EY658224

Overview
NameEY658224
Unique NameEY658224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.946e-54
Identity = 98/119 (82.35%), Postives = 108/119 (90.76%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA 130          

HSP 2 Score: 26.9498 bits (58), Expect = 1.946e-54
Identity = 32/86 (37.21%), Postives = 42/86 (48.84%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G+ F PL GL   P + F   LKVKEIK
Sbjct:  141 SEGGLDYLGNPSL-VHAQSIL---AIWACQVVLMGAVEGYRVAGG-PLGEVVDPLYPGGS-FDPL-GLAEDP-EAFA-ELKVKEIK 217          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.537e-54
Identity = 98/119 (82.35%), Postives = 108/119 (90.76%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA 129          

HSP 2 Score: 26.9498 bits (58), Expect = 2.537e-54
Identity = 32/86 (37.21%), Postives = 42/86 (48.84%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G+ F PL GL   P + F   LKVKEIK
Sbjct:  140 SEGGLDYLGNPSL-VHAQSIL---AIWACQVVLMGAVEGYRVAGG-PLGEVVDPLYPGGS-FDPL-GLAEDP-EAFA-ELKVKEIK 216          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 7.326e-54
Identity = 97/119 (81.51%), Postives = 107/119 (89.92%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F GKAV L+PS +E++  GR++MRKT +K+   SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA 130          

HSP 2 Score: 26.5646 bits (57), Expect = 7.326e-54
Identity = 32/86 (37.21%), Postives = 42/86 (48.84%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G+ F PL GL   P + F   LKVKEIK
Sbjct:  141 SEGGLDYLGNPSL-VHAQSIL---AIWACQVVLMGAVEGYRIAGG-PLGEVVDPLYPGGS-FDPL-GLADDP-EAFA-ELKVKEIK 217          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 9.552e-54
Identity = 96/117 (82.05%), Postives = 105/117 (89.74%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F G+AV L+PS  E++  GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA 128          

HSP 2 Score: 26.5646 bits (57), Expect = 9.552e-54
Identity = 32/86 (37.21%), Postives = 42/86 (48.84%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G+ F PL GL   P + F   LKVKEIK
Sbjct:  139 SEGGLDYLGNPSL-VHAQSIL---AIWACQVILMGAVEGYRVAGG-PLGEVVDPLYPGGS-FDPL-GLAEDP-EAFA-ELKVKEIK 215          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 9.552e-54
Identity = 96/117 (82.05%), Postives = 104/117 (88.89%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F G+AV L+PS +E+S  GRI+MRK  +KS  S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA 128          

HSP 2 Score: 27.335 bits (59), Expect = 9.552e-54
Identity = 32/86 (37.21%), Postives = 42/86 (48.84%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G+ F PL GL   P + F   LKVKEIK
Sbjct:  139 SEGGLDYLGNPSL-VHAQSIL---AIWACQVVLMGAVEGYRIAGG-PLGEVVDPLYPGGS-FDPL-GLAEDP-EAFA-ELKVKEIK 215          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.759e-53
Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F GKAV L+PS +E++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA 129          

HSP 2 Score: 24.6386 bits (52), Expect = 2.759e-53
Identity = 31/87 (35.63%), Postives = 41/87 (47.13%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLE-REPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +     + G +    G P  + ++PL P G+ F PL GL   P + F   LKVKEIK
Sbjct:  140 SEGGLDYLGNPSL-VHAQSIL---AIWACQVVLMGAVEGYR--VAGEPLGEVVDPLYPGGS-FDPL-GLAEDP-EAFA-ELKVKEIK 216          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.596e-53
Identity = 99/127 (77.95%), Postives = 112/127 (88.19%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA---RGGSK 460
            F GKAV L+PS +E++  G+++MRKT SK+  VSS SPWYGP+RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA   +GGS+
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEAVWFKGGSQ 138          

HSP 2 Score: 25.0238 bits (53), Expect = 3.596e-53
Identity = 31/87 (35.63%), Postives = 42/87 (48.28%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLE-REPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            ++ GLDYLG P    H   +L     W   +     + G +    G P  + ++PL P G+ F PL GL   P + F   LKVKEIK
Sbjct:  141 SQGGLDYLGNPSL-VHAQSIL---AIWACQVVLMGAVEGYR--VAGEPLGEVVDPLYPGGS-FDPL-GLAEDP-EAFA-ELKVKEIK 217          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 7.965e-53
Identity = 96/119 (80.67%), Postives = 108/119 (90.76%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F GKAV L+PS +E++  G+++MRKT +K+  +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA 130          

HSP 2 Score: 25.0238 bits (53), Expect = 7.965e-53
Identity = 31/86 (36.05%), Postives = 41/86 (47.67%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  + ++PL P G+ F PL GL   P + F   LKVK IK
Sbjct:  141 SEGGLDYLGNPSL-VHAQSIL---AIWACQVVLMGAVEGYRVAGG-PLGEVVDPLYPGGS-FDPL-GLAEDP-EAFA-ELKVKHIK 217          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.388e-52
Identity = 118/204 (57.84%), Postives = 138/204 (67.65%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEARGGSKAGDPNLQRGRAWITWGNPKPDPTTQSSLGHLGLGQWVLKGNPFKG*KNWREGPLGKSD*THCPPRGHFFNPCGVWGENPERF 706
            F GKAV L+P  +E+   GR++MRKT   +  SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA    KAG      G      GN  P      S+  +   Q +L G   +G +   EGPLG+++    P  G  F+P G+   +PE F
Sbjct:   13 FAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA-VWFKAGSQIFSEG-GLDYLGN--PSLVHAQSILAIWATQVILMG-AVEGYRVAGEGPLGEAEDLLYP--GGSFDPLGL-ATDPEAF 207          
BLAST of EY658224 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.641e-52
Identity = 96/119 (80.67%), Postives = 105/119 (88.24%), Query Frame = 2
Query:   95 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCKWAMFGSSLGCVFPELLARNGVKFGEA 445
            F G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC+WAM G +LGCVFPELLARNGVKFGEA
Sbjct:   13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG-ALGCVFPELLARNGVKFGEA 130          

HSP 2 Score: 25.409 bits (54), Expect = 6.641e-52
Identity = 32/86 (37.21%), Postives = 41/86 (47.67%), Query Frame = 1
Query:  481 TRAGLDYLGEPQA*SHDPKLLGPPGAWPVGLEREPI*GLKKLAGGAPREK*LNPLSPKGALF*PLWGLGRKP*KVFG*TLKVKEIK 738
            +  GLDYLG P    H   +L     W   +         ++AGG P  +  +PL P G+ F PL GL   P + F   LKVKEIK
Sbjct:  141 SEGGLDYLGNPSL-VHAQSIL---AIWACQVVLMGAIEGYRVAGG-PLGEVTDPLYPGGS-FDPL-GLADDP-EAFA-ELKVKEIK 217          
The following BLAST results are available for this feature:
BLAST of EY658224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CB24_TOBAC1.946e-5482.35Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC2.537e-5482.35Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2G_SOLLC7.326e-5481.51Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB22_TOBAC9.552e-5482.05Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB2B_SOLLC9.552e-5482.05Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB25_NICPL2.759e-5381.51Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB23_NICPL3.596e-5377.95Chlorophyll a-b binding protein C, chloroplastic O... [more]
CB25_TOBAC7.965e-5380.67Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB21_SINAL5.388e-5257.84Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB27_TOBAC6.641e-5280.67Chlorophyll a-b binding protein 7, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-134-H09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY658224 ID=EY658224; Name=EY658224; organism=Citrus sinensis; type=EST; length=934bp
CTTCTCTTGCTTACCAGCTTCTGTTGCTTACACAGCTTCTGCTTCTCAAT
TAAATTCCTCAATGGCAACCTCGACCATGGCTCTCTCCTCATCATTCGTC
GGCAAGGCTGTGAACCTTGCCCCTTCAGGCAATGAGCTGAGCAATGGTGG
CCGCATCTCCATGCGTAAAACCGGGAGCAAGTCTGTTTCTTCAGGTAGCC
CGTGGTACGGCCCGGACAGAGTCAAGTACTTGGGTCCATTCTCTGGCGAG
CCCCCAAGCTACTTGACTGGTGAGTTCCCTGGTGACTACGGTTGGGACAC
TGCTGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAACTCG
AAGTCATCCACTGCAAATGGGCCATGTTTGGGAGCTCCTTGGGATGCGTC
TTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGCCCGTGG
TGGTTCAAAGGCGGGGGACCCAAATCTTCAACGAGGGCGGGCTTGGATTA
CTTGGGGGAACCCCAAGCCTGATCCCACGACCCAAAGCTCCTTGGGCCAC
CTGGGGCTTGGCCAGTGGGTCTTGAAAGGGAACCCATTTAAGGGTTAAAA
AAATTGGCGGGAGGGGCCCCTCGGGAAAAGTGACTGAACCCATTGTCCCC
CAAGGGGGCACTTTTTTAACCCCTGTGGGGTTTGGGGAGAAAACCCTGAA
AGGTTTTTGGGTGAACCTTAAAGGTAAAAGAAATCAAAAAAAAAGGAAAT
GGTGGGCTTTTTTTACCCCTAGTTTTGGTTATCTCTCATAAATGACTTCA
TTTCCACAAAGCAAAAAGAGAAACACAATAAAAAAAAAAATTGATGAGAA
ACCCGCGGTAACGTACGGAAACCCCTCGTATAGAAATAAAACAGTATCGG
GGGGGGGGGAGTCACTCTCCACACCCCACATATC
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