EY676018

Overview
NameEY676018
Unique NameEY676018
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY676018 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.877e-29
Identity = 66/113 (58.41%), Postives = 81/113 (71.68%), Query Frame = 3 
Query:  210 IYAGALTGKYTPQNPPTGPRGRIYTAEYLRNLQPLLNRIKELGENYSKTSTQVGLNWLLAQDNVVPIPRSQKCKTGCRIRGGIGMETHR*KGEQTALKWL-SKKKPVVSFPLE 545
            I  GALTGKYTP+NPP+GPRGRIYT E+L  LQPLLNRIK++GENYSKT TQ+ LNWL+AQ NV+PIP ++  +      G IG        E + L+ L S+ KPVV FP+E
Sbjct:  265 IAQGALTGKYTPENPPSGPRGRIYTREFLTKLQPLLNRIKQIGENYSKTPTQIALNWLVAQGNVIPIPGAKNAEQAKEFAGAIGWSLT--DNEVSELRSLASEIKPVVGFPVE 375

HSP 2 Score: 99.3673 bits (246), Expect = 3.205e-20
Identity = 67/167 (40.12%), Postives = 85/167 (50.90%), Query Frame = 1 
Query:    1 GIPLAPFQVNYSLIYRKPDQNGVKAACDELGITLIAYCPIAQARLKTS*AELVVPLFKIV**ESKCTTFKSMQVLSLESIHHRIHQLGLEAGSTLPSI*EISNHC*TESRN*ERTTAKLPHR*ASTGY*PRTMLCQSPGAKNAKQAAEFAGALGWRLTDEKVNKLRS 501
            GIPLA  QVNYSLIYR P+Q GVKAACDELG+TLIAY PIAQ  L         P         +   +    +  L+ + +RI Q+G                            +K P + A      +  +   PGAKNA+QA EFAGA+GW LTD +V++LRS
Sbjct:  226 GIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPIAQGALTGKYTPENPPS------GPRGRIYTREFLTKLQPLLNRIKQIG-------------------------ENYSKTPTQIALNWLVAQGNVIPIPGAKNAEQAKEFAGAIGWSLTDNEVSELRS 361
The following BLAST results are available for this feature:
BLAST of EY676018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1669_ARATH2.877e-2958.41Uncharacterized oxidoreductase At1g06690, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-017-G04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676018 ID=EY676018; Name=EY676018; organism=Citrus sinensis; type=EST; length=936bp
GGAATTCCATTAGCTCCTTTTCAAGTGAACTATAGCCTCATATACAGAAA
ACCAGACCAGAATGGTGTGAAGGCTGCCTGTGATGAACTTGGGATCACTT
TAATTGCATATTGTCCTATTGCTCAAGCCAGGCTCAAAACCTCGTAAGCG
GAATTGGTGGTTCCACTGTTTAAAATTGTCTGATGAGAATCAAAGTGTAC
GACTTTTAAATCTATGCAGGTGCTCTCACTGGAAAGTATACACCACAGAA
TCCACCAACTGGGCCTCGAGGCCGGATCTACACTGCCGAGTATCTAAGAA
ATCTCCAACCACTGTTGAACAGAATCAAGGAACTAGGAGAGAACTACAGC
AAAACTTCCACACAGGTAGGCCTCAACTGGCTATTAGCCCAGGACAATGT
TGTGCCAATCCCCAGGAGCCAAAAATGCAAAACAGGCTGCAGAATTCGCG
GGGGCATTGGGATGGAGACTCACCGATGAAAAGGTGAACAAACTGCGCTC
AAATGGCTTTCAAAAAAAAAACCTGTCGTCAGTTTCCCTCTGGAAAATTT
TGTAAATTTTTGCCTTTTAAACCAACCAAATTTAATACAAAAGCCGTTTA
AATTATGCCCCAATTTCCTAAAATTCCAACCCCGGTTGGAAAAAAGCTTT
TCACTTTCTTTAAAGGGAAAATTTAACCCCTTTGAAAAACAAAACCCCCC
CCCCTCTTAAAAATGGAAAAATCCCCTCCCCTTTTTTTTCTTTTTTAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGCGCCCCGCCTTTAAGA
AATACAAAGCTTAAAATCAACCCCCGGGGGGAGGGCGGCAACCTCAATAC
TCTTCCTTTATTAATGTTGTCGCCACACAAAAATTTTAAATTTCCTCTGG
GGGGCCCGCGCACTTTTTTTTTTATAACCGGCGCAG
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