EY675869

Overview
NameEY675869
Unique NameEY675869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN9_MOUSE (Calpain-9 OS=Mus musculus GN=Capn9 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.037e-20
Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 2
Query:   80 GIVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVPQSK--DGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            G+++G  Y +  + +V+ H    KL+++RNPW  ++EWNGPWSDSSPEW      + K +  +   DG FWM+++DF+IHF  + +C + P  +  S   +W          RG +AGGC+++    W  NPQ +L  +  D
Sbjct:  249 GLIKGHAYTVTGLDQVNFHGQRIKLIRVRNPWG-QVEWNGPWSDSSPEWRSVDLEEQKRLGHTALDDGEFWMAFKDFKIHFDKVEICNLTPDALEDSALHRWEVTIHQGSWVRGSTAGGCRNFLDTFWT-NPQIKLSLTERD 388          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN9_RAT (Calpain-9 (Fragment) OS=Rattus norvegicus GN=Capn9 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.180e-19
Identity = 55/157 (35.03%), Postives = 88/157 (56.05%), Query Frame = 2
Query:   35 SSGESSRTP*KICFSGIVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVPQS--KDGIFWMSWQDFQIHFRSIYVCRVYPSEM--------RYSVH-GQW-RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            +S   +RTP      G+++G  Y +  + +V+ H    KL+++RNPW  ++EWNGPWSDSSPEW      + K +  +   DG FWM+++DF+ HF  + +C + P  +          ++H G W RG +AGGC+++    W  NPQ +L  +  D
Sbjct:  221 ASESEARTP-----LGLIKGHAYTVTGLDQVNFHGQRIKLIRVRNPWG-QVEWNGPWSDSSPEWRSVSLEEQKRLGHTALDDGEFWMAFEDFKTHFDKVEICNLTPDALEDNTLHKWEVTIHQGSWVRGSTAGGCRNFLDTFWT-NPQIKLSLTERD 370          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN_CAEEL (Calpain clp-1 OS=Caenorhabditis elegans GN=clp-1 PE=2 SV=4)

HSP 1 Score: 93.5893 bits (231), Expect = 1.704e-18
Identity = 57/151 (37.75%), Postives = 81/151 (53.64%), Query Frame = 2
Query:   77 SGIVEGPPYIILQVREVDGHK----LVQIRNPWANELEWNGPWSDSSPEW---TDRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEM----------------RYSVH-GQW-RGYSAGGCQDYA-SWNQNPQFRLRASGSD 451
            +G+V+G  Y I   R VDG      +++IRNPW NE EWNGPWSD+S EW    D +K  +  +    DG FWMS+ DF  +F  + +C + P  M                  + H G W R  +AGGC++Y  ++  NPQFR++ + SD
Sbjct:  521 NGLVKGHAYSITGCRIVDGPNGQTCILRIRNPWGNEQEWNGPWSDNSREWRSVPDSVKQDM-GLKFDHDGEFWMSFDDFMRNFEKMEICNLGPDVMDEVYQMTGVKAAGMVWAANTHDGAWVRNQTAGGCRNYINTFANNPQFRVQLTDSD 670          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN3_CHICK (Calpain-3 OS=Gallus gallus GN=CAPN3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.704e-18
Identity = 56/143 (39.16%), Postives = 82/143 (57.34%), Query Frame = 2
Query:   80 GIVEGPPYIILQVREV----DGHKLVQIRNPWANELEWNGPWSDSSPEWT---DRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMR--------YSVH-GQW-RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            G+V+G  Y +  V E     +  +LV++RNPW  ++EWNGPWSD S EW    +  K +L+H   ++DG FW+S +DF  HF  + +C + P  +          SV+ G+W RG SAGGC++Y    W  NPQ+RL+    D
Sbjct:  322 GLVKGHAYSVTAVEETTYKGEKMRLVRLRNPWG-QVEWNGPWSDKSEEWNFIDEEEKIRLQH-KIAEDGEFWISLEDFMRHFTKLEICNLTPDTLEADKLQTWTVSVNEGRWVRGCSAGGCRNYPDTFWT-NPQYRLKLLEED 461          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN8_MOUSE (Calpain-8 OS=Mus musculus GN=Capn8 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.105e-17
Identity = 54/140 (38.57%), Postives = 79/140 (56.43%), Query Frame = 2
Query:   83 IVEGPPYIILQVREVD----GHKLVQIRNPWANELEWNGPWSDSSPEWT--DRMKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYS---------VHGQW-RGYSAGGCQDY-ASWNQNPQFRLRASGSD 451
            +V+G  Y +  V EVD      KL+++RNPW  E+EW G WSDS+PEW   D  K K +   +++DG FWMS+ DF   F  + +C + P  +             +G+W RG +AGGCQ+Y A++  NPQF++     D
Sbjct:  258 LVKGHAYSVTGVEEVDFRGLPEKLIRLRNPWG-EVEWTGAWSDSAPEWNYIDPQK-KGELDKRAEDGEFWMSFSDFLKQFSRLEICNLSPDSLSSEEIHKWNLVLFNGRWTRGSTAGGCQNYPATYWTNPQFKIHLDEVD 395          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CANB_DROME (Calpain-B OS=Drosophila melanogaster GN=CalpB PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17
Identity = 49/150 (32.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:   80 GIVEGPPYIILQVREVDGHK--------LVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVPQS--KDGIFWMSWQDFQIHFRSIYVCRVYP----SEMRYSVHGQWR----------GYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            G++ G  Y I +V  +D           ++++RNPW N+ EW+GPWSDSSPEW    +H  + +  +  +DG FWMS+QDF  HF  + +C + P     + ++S   +W           G +AGGC+++    W+ NPQ+ +     D
Sbjct:  465 GLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWH-NPQYIISLEDPD 613          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CANA_DROME (Calpain-A OS=Drosophila melanogaster GN=CalpA PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17
Identity = 49/142 (34.51%), Postives = 74/142 (52.11%), Query Frame = 2
Query:   80 GIVEGPPYIILQVREVD--------GHKLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVPQS--KDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYS-------------VHGQWR-GYSAGGCQDYAS--WNQNPQF 427
            G++ G  Y I +V  +D           ++++RNPW NE EWNGPWSDSSPEW    + +   +  +  +DG FWMS+QDF  HF  + +C + P  +                  G+W  G +AGGC+++    W+ NPQ+
Sbjct:  294 GLIRGHAYSITKVCLIDIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWH-NPQY 434          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN9_HUMAN (Calpain-9 OS=Homo sapiens GN=CAPN9 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17
Identity = 56/158 (35.44%), Postives = 87/158 (55.06%), Query Frame = 2
Query:   35 SSGES-SRTP*KICFSGIVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVPQSK--DGIFWMSWQDFQIHFRSIYVCRVYPSEM--------RYSVH-GQW-RGYSAGGCQDYAS--WNQNPQFRLRASGSD 451
            S+ ES +RTP      G+++G  Y +  + +V       +L++IRNPW  ++EWNG WSDSSPEW      + K +  +   DG FWM+++DF+ HF  + +C + P  +          +VH G W RG +AGGC+++    W  NPQ +L  +  D
Sbjct:  238 SAAESEARTP-----FGLIKGHAYSVTGIDQVSFRGQRIELIRIRNPWG-QVEWNGSWSDSSPEWRSVGPAEQKRLCHTALDDGEFWMAFKDFKAHFDKVEICNLTPDALEEDAIHKWEVTVHQGSWVRGSTAGGCRNFLDTFWT-NPQIKLSLTEKD 388          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN1_MOUSE (Calpain-1 catalytic subunit OS=Mus musculus GN=Capn1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.352e-17
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 2
Query:   68 ICFSGIVEGPPYIILQVREV--DGHK--LVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHV-PQSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDY-ASWNQNPQFRLRASGSDASFAY 466
            I F  +V G  Y +   ++V   G +  L+++RNPW  E+EW GPWSDSS EW     ++ + +  + +DG FWMS++DF   F  + +C + P  ++      W          RG +AGGC++Y A++  NPQF++R    D +  Y
Sbjct:  263 ITFKNLVRGHAYSVTGAKQVTYQGQRVNLIRMRNPWG-EVEWKGPWSDSSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDY 410          
BLAST of EY675869 vs. ExPASy Swiss-Prot
Match: CAN1_MACFA (Calpain-1 catalytic subunit OS=Macaca fascicularis GN=CAPN1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.352e-17
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 2
Query:   68 ICFSGIVEGPPYIILQVREVDGH----KLVQIRNPWANELEWNGPWSDSSPEWTDRMKHKLKHVP-QSKDGIFWMSWQDFQIHFRSIYVCRVYPSEMRYSVHGQW----------RGYSAGGCQDY-ASWNQNPQFRLRASGSD 451
            I F  +V+G  Y +   ++V+       L+++RNPW  E+EW G WSDSS EW     ++ + +  + +DG FWMS++DF   F  + +C + P  ++     +W          RG +AGGC++Y A++  NPQF++R   +D
Sbjct:  263 ITFKKLVKGHAYSVTGAKQVNYRGQMVNLIRMRNPWG-EVEWTGAWSDSSSEWNSVDPYEREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKSRTIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLDETD 405          
The following BLAST results are available for this feature:
BLAST of EY675869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CAN9_MOUSE9.037e-2035.92Calpain-9 OS=Mus musculus GN=Capn9 PE=2 SV=1[more]
CAN9_RAT1.180e-1935.03Calpain-9 (Fragment) OS=Rattus norvegicus GN=Capn9... [more]
CAN_CAEEL1.704e-1837.75Calpain clp-1 OS=Caenorhabditis elegans GN=clp-1 P... [more]
CAN3_CHICK1.704e-1839.16Calpain-3 OS=Gallus gallus GN=CAPN3 PE=2 SV=1[more]
CAN8_MOUSE1.105e-1738.57Calpain-8 OS=Mus musculus GN=Capn8 PE=1 SV=1[more]
CANB_DROME5.483e-1732.67Calpain-B OS=Drosophila melanogaster GN=CalpB PE=1... [more]
CANA_DROME5.483e-1734.51Calpain-A OS=Drosophila melanogaster GN=CalpA PE=1... [more]
CAN9_HUMAN5.483e-1735.44Calpain-9 OS=Homo sapiens GN=CAPN9 PE=1 SV=1[more]
CAN1_MOUSE9.352e-1734.23Calpain-1 catalytic subunit OS=Mus musculus GN=Cap... [more]
CAN1_MACFA9.352e-1733.33Calpain-1 catalytic subunit OS=Macaca fascicularis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-016-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675869 ID=EY675869; Name=EY675869; organism=Citrus sinensis; type=EST; length=919bp
TCCGGGTCGGGTCCGGGATTCCCGGGTCGACCCCTCGTCCGGGGAGTCCT
CACGCACCCCTTAAAAGATTTGTTTTAGTGGTATAGTGGAAGGCCCCCCC
TATATAATTCTACAGGTGAGGGAGGTGGATGGCCACAAGCTTGTTCAAAT
TCGAAATCCATGGGCTAATGAACTTGAATGGAATGGCCCCTGGTCTGATT
CGTCACCTGAATGGACTGACAGGATGAAACACAAGCTAAAACATGTTCCG
CAGTCAAAAGATGGTATATTCTGGATGTCCTGGCAAGATTTTCAGATTCA
CTTTCGATCAATATATGTCTGCCGTGTTTATCCGTCCGAGATGCGCTATT
CTGTGCACGGCCAATGGCGTGGTTACAGTGCAGGTGGTTGCCAAGATTAT
GCTTCATGGAATCAAAATCCTCAGTTCCGATTGAGGGCCTCTGGATCGGA
TGCATCATTTGCCTATTCATGTTTTCATTACCTTGACCCAAGGTGTGAGT
TTCCCAAGAAAGGTTGGTGGGTTTTAAAAATTATCAATCCAGTCACGAAT
CTATGAAGTTCCTATATTGGGAAGAAGAAACCGAAAAATCGGGGGCGCCC
GGCTCCTCACAATTTTACCCACTTAATCCAGTTGTGGGAACAAATATTTA
AATTCCCCGGGAAATTTCTTGGGGAAAAGGGTACGGGATCCGAACCAAAG
GGCTACCCAAAATTGCCTAACACCCTAACACCCCTGGGGAAAAAACCACC
TTTTGTTTCTTTTTGGGTTTACCAAAAAAAAAAAATTATCCAGGAAAGCT
TTTATTAAAAAAGGGGTGGGGCTTCTTTATTTTAAATTTTTATAACCTTT
TGGGAATATTATAATGGGGGTTACAGAATAATTTTTGGGGGGGGTGCCTG
GGGAAAACCCCAATAAAAA
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