAGAAATGGAAAATTAGTAGATGTGAATGGAAGAGA
AGGGATCACAGAAGGAACTCAGGAATTGTGTAATGGGAAGGGTGGGGGCA
TAAGGAAGGCCTACATAAACACAAAACACAAATAGGAAATATACCAGAAA
GAGAGGAACCAGAGCCCAGATTGATGTGCAGTGATATAAATAAAACGGCG
TGAGAAAGGAGAAATGAATTAATGGGGGAAAGGTGATTTTGTGCTTCAAC
GAACTTTAATAGAGAGCG
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