EY675905

Overview
NameEY675905
Unique NameEY675905
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675905 vs. ExPASy Swiss-Prot
Match: RN157_XENLA (RING finger protein 157 OS=Xenopus laevis GN=rnf157 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.471e-27
Identity = 70/164 (42.68%), Postives = 100/164 (60.98%), Query Frame = 2
Query:   32 TITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGI-------GSTVAGDE-TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICR 496
            T+ F++G+ Q+F  P  T +D S + E  LT  ++ E+YP++V A     +         G+S + MA FEK  +G F V+ +KQ   V+ V Y LQEIYGI        S VA DE +D+  ECV+CLS+ RDT +LPCRH+C+C+ CA  L++Q + CPICR
Sbjct:  160 TVHFKRGVSQQFCFPSHT-VDPSEWREEELTFDLDREVYPMVVHAVVEEGEEH------LGHSHVLMATFEKHADGSFCVKPLKQKQVVDGVSYLLQEIYGIENKYNSQDSKVAEDELSDNSAECVVCLSDVRDTLILPCRHLCLCNACADTLRYQASNCPICR 316          
BLAST of EY675905 vs. ExPASy Swiss-Prot
Match: MGRN1_RAT (Probable E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.300e-27
Identity = 65/167 (38.92%), Postives = 102/167 (61.08%), Query Frame = 2
Query:   20 LKPLTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGIGS-----TVAGDE--TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICR 496
            L+  T+ +++G+ Q+F  P    ID S + +  L   ++  ++P++++A     D  E     TG++ + +A FEK  +G F V+ +KQ   V+RV Y LQEIYGI +     T   D+  +D+  ECV+CLS+ RDT +LPCRH+C+C+ CA  L++Q N CPICR
Sbjct:  157 LQSETVHYKRGVSQQFSLP-SFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEV----TGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 318          
BLAST of EY675905 vs. ExPASy Swiss-Prot
Match: MGRN1_MOUSE (Probable E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.300e-27
Identity = 65/167 (38.92%), Postives = 102/167 (61.08%), Query Frame = 2
Query:   20 LKPLTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGIGS-----TVAGDE--TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICR 496
            L+  T+ +++G+ Q+F  P    ID S + +  L   ++  ++P++++A     D  E     TG++ + +A FEK  +G F V+ +KQ   V+RV Y LQEIYGI +     T   D+  +D+  ECV+CLS+ RDT +LPCRH+C+C+ CA  L++Q N CPICR
Sbjct:  156 LQSETVHYKRGVSQQFSLP-SFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEV----TGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 317          
BLAST of EY675905 vs. ExPASy Swiss-Prot
Match: MGRN1_HUMAN (Probable E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.300e-27
Identity = 65/167 (38.92%), Postives = 102/167 (61.08%), Query Frame = 2
Query:   20 LKPLTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGIGS-----TVAGDE--TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICR 496
            L+  T+ +++G+ Q+F  P    ID S + +  L   ++  ++P++++A     D  E     TG++ + +A FEK  +G F V+ +KQ   V+RV Y LQEIYGI +     T   D+  +D+  ECV+CLS+ RDT +LPCRH+C+C+ CA  L++Q N CPICR
Sbjct:  156 LQSETVHYKRGVSQQFSLP-SFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEV----TGHAHVLLAAFEKHMDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 317          
BLAST of EY675905 vs. ExPASy Swiss-Prot
Match: RN157_HUMAN (RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=2 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.798e-25
Identity = 68/168 (40.48%), Postives = 99/168 (58.93%), Query Frame = 2
Query:   20 LKPLTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGI-------GSTVAGDE-TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICR 496
            L+  T+ +++G+ Q+F  P  T +D S + E  L   ++ E+YP++V A     D         G+  + +  FEK  +G F V+ +KQ   V+ V Y LQEIYGI        S VA DE +D+  ECV+CLS+ RDT +LPCRH+C+C+ CA  L++Q N CPICR
Sbjct:  156 LQSETVQYKRGVCQQFCLPSHT-VDPSEWAEEELGFDLDREVYPLVVHAVVDEGDEY------FGHCHVLLGTFEKHTDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICR 316          
BLAST of EY675905 vs. ExPASy Swiss-Prot
Match: MGRN1_DANRE (Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.798e-25
Identity = 60/163 (36.81%), Postives = 98/163 (60.12%), Query Frame = 2
Query:   32 TITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGIGS-------TVAGDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICR 496
            T+ +++G+ Q+F  P    ID + +    L   ++  ++P++V+A     D      + TG++ + +A FE+  +G F V+ +KQ   V+RV Y LQEIYGI +       +   + +D+  ECV+CLS+ RDT +LPCRH+C+C+ CA  L++Q N CPICR
Sbjct:  160 TVHYKRGINQQFSLP-SFKIDFTKWKPEELNFDLDKGVFPLVVQAIVDDGD------DVTGHAHVLLAAFERHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNACADTLRYQANNCPICR 315          
BLAST of EY675905 vs. ExPASy Swiss-Prot
Match: RN157_MOUSE (RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.232e-25
Identity = 67/168 (39.88%), Postives = 99/168 (58.93%), Query Frame = 2
Query:   20 LKPLTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGI-------GSTVAGDE-TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICR 496
            L+  T+ +++G+ Q+F  P  T +D S + E  L   ++ E+YP++V A     D         G+  + +  FEK  +G F V+ +KQ   V+ V Y LQEIYGI        S VA D+ +D+  ECV+CLS+ RDT +LPCRH+C+C+ CA  L++Q N CPICR
Sbjct:  156 LQSETVHYKRGVFQQFCLPSHT-VDPSEWAEEELGFDLDREVYPLVVHAVVDEGDEY------FGHCHVLLGTFEKHPDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDDVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICR 316          
The following BLAST results are available for this feature:
BLAST of EY675905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
RN157_XENLA1.471e-2742.68RING finger protein 157 OS=Xenopus laevis GN=rnf15... [more]
MGRN1_RAT7.300e-2738.92Probable E3 ubiquitin-protein ligase MGRN1 OS=Ratt... [more]
MGRN1_MOUSE7.300e-2738.92Probable E3 ubiquitin-protein ligase MGRN1 OS=Mus ... [more]
MGRN1_HUMAN7.300e-2738.92Probable E3 ubiquitin-protein ligase MGRN1 OS=Homo... [more]
RN157_HUMAN1.798e-2540.48RING finger protein 157 OS=Homo sapiens GN=RNF157 ... [more]
MGRN1_DANRE1.798e-2536.81Probable E3 ubiquitin-protein ligase MGRN1 OS=Dani... [more]
RN157_MOUSE5.232e-2539.88RING finger protein 157 OS=Mus musculus GN=Rnf157 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-D11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675905 ID=EY675905; Name=EY675905; organism=Citrus sinensis; type=EST; length=891bp
CACGCGTCCGGAAGAACTGCTTAAACCACTCACCATAACCTTCCAACAAG
GTCTTGGCCAGAAGTTTAGACAACCTTGTGGAACAGGGATTGACTTGTCA
ATGTTTGATGAGATAGCGTTAACTAAGGTGAATGCTGAAATTTATCCTAT
AATTGTGAGGGCTGAGGCACGCCCGGCAGATTCCAGCGAAGCAGAAGCAA
ATCCAACCGGGAATTCTCAAATTACTATGGCAGTGTTTGAAAAGAAAGAG
GAAGGTGGCTTCCATGTACAGGTAATTAAGCAGATCTTGTGGGTGAACAG
AGTGAGGTATGAGCTTCAGGAAATTTACGGAATTGGGAGTACAGTTGCTG
GTGATGAGACTGATTCTGGAAAAGAATGTGTCATCTGCTTGTCGGAACCA
CGGGACACAACGGTTCTCCCATGCCGACACATGTGCATGTGCAGTGAATG
TGCGAAGGTTTTGCAGTTCCAGACAAACCGGTGTCCAATTTGCAGGGCAA
CCGGTTGAGAGGCTGCTGGAAATTAAGGTGAATAATGCAACTGATGATTG
AGGACCGTCTCTGCTCCCCAATGATTGGCTTTTGTACTCGAAAAAAAAAG
GGAAAAAAAAAATTGTTGGGCCAAGGCTTTCCCTGGATAAATGGGTTTCG
GGGCGGTTCAAGAATTTACATATAAAAATTTCTTTTGAATTTTTTTTTGG
GGTTGGGGACCCTTGGGTCCAAAACCTTTTTCAAATTTTCTGGTTGGGTA
AACCCTGTCCAAGGAAATCCTTTTAATTTTTTTTTTTAAAAAAAAAAAAA
AAATTTTTTTGTTTTTTAAAAAAACAAAAAAAAAAAATTCCCCAAAAAAA
AAAAAAAAAAAAAAAAGGGGGGGGGGGGGCCCCCCCCCCTA
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