EY675897

Overview
NameEY675897
Unique NameEY675897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 2.203e-90
Identity = 157/191 (82.20%), Postives = 174/191 (91.10%), Query Frame = 1
Query:    7 MGRALRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQ 579
            MGR +RAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLARVTFRHPFR+ KQKELF+AAEGMYTGQF+YCGKKATL+VGNVLP+RSIPEGAVVCNVEHHVGDRGVLARASGDYA++I+HNPD+DTTR+KLPSG+KKI+PSGCRAM  G     GR + P  K G  YHK++
Sbjct:    1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAM-IGQVAGGGRTEKPMLKAGNAYHKYR 190          
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 2.436e-89
Identity = 154/191 (80.63%), Postives = 172/191 (90.05%), Query Frame = 1
Query:    7 MGRALRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQ 579
            MGR +RAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLARV FRHPFR+ KQKELF+AAEGMYTGQF+YCGKKATL+VGNVLP+RSIPEGAV+CNVEHHVGDRGV ARASGDYA++I+HNPDNDT+R+KLPSG+KKI+PSGCRAM  G     GR + P  K G  YHK++
Sbjct:    1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAM-IGQVAGGGRTEKPMLKAGNAYHKYR 190          
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 5.426e-89
Identity = 156/191 (81.68%), Postives = 169/191 (88.48%), Query Frame = 1
Query:    7 MGRALRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQ 579
            MGR +RAQRKGAGSVFKSHTHHRKGPA+FR+LDFGERNGYLKGV+ E+IHDPGRGAPLARVTFRHPFRY  QKELF+AAEGMYTGQFVYCGKKATLMVGNVLP+RSIPEGAVVCNVEH VGDRGV AR SGDYA++ISHNPDN TTRVKLPSGAKKI+PSGCRAM  G     GR + P  K G  YHK++
Sbjct:    1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAM-IGQVAGGGRTEKPMLKAGNAYHKYR 190          
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.930e-86
Identity = 152/191 (79.58%), Postives = 167/191 (87.43%), Query Frame = 1
Query:    7 MGRALRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQ 579
            MGR +RAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+ E+IHDPGRGAPLARVTFR+PFRY  QKELF+AAEGMYTGQFVYCGKKATLMVGNVLP+RSIPEGAVVCNVEH VGDRGV AR SG YA++ISHNPDN TTR+KLPSG+KKI+PSGCR M  G     GR + P  K G  YHK++
Sbjct:    1 MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRM-IGQVAGGGRTEKPMLKAGNAYHKYR 190          
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2)

HSP 1 Score: 313.923 bits (803), Expect = 8.109e-85
Identity = 150/193 (77.72%), Postives = 171/193 (88.60%), Query Frame = 1
Query:    7 MGRALRAQRKGA-GSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQS 582
            MGR +RAQRKGA GSVFKSHTHHRKGPA+FRSLD+GERNGYLKG+V EIIHDPGRGAPLARV FRHPFRYMKQKELF+AAEGMYTGQ++YCGKKA LMVGNVLP+ SIPEGAV+CNVE HVGDRG LARASGDYA++I+HNP+++TTRVKLPSG+KKI+PS CRAM  G     GR + PF K G  YHK+++
Sbjct:    1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAM-IGQVAGGGRTEKPFLKAGNAYHKYKA 192          
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3)

HSP 1 Score: 254.218 bits (648), Expect = 7.625e-67
Identity = 121/192 (63.02%), Postives = 150/192 (78.12%), Query Frame = 1
Query:    7 MGRALRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQS 582
            MGR +R QRKGAGSVFK+H  HRKG A+ R++DF ERNGY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELF+AAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC VE   GDRG LARASG+YA +ISHNP+   TRVKLPSG+KK+I S  RA+  G     GR+  P  K G  YHK+++
Sbjct:    1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAI-VGVVAGGGRIDKPILKAGRAYHKYKA 191          
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.218e-66
Identity = 123/191 (64.40%), Postives = 148/191 (77.49%), Query Frame = 1
Query:    7 MGRALRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQ 579
            MGR +RAQRKGAGSVF SHT  RKG  + RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V FR P+++  +KELFIA EG+YTGQFVYCGKKATL VGNV+PV ++PEG +VCN+E  +GDRG LARASG++A +I HNPD   TRVKLPSGAKK++PS  R M  G     GR+  P  K G  YHK++
Sbjct:    1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGM-VGIVAGGGRIDKPILKAGRAYHKYK 190          
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.218e-66
Identity = 123/191 (64.40%), Postives = 148/191 (77.49%), Query Frame = 1
Query:    7 MGRALRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQ 579
            MGR +RAQRKGAGSVF SHT  RKG  + RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V FR P+++  +KELFIA EG+YTGQFVYCGKKATL VGNV+PV ++PEG +VCN+E  +GDRG LARASG++A +I HNPD   TRVKLPSGAKK++PS  R M  G     GR+  P  K G  YHK++
Sbjct:    1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGM-VGIVAGGGRIDKPILKAGRAYHKYK 190          
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.218e-66
Identity = 121/191 (63.35%), Postives = 147/191 (76.96%), Query Frame = 1
Query:    7 MGRALRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQ 579
            MGR +RAQRKGAGSVFK+H   RKG A+ RSLDF ER+GY++GVV +IIHDPGRGAPLA V FR P+RY  +KELFIA EGM+TGQFVYCG+KATL +GNV+P+  +PEG ++CN+E   GDRG LAR SG+YA +I+HN D   TRVKLPSGAKK++PS  RAM  G     GR+  P  K G  YHK++
Sbjct:    1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAM-VGIVAGGGRIDKPILKAGRAYHKYK 190          
BLAST of EY675897 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3)

HSP 1 Score: 251.906 bits (642), Expect = 3.784e-66
Identity = 120/192 (62.50%), Postives = 150/192 (78.12%), Query Frame = 1
Query:    7 MGRALRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMNWGSCRRKGRLKTPFSKLGMPYHKFQS 582
            MGR +R QRKGAGSVFK+H  HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELF+AAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC VE   GDRG LARASG+YA +ISHNP+   TRVKLPSG+KK+I S  RA+  G     GR+  P  K G  YHK+++
Sbjct:    1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAI-VGVVAGGGRIDKPILKAGRAYHKYKA 191          
The following BLAST results are available for this feature:
BLAST of EY675897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 423
Match NameE-valueIdentityDescription
RL81_ARATH2.203e-9082.2060S ribosomal protein L8-1 OS=Arabidopsis thaliana... [more]
RL83_ARATH2.436e-8980.6360S ribosomal protein L8-3 OS=Arabidopsis thaliana... [more]
RL8_SOLLC5.426e-8981.6860S ribosomal protein L8 OS=Solanum lycopersicum G... [more]
RL8_TOBAC1.930e-8679.5860S ribosomal protein L8 OS=Nicotiana tabacum GN=R... [more]
RL82_ARATH8.109e-8577.7260S ribosomal protein L8-2 OS=Arabidopsis thaliana... [more]
RL8_XENLA7.625e-6763.0260S ribosomal protein L8 OS=Xenopus laevis GN=rpl8... [more]
RL8_SPOFR2.218e-6664.4060S ribosomal protein L8 OS=Spodoptera frugiperda ... [more]
RL8_MAMBR2.218e-6664.4060S ribosomal protein L8 OS=Mamestra brassicae GN=... [more]
RL8_DROME2.218e-6663.3560S ribosomal protein L8 OS=Drosophila melanogaste... [more]
RL8_XENTR3.784e-6662.5060S ribosomal protein L8 OS=Xenopus tropicalis GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-D03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675897 ID=EY675897; Name=EY675897; organism=Citrus sinensis; type=EST; length=926bp
AAAGAAATGGGTCGTGCCCTTCGCGCACAGCGTAAGGGTGCAGGTTCGGT
CTTCAAGTCCCACACCCACCACCGTAAGGGTCCGGCCCAGTTCCGCAGCC
TCGACTTCGGTGAGCGTAATGGTTACCTCAAGGGTGTCGTCGCAGAGATT
ATTCACGATCCGGGTCGTGGTGCCCCGCTGGCCCGAGTTACCTTTCGTCA
CCCTTTTCGCTACATGAAACAAAAGGAGCTTTTCATTGCCGCCGAGGGTA
TGTACACGGGTCAGTTCGTGTACTGCGGCAAGAAAGCCACTCTGATGGTT
GGTAATGTGTTGCCCGTTAGATCTATCCCTGAAGGAGCTGTCGTTTGCAA
CGTTGAGCATCATGTTGGTGATCGCGGTGTTCTCGCTAGAGCTTCTGGTG
ATTATGCCGTTATCATCAGTCATAACCCCGATAATGACACCACCAGGGTC
AAGCTTCCATCTGGTGCCAAAAAGATTATTCCAAGTGGCTGCAGAGCTAT
GAATTGGGGCAGTTGCCGGCGGAAGGGAAGACTGAAAACCCCCTTCTCAA
AGCTGGGAATGCCTTACCACAAATTTCAAAGTGGAACCGAACCTGGCTGG
GGCCTAAAGGTGCGTGGGGGGGGCCCTGGAAACCAGTGGGAAGCCTTCCC
CATGGGAGGAAGGTAACCCCCCCCCACATTGGGTCCAGGCTAGCCCCGGT
TAGGGGGTGGTGGCCCCCCCCGGGCCAAAAGGGTTGGTTTTTATTGCACC
CCAGGAGGAATGGGGTGGGGCTCAAAAGAAAAAAACGGGCGCCCCCCTGG
GACCCCAAGGGCCGAAAAAGGGGTTTAAAATCCTTTTTGGGTGTTACCCC
AAAAATCCCCTCCCCCTTCTTCCCCCGGATTTTTGTGGATTTTTTTTTTT
TTTTTTCCCCGGGGGCGCCACCCCAT
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