EY676198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY676198 vs. ExPASy Swiss-Prot
Match: PSAD_SOLLC (Photosystem I reaction center subunit II, chloroplastic OS=Solanum lycopersicum GN=psaD PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19 Identity = 59/128 (46.09%), Postives = 68/128 (53.12%), Query Frame = 3 Query: 45 ISMATQAGLFTPSIITTKTSKLLLNPWXXXXXXXXXXXXXXXXXMAQRTVRXXXXXXXXXXXXXXXXVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWGVAKGNKIF*EWPTWVEAAIYEG 428 ++MATQA LFTP + K++ PW R +R GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITW K +IF E PT A + +G Sbjct: 1 MAMATQASLFTPPLSVPKSTTA---PWKQSLVSFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPK-EQIF-EMPTGGAAIMRQG 123
BLAST of EY676198 vs. ExPASy Swiss-Prot
Match: PSAD_NICSY (Photosystem I reaction center subunit II, chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19 Identity = 63/128 (49.22%), Postives = 71/128 (55.47%), Query Frame = 3 Query: 45 ISMATQAGLFTPSIITTKTSKLLLNPWXXXXXXXXXXXXXXXXXMAQRTVRXXXXXXXXXXXXXXXXVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWGVAKGNKIF*EWPTWVEAAIYEG 428 ++MATQA LFTP++ K+S PW A R +R VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITW K +IF E PT A + EG Sbjct: 1 MAMATQASLFTPALSAPKSSA----PWKQSLASFSPKQLKSTVS-APRPIRAMAEEAATKEAEAP--VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPK-EQIF-EMPTGGAAIMREG 119
BLAST of EY676198 vs. ExPASy Swiss-Prot
Match: PSAD_CUCSA (Photosystem I reaction center subunit II, chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.299e-17 Identity = 67/170 (39.41%), Postives = 86/170 (50.59%), Query Frame = 3 Query: 45 ISMATQAGLFTPSIITTKTSKLLLNPWXXXXXXXXXXXXXXXXXMAQRTVRXXXXXXXXXXXXXXXXVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWGVAKGNKIF*EWPTWVEAAIYEGKGPKLALKFGLGKKQVAWASLVLKIWKN*KYKESSYPIFLQG 554 ++MATQA LFTPS+ T K++ + + PW + + GF+PP+LDP+TPSPIF GSTGGLLRKAQVEEFYVITW K +IF E PT A + E GP L L +K+ A L ++ K K Y +F G Sbjct: 1 MAMATQATLFTPSLSTPKSTGISI-PWKQSSTLSFLTSKPH---LKAASSSRSFKVSAEAETSVEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPK-EQIF-EMPTGGAAIMRE--GPNL---LKLARKEQCLA-LGTRLRSKYKIKYQFYRVFPNG 158
BLAST of EY676198 vs. ExPASy Swiss-Prot
Match: PSAD2_ARATH (Photosystem I reaction center subunit II-2, chloroplastic OS=Arabidopsis thaliana GN=psaD2 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.849e-16 Identity = 46/61 (75.41%), Postives = 48/61 (78.69%), Query Frame = 3 Query: 246 VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWGVAKGNKIF*EWPTWVEAAIYEG 428 VGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW K +IF E PT A + EG Sbjct: 61 VGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPK-EQIF-EMPTGGAAIMREG 119
BLAST of EY676198 vs. ExPASy Swiss-Prot
Match: PSAD1_ARATH (Photosystem I reaction center subunit II-1, chloroplastic OS=Arabidopsis thaliana GN=psaD1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.849e-16 Identity = 46/61 (75.41%), Postives = 48/61 (78.69%), Query Frame = 3 Query: 246 VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWGVAKGNKIF*EWPTWVEAAIYEG 428 VGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW K +IF E PT A + EG Sbjct: 65 VGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPK-EQIF-EMPTGGAAIMREG 123
BLAST of EY676198 vs. ExPASy Swiss-Prot
Match: PSAD_SPIOL (Photosystem I reaction center subunit II, chloroplastic OS=Spinacia oleracea GN=psaD PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.198e-15 Identity = 55/102 (53.92%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 249 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWGVAKGNKIF*EWPTWVEAAIYEGKGPKLALKFGLGKKQVAWASLVLKIWKN*KYKESSYPIFLQG 554 GFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW K +IF E PT A + E GP L L +K+ A L ++ K K Y +F G Sbjct: 70 GFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPK-EQIF-EMPTGGAAIMRE--GPNL---LKLARKEQCLA-LGTRLRSKYKIKYQFYRVFPSG 163
BLAST of EY676198 vs. ExPASy Swiss-Prot
Match: PSAD_HORVU (Photosystem I reaction center subunit II, chloroplastic OS=Hordeum vulgare GN=psaD PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.487e-15 Identity = 43/60 (71.67%), Postives = 47/60 (78.33%), Query Frame = 3 Query: 249 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWGVAKGNKIF*EWPTWVEAAIYEG 428 GF PPQLDP+TPSPIFGGSTGGLLRKAQVEEFYVITW K ++F E PT A + EG Sbjct: 63 GFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPK-EQVF-EMPTGGAAIMREG 120
BLAST of EY676198 vs. ExPASy Swiss-Prot
Match: PSAD_CHLRE (Photosystem I reaction center subunit II, chloroplastic OS=Chlamydomonas reinhardtii GN=psaD PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13 Identity = 51/101 (50.50%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 252 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWGVAKGNKIF*EWPTWVEAAIYEGKGPKLALKFGLGKKQVAWASLVLKIWKN*KYKESSYPIFLQG 554 +T P L+P+TPSPIFGGSTGGLLRKAQ EEFYVITW AK +IF E PT A + + GP L LKFG K+ +L ++ K Y +F G Sbjct: 53 WTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITW-EAKKEQIF-EMPTGGAAIMRQ--GPNL-LKFG---KKEQCLALTTQLRNKFKLTPCFYRVFPDG 145 The following BLAST results are available for this feature:
BLAST of EY676198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY676198 ID=EY676198; Name=EY676198; organism=Citrus sinensis; type=EST; length=853bpback to top |