EY675801

Overview
NameEY675801
Unique NameEY675801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RAC1_LOTJA (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus GN=RAC1 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 7.364e-81
Identity = 150/177 (84.75%), Postives = 162/177 (91.53%), Query Frame = 3
Query:  120 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+AKKWIPELRHYAPGVPIILVGTKLDLRDDK FLADHPGAVPIT AQG E+ K+     + ++CSSKT    +++ FDAAI+
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKHFLADHPGAVPITTAQGEELRKLIGAPAY-IECSSKTQQNVKAV-FDAAIK 175          
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RAC5_ORYSJ (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 1.256e-80
Identity = 150/177 (84.75%), Postives = 162/177 (91.53%), Query Frame = 3
Query:  120 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV+KKWIPELRHYAPGVPIILVGTKLDLRDDKQF  DHPGAVPI+ AQG E+ K+   + + ++CSSKT    +++ FDAAI+
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAY-IECSSKTQQNIKAV-FDAAIK 175          
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RAC5_ARATH (Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana GN=ARAC5 PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 3.655e-80
Identity = 149/177 (84.18%), Postives = 162/177 (91.53%), Query Frame = 3
Query:  120 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQF  DHPGAVPIT  QG E++K+    ++ ++CSSKT    +++ FDAAI+
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIY-IECSSKTQQNVKAV-FDAAIK 175          
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RAC6_ORYSJ (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica GN=RAC6 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 1.063e-79
Identity = 149/177 (84.18%), Postives = 159/177 (89.83%), Query Frame = 3
Query:  120 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV+KKWIPEL+HYAPGVPIILVGTKLDLRDDKQF  DHPGAVPIT AQG E+ K      + ++CSSKT    + + FDAAI+
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYY-IECSSKTQLNVKGV-FDAAIK 175          
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RHO1_PEA (Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 4.041e-79
Identity = 146/177 (82.49%), Postives = 161/177 (90.96%), Query Frame = 3
Query:  120 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPIILVGTKLDLRDDKQF  DHPGAVPIT AQG E+ K+     + ++CSSK+    +++ FDAAI+
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAY-IECSSKSQQNVKAV-FDAAIR 175          
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RAC4_ARATH (Rac-like GTP-binding protein ARAC4 OS=Arabidopsis thaliana GN=ARAC4 PE=1 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 4.041e-79
Identity = 146/175 (83.43%), Postives = 161/175 (92.00%), Query Frame = 3
Query:  126 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+AKKWIPELRHYAPGVPIILVGTKLDLRDDKQF  DHPGAVPIT  QG E++K+   +++ ++CSSKT    +++ FDAAI+
Sbjct:    2 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSAVY-IECSSKTQQNVKAV-FDAAIK 174          
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RAC3_ARATH (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 5.277e-79
Identity = 143/177 (80.79%), Postives = 163/177 (92.09%), Query Frame = 3
Query:  120 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVPIILVGTKLDLRDDKQF A+HPGAVPI+ AQG E++K+     + ++CS+KT    +++ FDAAI+
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAY-IECSAKTQQNVKAV-FDAAIK 175          
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RAC1_BETVU (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 9.002e-79
Identity = 145/177 (81.92%), Postives = 161/177 (90.96%), Query Frame = 3
Query:  120 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKLDLRDDKQF  DHPGAVPIT AQG E+ K+     + ++CSSKT    +++ FDAAI+
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAY-IECSSKTQQNVKAV-FDAAIK 175          
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RAC1_ARATH (Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana GN=ARAC1 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 9.002e-79
Identity = 145/177 (81.92%), Postives = 161/177 (90.96%), Query Frame = 3
Query:  120 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKLDLRDDKQF  DHPGAVPIT AQG E++K+     + ++CSSKT    + + FDAAI+
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAY-IECSSKTQENVKGV-FDAAIR 175          
BLAST of EY675801 vs. ExPASy Swiss-Prot
Match: RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 1.176e-78
Identity = 145/177 (81.92%), Postives = 160/177 (90.40%), Query Frame = 3
Query:  120 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITPAQGGEIEKVDRCSLFTLKCSSKTPTKCESLSFDAAIQ 650
            MSASRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKLDLRDDKQF  DHPGAVPIT AQG E+ K      + ++CSSKT    +++ FDAAI+
Sbjct:    1 MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTY-IECSSKTQENVKAV-FDAAIR 175          
The following BLAST results are available for this feature:
BLAST of EY675801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAC1_LOTJA7.364e-8184.75Rac-like GTP-binding protein RAC1 OS=Lotus japonic... [more]
RAC5_ORYSJ1.256e-8084.75Rac-like GTP-binding protein 5 OS=Oryza sativa sub... [more]
RAC5_ARATH3.655e-8084.18Rac-like GTP-binding protein ARAC5 OS=Arabidopsis ... [more]
RAC6_ORYSJ1.063e-7984.18Rac-like GTP-binding protein 6 OS=Oryza sativa sub... [more]
RHO1_PEA4.041e-7982.49Rac-like GTP-binding protein RHO1 OS=Pisum sativum... [more]
RAC4_ARATH4.041e-7983.43Rac-like GTP-binding protein ARAC4 OS=Arabidopsis ... [more]
RAC3_ARATH5.277e-7980.79Rac-like GTP-binding protein ARAC3 OS=Arabidopsis ... [more]
RAC1_BETVU9.002e-7981.92Rac-like GTP-binding protein RHO1 OS=Beta vulgaris... [more]
RAC1_ARATH9.002e-7981.92Rac-like GTP-binding protein ARAC1 OS=Arabidopsis ... [more]
RAC11_ARATH1.176e-7881.92Rac-like GTP-binding protein ARAC11 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-015-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675801 ID=EY675801; Name=EY675801; organism=Citrus sinensis; type=EST; length=949bp
CCCACGCGTCCGCTCTGCCCTTAAAAAATGCCGTACTTGTTCTGAGTTAG
GGTTCTGCAGCTGTAAAAACAAAGAAAGACGAGTAATAAAGATACTGTCT
TAAGTGCACGTGGCGCGAGATGAGTGCATCGAGGTTCATAAAGTGCGTGA
CGGTCGGTGACGGCGCCGTCGGCAAGACTTGCATGCTCATTTCTTACACC
AGCAACACTTTCCCGACGGATTATGTGCCAACAGTATTTGACAATTTCAG
TGCAAATGTGGTAGTGGATGGAAGCACTGTTAATCTTGGGTTGTGGGACA
CTGCAGGCCAGGAAGATTACAATAGACTAAGACCATTGAGCTACCGCGGG
GCAGATGTCTTCTTACTCGCATTCTCTCTCATTAGCAAGGCCAGCTATGA
AAATGTTGCTAAGAAATGGATTCCTGAGTTGAGGCATTATGCACCTGGTG
TTCCAATAATTCTTGTCGGGACGAAGCTCGATCTTCGGGATGATAAACAG
TTCCTTGCAGATCACCCTGGTGCAGTGCCAATTACCCCGGCCCAAGGGGG
AGAAATTGAGAAAGTTGATAGGTGCTCCCTGTTTACTTTGAAGTGTAGTT
CCAAAACACCAACAAAATGTGAAAGCCTGTCTTTTGATGCGGCCATTCAA
GGGGGGTTCCTCCGCCCGCCAAAAAAACAAAAAGAAAAAAAAAAAAAAAA
AGGCCCAAAAGGGGTTGGCCCCTATTTTTGGGATTTTCTTCAAAAACAAA
GATTTCTGGTGGAAAGGAAAACGGGGACCAATTTCAAAAATTTTTACCCC
AAAAATCTTTTACTTTCCTTTTGTTTTTTCCCCCCACACCCCTCCCCCGG
CCCCCCCAGGGGGAAAAAAAAACCAGGGGGGTTTTTTTGGGGGGCCCCCC
CAACTTTACCCCCCCCCTTTTTTAAAATGGGGGGCGTTTTTTTGTGAAA
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