EY675781

Overview
NameEY675781
Unique NameEY675781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: FA18_ARATH (Uncharacterized FAM18-like protein At1g09330 OS=Arabidopsis thaliana GN=At1g09330 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.622e-48
Identity = 112/171 (65.50%), Postives = 122/171 (71.35%), Query Frame = 3
Query:   81 QPPGENYANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWPILVDPLPFGCCLDCAWDIFS---H*VPS*LTPGCGCLVEPSTMQTLIGFTKWQKEAKKTNSTNFASQKIPS 584
            Q P ENYANP+TC FHVLFKGAALAFYILSALFF+SFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEIND+GESVWKFE LD ES+ARMNKKDSW +    L           +FS         L  G  CL     +  +IGFTK +K+AKK     FASQ I S
Sbjct:    8 QAPVENYANPRTCLFHVLFKGAALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSW-LFWWTLYLAAAAWFILGVFSLIRFQADYLLVVGV-CL--SLNVANIIGFTKCKKDAKK-QFQQFASQTIAS 173          
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: FA18_DROME (Uncharacterized FAM18-like protein CG5021 OS=Drosophila melanogaster GN=CG5021 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.768e-22
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 3
Query:   90 GENYANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHES-MARMNKKD 371
            G+ Y +P   FFH+ F+GAA+  Y+    F DSF+  FV  VL  + DFW VKN+SGR+LVGLRWWN ++D G S W FE  + ES  +R+NK +
Sbjct:   32 GQKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSESYQSRVNKNE 126          

HSP 2 Score: 23.483 bits (49), Expect = 1.768e-22
Identity = 13/39 (33.33%), Postives = 23/39 (58.97%), Query Frame = 1
Query:  379 LFWWTLYLSAVAWIVLGIFSL--IKFQAD*LLVVGVWLN 489
            +FW  L L  V W +  +F+L  +KF+   L+++ + LN
Sbjct:  129 IFWLGLILCPVFWGLFFLFALFGLKFKWLLLVMIAIALN 167          
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: TVP23_SCHPO (Golgi apparatus membrane protein tvp23 OS=Schizosaccharomyces pombe GN=tvp23 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.890e-21
Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 3
Query:   12 LDSQNSTLTRFKLRK*IRVPDLNQPPGENYANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFECLD 338
            +D QN+     + R   R+P + Q      ++P   FF +LF+  A+  YIL   F  SF+++F+V   L A+D W VKNVSGR+LVGLRW NE    GES+W FE  D
Sbjct:   20 MDYQNTETIAEQERNASRLPQMFQMS----SHPVALFFFLLFRTGAIVAYILGMFFTSSFMLLFIVIFTLLAVDLWTVKNVSGRLLVGLRWRNETGVDGESIWIFESAD 124          

HSP 2 Score: 35.039 bits (79), Expect = 1.890e-21
Identity = 15/33 (45.45%), Postives = 22/33 (66.67%), Query Frame = 1
Query:  382 FWWTLYLSAVAWIVLGIFSLIKFQAD*LLVVGV 480
            FW+ LYL    WI+LGI ++I+F+   L +V V
Sbjct:  137 FWYALYLYPFIWIILGIVAIIRFEFLWLALVAV 169          
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: FA18B_BOVIN (Protein FAM18B OS=Bos taurus GN=FAM18B PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.736e-19
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   78 NQPPGENYANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFE 329
            N+P      +P   FFH+ F+ +A+  Y+L  LF  SF+   V  +LL + DFW VKNV+GR++VGLRWWN I++ G+S W FE
Sbjct:   24 NRPKKSRIRHPVASFFHLFFRVSAIIVYLLCELFSSSFIACMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFE 107          

HSP 2 Score: 24.6386 bits (52), Expect = 4.736e-19
Identity = 11/32 (34.38%), Postives = 15/32 (46.88%), Query Frame = 1
Query:  379 LFWWTLYLSAVAWIVLGIFSLIKFQAD*LLVV 474
            +FW  L    V W+V    +L  F+   L VV
Sbjct:  126 IFWLGLVACPVLWVVFAFSALFSFRVKWLAVV 157          
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: FA18A_DICDI (Uncharacterized FAM18-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0276319 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.026e-18
Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 3
Query:   78 NQPPGENYANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWPILVDPLPFGCCLDCAWDIFS 440
            +QP      +P + FFH+ FK  A+A +ILS+     FV+ F++  L +A DFWV KNV+GR LVGLRWWN+I + G + W FE +  +S  ++N  +S    V  L F      AW +FS
Sbjct:   24 SQPQSNAPKHPISVFFHLFFKIVAVAIFILSSFVNIGFVLTFIIVTLSSAFDFWVTKNVTGRKLVGLRWWNQIKEDGTNNWVFESVQDKS--QVNPAESLMFWVPVLAF----TAAWFVFS 138          
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: TVP23_YARLI (Golgi apparatus membrane protein TVP23 OS=Yarrowia lipolytica GN=TVP23 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 3
Query:  102 ANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHESMAR-MNKKDSWPILVDPLPFGCCL 416
            ++P    F + F+  AL  Y+   LF D FV++FV+ VLL A DFW VKN++GR++VGLRWWNE ++ GESVW FE  D +     ++ K  W +L        CL
Sbjct:   11 SHPVALVFFLAFRLGALFTYMFGLLFTDKFVLMFVLVVLLLAADFWNVKNIAGRLMVGLRWWNEASETGESVWVFETADPQRYINPIDSKVFWMMLYGAPVLWVCL 116          
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: TVP23_LACBS (Golgi apparatus membrane protein TVP23 OS=Laccaria bicolor (strain S238N-H82) GN=TVP23 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.842e-18
Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 3
Query:  102 ANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFECLD 338
            A+P   FF  LF+ AA+A YIL   F D++V+  V  V+L A+DFW  +NVSGR LVGLR+WN++++ GES W FE  D
Sbjct:   86 AHPTALFFLYLFRIAAIAVYILCGWFTDNYVLSTVAVVVLLAMDFWNCRNVSGRTLVGLRFWNQVDEDGESYWVFESRD 164          

HSP 2 Score: 26.1794 bits (56), Expect = 3.842e-18
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 1
Query:  379 LFWWTLYLSAVAWIVLGIFSLIK 447
            +FW  LY+  + W VL I SL+K
Sbjct:  176 MFWIALYVFPLLWSVLLIVSLLK 198          
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: FA18B_MOUSE (Protein FAM18B OS=Mus musculus GN=Fam18b PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.876e-18
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 3
Query:   78 NQPPGENYANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFE 329
            N+P      +P   FFH+ F+ +A+  Y+L  L   SF+   V  +LL + DFW VKNV+GR++VGLRWWN I++ G+S W FE
Sbjct:   24 NRPRKSKIRHPVASFFHLFFRVSAVVVYLLCELLSSSFIACMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFE 107          

HSP 2 Score: 24.2534 bits (51), Expect = 3.876e-18
Identity = 10/32 (31.25%), Postives = 15/32 (46.88%), Query Frame = 1
Query:  379 LFWWTLYLSAVAWIVLGIFSLIKFQAD*LLVV 474
            +FW  L    V W++    +L  F+   L VV
Sbjct:  126 IFWLGLIACPVLWVIFAFSALFSFRVKWLAVV 157          
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: FA18B_PONAB (Protein FAM18B OS=Pongo abelii GN=FAM18B PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.040e-18
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 3
Query:   78 NQPPGENYANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFE 329
            N+P      +P   FFH+ F+ +A+  Y+L  L   SF+   V  +LL + DFW VKNV+GR++VGLRWWN I++ G+S W FE
Sbjct:   24 NRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFE 107          

HSP 2 Score: 24.2534 bits (51), Expect = 5.040e-18
Identity = 10/32 (31.25%), Postives = 15/32 (46.88%), Query Frame = 1
Query:  379 LFWWTLYLSAVAWIVLGIFSLIKFQAD*LLVV 474
            +FW  L    V W++    +L  F+   L VV
Sbjct:  126 IFWLGLIACPVLWVIFAFSALFSFRVKWLAVV 157          
BLAST of EY675781 vs. ExPASy Swiss-Prot
Match: FA18B_HUMAN (Protein FAM18B OS=Homo sapiens GN=FAM18B PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.040e-18
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 3
Query:   78 NQPPGENYANPKTCFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDMGESVWKFE 329
            N+P      +P   FFH+ F+ +A+  Y+L  L   SF+   V  +LL + DFW VKNV+GR++VGLRWWN I++ G+S W FE
Sbjct:   24 NRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFE 107          

HSP 2 Score: 24.2534 bits (51), Expect = 5.040e-18
Identity = 10/32 (31.25%), Postives = 15/32 (46.88%), Query Frame = 1
Query:  379 LFWWTLYLSAVAWIVLGIFSLIKFQAD*LLVV 474
            +FW  L    V W++    +L  F+   L VV
Sbjct:  126 IFWLGLIACPVLWVIFAFSALFSFRVKWLAVV 157          
The following BLAST results are available for this feature:
BLAST of EY675781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
FA18_ARATH1.622e-4865.50Uncharacterized FAM18-like protein At1g09330 OS=Ar... [more]
FA18_DROME1.768e-2249.47Uncharacterized FAM18-like protein CG5021 OS=Droso... [more]
TVP23_SCHPO1.890e-2143.12Golgi apparatus membrane protein tvp23 OS=Schizosa... [more]
FA18B_BOVIN4.736e-1946.43Protein FAM18B OS=Bos taurus GN=FAM18B PE=2 SV=1[more]
FA18A_DICDI1.026e-1841.32Uncharacterized FAM18-like protein 1 OS=Dictyostel... [more]
TVP23_YARLI2.285e-1843.40Golgi apparatus membrane protein TVP23 OS=Yarrowia... [more]
TVP23_LACBS3.842e-1851.90Golgi apparatus membrane protein TVP23 OS=Laccaria... [more]
FA18B_MOUSE3.876e-1845.24Protein FAM18B OS=Mus musculus GN=Fam18b PE=1 SV=1[more]
FA18B_PONAB5.040e-1845.24Protein FAM18B OS=Pongo abelii GN=FAM18B PE=2 SV=1[more]
FA18B_HUMAN5.040e-1845.24Protein FAM18B OS=Homo sapiens GN=FAM18B PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-015-A06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675781 ID=EY675781; Name=EY675781; organism=Citrus sinensis; type=EST; length=936bp
CCACGCGTCCGCTCGACTCTCAAAATTCCACTTTAACAAGATTTAAATTG
CGAAAATAGATTCGCGTACCCGATCTCAATCAGCCTCCTGGTGAAAATTA
TGCGAACCCAAAGACATGCTTCTTTCATGTTCTCTTCAAGGGTGCAGCTT
TGGCATTTTACATACTTTCTGCCCTCTTTTTCGACAGCTTTGTCATCATT
TTTGTGGTGACTGTCCTTCTTGCTGCTCTTGATTTTTGGGTAGTCAAGAA
TGTTAGTGGGCGTATCTTAGTTGGTTTGAGGTGGTGGAATGAAATAAATG
ATATGGGTGAGAGTGTGTGGAAGTTTGAGTGCCTTGACCATGAATCCATG
GCTCGCATGAACAAGAAAGATTCCTGGCCTATTCTGGTGGACCCTTTACC
TTTCGGCTGTTGCTTGGATTGTGCTTGGGATATTTTCTCTCATTAAGTTC
CAAGCTGATTAACTCCTGGTTGTGGGTGTCTGGTTGAACCCTCGACTATG
CAAACATTAATTGGTTTTACCAAATGGCAAAAAGAAGCGAAAAAAACAAA
TTCAACAAATTTTGCCTCCCAAAAAATCCCATCCCCAATTACCGTCCACA
CATACCGTCCGCCTTTACAGTTTGGCAGGAATCACATAAAAAAAACCTGG
TGGAAAAGGGGAAACATTATACCTATGTCGCGGATAAAAATGTTTGGAAA
AAGGTACGGAGACCTATTAAAAACAAGTGACGAAGAAAAAAGGAAATATT
TTAAGAAACAAAGAAGGAGAAAAAAAAATGTATAAAAAAAAATTTATAAA
AAACGTATATAAAAATAAATCAAGGAGCATCCAATCAAAAAACCGAAAAA
CCAATAGAAAAAAACAATACCTAAATGAGAACAAACACAAAAAAGAGGAG
AAGACTACATAGCACCAACAACCATAAAAGGACGAC
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