EY676196

Overview
NameEY676196
Unique NameEY676196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP1_TOBAC (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 6.228e-48
Identity = 112/193 (58.03%), Postives = 137/193 (70.98%), Query Frame = 2
Query:   50 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAV-QEDDGSAV--SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGG 592
            MASTQCFLH HALS++ ART+SS   QR+VS++KP Q+VCRAQKQ+  QEDDG++V  SRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK NTDFL YNGDGFKL +P+KWNP      PG      + LR+           +      +KSI DYGSP+E ++Q+  ++  GK+    GKT   GG
Sbjct:    1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFPG------QVLRYEDNFDSTSNLIVTVTPTDKKSITDYGSPEEFLTQVDFLL--GKQAYF-GKTDSEGG 184          
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP1_ARATH (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 9.944e-46
Identity = 107/193 (55.44%), Postives = 132/193 (68.39%), Query Frame = 2
Query:   50 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGGGSN 601
            MA + CFLH  AL+++ AR+SSS   QRHVS  KP QI+C+AQ+    EDD SAVSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDFLPYNGDGFK+ +P+KWNP      PG      + LRF           +      +KSI DYGSP+E +SQ+  ++  GK+    G+T+  GG  N
Sbjct:    1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQS--HEDDNSAVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPG------QVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLL--GKQAYF-GETASEGGFDN 182          
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_CUCSA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.199e-44
Identity = 107/189 (56.61%), Postives = 130/189 (68.78%), Query Frame = 2
Query:   50 MASTQCFLHHHALSTTPARTSSSQRHVSNIK-PTQIVCRAQKQA-VQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGG 592
            MAST CFLHHHAL T  AR+SSS R  +  K P  +VCRAQKQ   QE++G  VSRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK+NTD+LPY+GDGFKLSIPSKWNP      PG      + LR+           +      +KSI D+GSP+E +S++  ++  GK+    GKT+  GG
Sbjct:    1 MASTSCFLHHHAL-TAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALTVLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPG------QVLRYEDNFDSNSNLSVIINPTDKKSIKDFGSPEEFLSKVDYLL--GKQAYF-GKTASEGG 179          
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP2_TOBAC (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum GN=PSBP2 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 9.307e-44
Identity = 106/191 (55.50%), Postives = 127/191 (66.49%), Query Frame = 2
Query:   50 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGS---AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGG 592
            MASTQCFLHHHALST PART   +  V ++KP Q+ VCRAQKQ+  ++D     +VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF  YNGDGFKL IPSKWNP      PG      + LRF           +      +KSI D+GSP++ +SQ+  ++    +    GKT   GG
Sbjct:    1 MASTQCFLHHHALST-PARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPG------QVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLG---RQAYSGKTDSEGG 181          
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_SPIOL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.537e-43
Identity = 105/192 (54.69%), Postives = 131/192 (68.23%), Query Frame = 2
Query:   50 MASTQCFLHHHALSTTPA--RTSSSQRHVS-NIKPTQIVCRAQKQAVQEDD--GSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGG 592
            MAST CFLHHHA  ++PA  R S++QR+ + +IKP QIVC+AQKQ   E +   S VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPK NT+F+PYNGDGFKL +PSKWNP   +  PG      + LR+           +      +KSI D+GSP++ +SQ+  ++  GK+    GKT   GG
Sbjct:    1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPG------QVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLL--GKQAYF-GKTDSEGG 183          
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_SOLTU (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.619e-43
Identity = 103/187 (55.08%), Postives = 126/187 (67.38%), Query Frame = 2
Query:   53 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGG 592
            ASTQCFLH +HAL ++PARTSS    V + KP Q++CRAQKQ    +  +AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL IP+KWNP      PG      + LR+           +      +KSI DYGSP+E +S++  ++  GK+    GKT   GG
Sbjct:    3 ASTQCFLHQYHALRSSPARTSS----VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPG------QVLRYEDNFDSTSNLMVAVTPTDKKSITDYGSPEEFLSKVDYLL--GKQAYF-GKTDSEGG 176          
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_SOLLC (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.879e-43
Identity = 106/189 (56.08%), Postives = 128/189 (67.72%), Query Frame = 2
Query:   53 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS--AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGG 592
            ASTQCFLH +HAL ++PARTSS    VS+ KP Q++CRAQKQ    DD S  AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL +P+KWNP      PG      + LR+           +      +KSI DYGSP+E +S++  ++  GK+    GKT   GG
Sbjct:    3 ASTQCFLHQYHALRSSPARTSS----VSSPKPNQLICRAQKQ----DDASNAAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPG------QVLRYEDNFDSTSNLIVAVTPTDKKSITDYGSPEEFLSKVDYLL--GKQAYF-GKTDSEGG 174          
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_PEA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.910e-42
Identity = 104/193 (53.89%), Postives = 123/193 (63.73%), Query Frame = 2
Query:   50 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGGGSNLEA 610
            MASTQCFLHH    TTP RT S QR V   KP  IVC+AQKQ    D  + VSRRLAL+VLIGAAAVGSKVSPADAAYGE+ANVFGK KTNTD+LPYNGDGFKL +P+KWNP      PG      + LR+           +      +KSI DYGSP+E +S++  ++  GK+       S GG  +N  A
Sbjct:    1 MASTQCFLHHQYAITTPTRTLS-QRQVVTTKPNHIVCKAQKQDDVVD--AVVSRRLALSVLIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPG------QVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLL--GKQAFFGQTDSEGGFDTNAVA 182          
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP3_TOBAC (Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum GN=PSBP3 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.535e-41
Identity = 105/192 (54.69%), Postives = 126/192 (65.62%), Query Frame = 2
Query:   50 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQ-KQAVQEDDGS---AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGG 592
            MASTQCFLHHHALST PARTS  +  V ++K  Q+ VCRAQ KQ+  + D     +VSRRLALT+LIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF  YNGDGFKL IPSKWNP      PG      + LRF           +      +KSI D+GSP++ +SQ+  ++    +    GKT   GG
Sbjct:    1 MASTQCFLHHHALST-PARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRLALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPG------QVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLG---RQAYSGKTDSEGG 182          
BLAST of EY676196 vs. ExPASy Swiss-Prot
Match: PSBP_FRIAG (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis GN=PSBP PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.816e-39
Identity = 96/190 (50.53%), Postives = 123/190 (64.74%), Query Frame = 2
Query:   50 MASTQCFLHHHALSTTPARTSSSQRH--VSNIKPTQIVCRAQKQA-VQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPQPRERVPGSGS*IQKQLRFXXXXXXXXXXXL-----KRKSIPDYGSPKE-ISQIRGIISWGKKTKIPGKTSFGGG 592
            MAS+ CFL HHA ST PA TS +  H  V  IKP+Q++CRAQK +   E+  +AVSRRLALT+LIG+AAVG+K++PA+AAYGE+ANVFGK KTNTDFLPY GDGF L IP+KWNP      PG      + LR+           +      +KSI DYG+P+E +S +  ++    K    GKT+  GG
Sbjct:    1 MASSACFLLHHAPST-PATTSRTPSHRLVPTIKPSQLICRAQKSSDTDENSSTAVSRRLALTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVEFPG------QVLRYEDNFDVTSNVSVTVTPTSKKSITDYGTPEEFLSTVDYLLG---KQAYSGKTASEGG 180          
The following BLAST results are available for this feature:
BLAST of EY676196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PSBP1_TOBAC6.228e-4858.03Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP1_ARATH9.944e-4655.44Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP_CUCSA3.199e-4456.61Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP2_TOBAC9.307e-4455.50Oxygen-evolving enhancer protein 2-2, chloroplasti... [more]
PSBP_SPIOL3.537e-4354.69Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_SOLTU4.619e-4355.08Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_SOLLC7.879e-4356.08Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_PEA3.910e-4253.89Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP3_TOBAC2.535e-4154.69Oxygen-evolving enhancer protein 2-3, chloroplasti... [more]
PSBP_FRIAG1.816e-3950.53Oxygen-evolving enhancer protein 2, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-019-H06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676196 ID=EY676196; Name=EY676196; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGAAAAATAAAAAATAAAGCCCATAGAGCGAAAAGAAAAAA
TGGCATCAACTCAATGCTTCCTGCACCACCATGCACTCTCTACTACACCA
GCAAGAACATCATCATCTCAGCGCCACGTGTCGAACATCAAGCCCACCCA
GATTGTCTGCCGTGCGCAGAAGCAAGCTGTCCAAGAAGATGACGGCAGCG
CCGTCTCCCGCCGTTTGGCTCTGACGGTGCTCATTGGTGCTGCTGCCGTC
GGCTCCAAGGTCTCTCCTGCCGACGCTGCCTACGGTGAATCAGCCAATGT
GTTTGGTAAGCCAAAGACCAACACTGACTTCTTGCCATACAATGGAGATG
GATTCAAGCTGTCGATTCCCTCAAAATGGAACCCCCAGCCAAGAGAGAGA
GTTCCCGGGTCAGGTTCTTAAATACAAAAACAACTTCGATTTCAACAGCA
GATGTCTCCGTCATAATCACCCCAACTGAAAAGAAAATCCATCCCTGACT
ACGGTTCCCCCAAAGAAATTTCACAAATAAGGGGGATAATTAGCTGGGGA
AAAAAAACAAAAATTCCGGGGAAAACTTCCTTCGGAGGGGGGGGTTCGAA
CCTGGAGGCAAGAGGAACACGCAAAAAATCATAGAAGCTTAAACCAAAAA
AAACAAAAAAAATCTAAGGAATTGAAAAAAAAAAAAACGCCAGAAGGGAA
AAAAAGAGGGGCACGCAAAACAGAAGAAAGAAACCAATAATTTAAAGGGA
ACAACATTTGATAATCGGAGAGGGGGACGCAAGGGGGGAAAAAGAAGGGG
GGTAGACGGGAGGGAAGAGGAGAAAAGGAAGAGAAAGAGGAAAGAGACCA
GTAGTAATGAAGAAGAGATGAGGAATAAGAGAAAGGGGAGCGACAAAGAT
AAGAGAAAGGGCAAGCGACAGACGGAATGAGTAGGAGAGGC
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