EY675876

Overview
NameEY675876
Unique NameEY675876
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length987
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675876 vs. ExPASy Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.321e-11
Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 3 
Query:   69 NSSDRRRAIEELIKGQEMALQLRNLIHKSTKSGEGSKAMIINQDLVANILSSFTNSLSILKNGD--SDEASQVQEHTQLSSPCWEAYLKTEDSGESSKS-STVKDRRGCYKRRKCAESW--DRT*LYSDR*WPCMEEIWAKK*FSMPNFQGNYFRCTHKFDQGC 545
            N + + + + +L++G ++  QL+ L+   ++ G G       +DLVA IL  F N++S+L   +  S  +S        ++ C +   K EDSG+S K    VK +RGCYKR+K +E+   + T L     W      + +K      F  +YFRCTHK+ QGC
Sbjct:    4 NKAKKLKVMNQLVEGHDLTTQLQQLL---SQPGSGL------EDLVAKILVCFNNTISVLDTFEPISSSSSLAAVEGSQNASC-DNDGKFEDSGDSRKRLGPVKGKRGCYKRKKRSETCTIESTILEDAFSW----RKYGQKEILNAKFPRSYFRCTHKYTQGC 153
The following BLAST results are available for this feature:
BLAST of EY675876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRK70_ARATH1.321e-1132.32Probable WRKY transcription factor 70 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-B06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675876 ID=EY675876; Name=EY675876; organism=Citrus sinensis; type=EST; length=987bp
AAAGGGGGAAAAAAATCCCAATGAAAATGGAGGCCGGTCAGGCCACATCT
TCATCTTCTTGGCTAGAGAATTCATCAGATCGAAGAAGGGCCATAGAAGA
GCTTATCAAAGGCCAAGAAATGGCACTCCAGCTTCGAAATCTCATTCACA
AGTCCACAAAAAGTGGAGAAGGGTCAAAAGCGATGATCATCAACCAAGAT
CTCGTGGCAAATATACTGAGCTCATTTACAAACTCTCTTTCAATATTGAA
AAATGGTGACTCTGATGAAGCGTCCCAAGTTCAAGAACATACCCAATTGA
GCTCTCCTTGCTGGGAGGCTTATTTGAAGACGGAGGATTCAGGTGAAAGC
AGCAAGAGCTCAACCGTTAAAGACCGGAGAGGATGCTACAAGAGAAGAAA
GTGTGCGGAGTCATGGGACAGAACTTAGCTCTACTCTGACAGATGATGGC
CATGCATGGAGGAAATATGGGCAAAAAAGTGATTCTCAATGCCAAATTTC
CAAGGAAATTACTTCAGGTGCACTCATAAATTTGATCAAGGCTGCCCAAG
CAAGTAAGCCGGGTTCAAAGGATTCAAGAAGGAAACCTCCCCCTACCCCA
AAACAAACTTATTATGGGCCCGCCCCACTTGCAAAAAATTTGGATCAAGT
CCCCCCTCCACCGGAGGGCCAGAATTCAACCACAAGGGGATCCGGGGCCC
CAAGGGTTACGCTTTGGGGAGGGGCCCCCTTCCCCAAAAAAAAATTTTAA
ACCCCATTTTTTAACCTCATTTCCCCCACAAAAAAAAAGCGGGGGTCCAA
AAAAGGGGGAATTTGGGGGGCCTTTTTAACCAGAAAAGACCCTCCACAAC
ATACACCCCCCCCCTCTCGAGGGAAAAATTTTGTGGGGGCAAAATGGTCT
CTCCCCCGCCATTTTTTAAATAACAATAAAAAACAAACACAAAAAAAAAA
AAATTTTTTTTTTTCTCTGGGTATTAGGGGGTGGGGG
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