EY658221

Overview
NameEY658221
Unique NameEY658221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length989
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY658221 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.584e-15
Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 3
Query:  315 RRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANGGKFIINHGKISIAFGSGK 599
            R  ++DGK G Y W++Y++    A   GSA+   G+N GDR GI+  N PEW+++  A  + ++  V LY TLGAN  ++++NH +IS+    GK
Sbjct:   74 RELLADGKRGDYKWISYKQACIRANNIGSALVQLGLNKGDRIGIFSINRPEWVLSDMAAMNHSLVPVALYATLGANAIEYVVNHSEISVLLCEGK 168          
BLAST of EY658221 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.418e-13
Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 3
Query:  297 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRG--VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANGGKFIINHGKISIAF 587
            N   LG RK       PY WL+Y++V D +   GSA+  +G   +P    GI+  N PEW+I  +AC + ++  VPLYDTLGA+   +I+N  ++S+ F
Sbjct:  105 NGPCLGSRKPDQ----PYEWLSYKQVEDLSECIGSALLQKGFQASPDQFIGIFAQNRPEWVIIEQACFAYSMVVVPLYDTLGADAITYIVNKAELSVIF 199          
BLAST of EY658221 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.568e-12
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 3
Query:  297 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANGGKFIINHGKISIAF 587
            N   LG RK +     PY W++Y+EV + A   GS +  +G  P      G++  N PEW+I  + C S ++  VPLYDTLGA+   +I+N  ++S+ F
Sbjct:  106 NGPCLGSRKPNQ----PYEWISYKEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGADAITYIVNKAELSVIF 200          
BLAST of EY658221 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.780e-12
Identity = 38/97 (39.18%), Postives = 54/97 (55.67%), Query Frame = 3
Query:  297 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANGGKFIINHGKISI 581
            N   LG RK +     PY W++Y++V D A   GS +  +G  P      GI+  N PEW+I+  AC + ++  VPLYDTLGA    ++IN   IS+
Sbjct:   90 NGPCLGYRKPNQ----PYKWISYKQVSDRAEYLGSCLLHKGYKPSQDQFIGIFAQNRPEWVISELACYTYSMVAVPLYDTLGAEAIIYVINRADISV 182          
BLAST of EY658221 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.956e-11
Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 3
Query:  297 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN--PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANGGKFIINHGKISIAF 587
            N   LG RK       PY WL+Y++V + +   GSA+  +G    P    GI+  N PEW+I  + C + ++  VPLYDTLG     +I+N  ++S+ F
Sbjct:  105 NGPCLGSRKPDQ----PYEWLSYKQVAELSECIGSALIQKGFKTAPDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVF 199          
BLAST of EY658221 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.586e-11
Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 3
Query:  309 LGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANGGKFIINHGKISIAF 587
            LG RK +     PY W++Y++V + A   GSA+  +G  P      GI+  N PEW+   + C + ++  VPLYDTLG +   +I+N  ++S+ F
Sbjct:  110 LGSRKPNQ----PYEWISYKQVAEMAECIGSALIQKGFKPCSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIF 200          
The following BLAST results are available for this feature:
BLAST of EY658221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
FCSA_DICDI2.584e-1540.00Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]
ACSL1_CAVPO2.418e-1339.39Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
ACSL1_MOUSE1.568e-1237.37Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
ACSL5_RAT7.780e-1239.18Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norv... [more]
ACSL1_HUMAN2.956e-1136.36Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]
ACSL1_RAT6.586e-1135.79Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-134-H06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY658221 ID=EY658221; Name=EY658221; organism=Citrus sinensis; type=EST; length=989bp
CCCACGCGTCCGACCAAACCCACCTCCCATCTTCTCTTGCTCTCTCATTT
TTGTGTTAAATTCAACAAATTACTCTAAAAGCTTATTAGCTGCATAATTT
CTCGCATATTTTGTTGGTGGCAACAATGTCTGAGACCTATACTGTCAAAG
TTGAAGAAGCAAGGCCTGCTGCCGATGGCAAGCCGTCGGCCGGCCCGGTT
TATCGGTGCATTTATGCGAAAGATGGGTTACTAGAGTCACCGGTCGGTTT
GGAGTCTCCATGGCAGTTTTTTTGTGATTCTGCCAAAAGGATTCCAAATA
ACCAAATGCTGGGTCGACGCAAAGTCAGTGACGGAAAGGTTGGTCCTTAT
GTGTGGCTCACATACCAAGAGGTCTATGATGCTGCGATTCGTTTCGGTTC
CGCCATGAGGAGCCGTGGTGTCAATCCTGGAGATCGTTGCGGTATTTATG
GATCTAATTGCCCTGAATGGATTATAGCTATGGAGGCTTGTAATAGCCAG
GCCATAACGTATGTACCACTATATGACACCCTAGGTGCTAATGGGGGGAA
GTTCATCATCAATCATGGCAAAATTTCAATAGCTTTTGGTTCAGGAAAAA
AAAATCCCCTTCATTTCTATCTTGGCTTCCACAGGTGTTGTTTGGACTTT
AAAAACTATTGGCCGCTTTTGCAATGGTTTCTAGCCCCAAAAAAAAGGAA
ACCGAAAAAAATTGGGGGTCCCTTGTTTTTCTTGGGGGGAAATTTTTAAA
TTTGGGAAACTCTGGGATGTGAAACTCTCCCCCAAAAAAAAAAAAAACCA
TTTTTCCCACAAAAAAGGGTAAAAAAAGGGGAAAAACAAGGGGAAACCTA
AAGGGGGGGGTCTTTCTCCCCCAATCCCGGGGTTTTTTGTTGAGAAAAAA
AATAAAAAAGATGGGTGCCCCACCAAAAGTTGTTTGGGGGGTGGTTTAGG
GGCAAAAAAGGGGGGGGGGTTTTTCATATAAAGAAAAAA
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