EY676016

Overview
NameEY676016
Unique NameEY676016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length999
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY676016 vs. ExPASy Swiss-Prot
Match: BH035_ARATH (Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-20
Identity = 51/90 (56.67%), Postives = 66/90 (73.33%), Query Frame = 1 
Query:   46 EIMELESG-KSKKNFGFDFEQELPVLLRPKK-KKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLK 309
            EI ELES  KS  +F  DF+++L V +  KK K++D     +GS T+ +E+LEL+V  MGE+ +VVSVTC+KRTDTMVKLCE FESL LK
Sbjct:  110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLD-----SGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLK 194

HSP 2 Score: 34.6538 bits (78), Expect = 1.323e-20
Identity = 19/46 (41.30%), Postives = 31/46 (67.39%), Query Frame = 2 
Query:  308 KIITANITAVAGRLFEDSPLLRPDEEGEGRI*RIKIQTAIPALNES 445
            KI+T+N+T+ +G +F  +  +  DEE E  + R+KI+T I A NE+
Sbjct:  194 KILTSNLTSFSGMIFH-TVFIEADEE-EQEVLRLKIETGIGAYNET 237
The following BLAST results are available for this feature:
BLAST of EY676016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BH035_ARATH1.323e-2056.67Transcription factor bHLH35 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-017-G02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676016 ID=EY676016; Name=EY676016; organism=Citrus sinensis; type=EST; length=999bp
CCACGCGTCCGCCCACGCGTCCGGCAACCCAATAGGATTCGAGATGAAAT
AATGGAACTCGAGTCTGGGAAATCGAAGAAGAATTTTGGGTTTGATTTCG
AGCAGGAGCTGCCTGTTTTGTTGAGACCAAAGAAGAAGAAAATTGACCGG
TTCTTTGATTCGGCAGGATCAAGAACTGCTCCTGTTGAAATCCTTGAACT
TCGGGTAAAAACAATGGGAGAAAAGATATTGGTGGTGAGCGTAACTTGTA
GCAAAAGAACAGATACAATGGTTAAATTGTGTGAGGCCTTTGAATCTTTA
AAGCTAAAAAATCATCACCGCAAATATCACCGCTGTTGCTGGCAGGCTTT
TTGAAGACAGCCCTTTATTGAGGCCTGATGAAGAGGGAGAAGGACGAATT
TGAAGAATTAAAATTCAAACCGCAATTCCAGCTCTCAATGAATCCTCCAA
GTCCCCCAGGAAGCGTCAATGGTTCACAACCCCCAACAACCTTAAAATCC
GGTGAGGGGGGGAGTTTTTTGGGAAGGGTTTTATGAATGCCTTTTTATCA
CCCCCCCCCCCACCCATTACCCGGCTTTAATTTATTCCCCTTTTTCATGG
CATTATGGGAAAAAAACAAGAACGTTTTTCTGTCCCCCCCCCCCCCCACA
CCCCGCGCAATTGATATAGATAGGGGAGAAGGGGAATCAGAACAAGAGTA
TACCCCAAGAGCTAGAAGTTGGGCATAGGAAAGAAGAATAACAGAAGCGA
CTACAGGAAGAAATGAGCCAAACAACGAGCGGAGAGAAAATGCACAAAAA
CACAGAGCACCCGAAACAAACAGGGGATAAAGAGGAAAATTGAACAACAA
ACAAGACAACTGATCTGAGACTGGGGCAGGGAGGACGAAAGGGGGGACAT
GCAGGACAGCAAGAGTTGACGGGAGAGAGGAGACAAATCGCAGGAGGACG
GTGGAAGAGAGTAGAGATGAGGAATGGGGACAACAGACGAAAAATGATG
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