EY675927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675927 vs. ExPASy Swiss-Prot
Match: PSAG_ARATH (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 8.611e-52 Identity = 104/152 (68.42%), Postives = 125/152 (82.24%), Query Frame = 1 Query: 115 ASSSLFTPSTITVRKHQISPSSISFQGLRPLNTR-AKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVWLYIVDVLAWGSIGHIVAYYILATFSNGYE 567 ++S+L +P+T + +P+SISF GLRPL + + LPKL+T+ +++S ++AEL+ +VISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG THFEAGD RAKEYVSLLKSNDP+ IVDVLAWGSIGHIVAYYILAT SNGY+ Sbjct: 4 SASALLSPTTFSTAISHKNPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYD 155
BLAST of EY675927 vs. ExPASy Swiss-Prot
Match: PSAG_SPIOL (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=PSAG PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.736e-42 Identity = 94/130 (72.31%), Postives = 104/130 (80.00%), Query Frame = 1 Query: 184 SFQGLRPL--NTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVWLYIVDVLAWGSIGHIVAYYILATFSNGYE 567 SF GLRPL N + L+ S+ R S +AEL+ LVISLSTGLSLFLGRFVFFNFQREN+AKQ +PEQNG++HFEAGD RAKEYVSLLKSNDPV IVDVLAWGSIGHIVAYYILAT SNGY+ Sbjct: 36 SFSGLRPLKLNISSNNSSSSLSMSSARRSMT-CRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQ-VPEQNGMSHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYD 163
BLAST of EY675927 vs. ExPASy Swiss-Prot
Match: PSAG_HORVU (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.072e-36 Identity = 83/134 (61.94%), Postives = 100/134 (74.63%), Query Frame = 1 Query: 166 ISPSSISFQGLRPLNTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVWLYIVDVLAWGSIGHIVAYYILATFSNGYE 567 +SP +++ L P + RA ++ A+R+ +A L +VISLSTGLSL +GRFVFFNFQRENVAKQ +PEQNG THFEAGD RAKE+ +LKSNDPV +VDVLAWGSIGHIVAYYILAT SNGY+ Sbjct: 9 LSPPAVAGLRLAP-SPRAAASFRGVSPPARRSV--AARAALEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWGSIGHIVAYYILATTSNGYD 138
BLAST of EY675927 vs. ExPASy Swiss-Prot
Match: PSAG_TORRU (Photosystem I reaction center subunit V, chloroplastic OS=Tortula ruralis GN=PSAG PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.135e-19 Identity = 48/92 (52.17%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 289 NTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVWLYIVDVLAWGSIGHIVAYYILATFSNGY 564 NT +IS ST L LGRFVF FQR V++ GLPEQNGV + + S+LK+NDP +VDVLAWG++GH V ++ILAT +NGY Sbjct: 17 NTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTNDPAGFTLVDVLAWGALGHAVGFFILATATNGY 108
BLAST of EY675927 vs. ExPASy Swiss-Prot
Match: PSAG_PEA (Photosystem I reaction center subunit V (Fragment) OS=Pisum sativum GN=PSAG PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 283 ELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 399 ELN LVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ Sbjct: 1 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 39 The following BLAST results are available for this feature:
BLAST of EY675927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675927 ID=EY675927; Name=EY675927; organism=Citrus sinensis; type=EST; length=893bpback to top |