EY675760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AV1_ARATH (Histone H2A variant 1 OS=Arabidopsis thaliana GN=H2AV PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.176e-49 Identity = 102/116 (87.93%), Postives = 107/116 (92.24%), Query Frame = 3 Query: 249 NKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINK 596 NKDKDKDKK+PISRS+RAGIQFPVGRIHR LK+R++AHGRVGATAAVY ASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG IAG G P HKSLINK Sbjct: 18 NKDKDKDKKKPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPH-IHKSLINK 132
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AV1_ORYSJ (Probable histone H2A variant 1 OS=Oryza sativa subsp. japonica GN=Os03g0162200 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 2.075e-46 Identity = 99/115 (86.09%), Postives = 104/115 (90.43%), Query Frame = 3 Query: 255 DKDKDKKR-PISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINK 596 DKDKDKK+ P+SRSSRAG+QFPVGRIHR LKSR +AHGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG IAG G P HKSLINK Sbjct: 21 DKDKDKKKAPVSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPH-IHKSLINK 134
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AV3_ARATH (Probable histone H2A variant 3 OS=Arabidopsis thaliana GN=At1g52740 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.710e-46 Identity = 96/115 (83.48%), Postives = 104/115 (90.43%), Query Frame = 3 Query: 255 DKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINKN 599 DKDKDKK+PI+RSSRAG+QFPVGR+HR LK+R AHGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRI+PRHLQLAIRGDEELDTLIKG IAG G P HKSLINK+ Sbjct: 18 DKDKDKKKPITRSSRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEELDTLIKGTIAGGGVIPH-IHKSLINKS 131
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AV2_ORYSJ (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica GN=Os10g0418000 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.345e-45 Identity = 97/115 (84.35%), Postives = 104/115 (90.43%), Query Frame = 3 Query: 255 DKDKDKKR-PISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINK 596 DKDKD+K+ P+SRSSRAGIQFPVGRIHR LK R++A+GRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG IAG G P HKSLINK Sbjct: 22 DKDKDRKKAPVSRSSRAGIQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPH-IHKSLINK 135
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AV2_ARATH (Probable histone H2A variant 2 OS=Arabidopsis thaliana GN=At2g38810 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 2.294e-45 Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 3 Query: 255 DKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINK 596 +KD KK+ ISRSSRAGIQFPVGRIHR LK R++AHGRVGATAAVY ASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG IAG G P HKSL+NK Sbjct: 20 NKDSVKKKSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPH-IHKSLVNK 132
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AV3_ORYSJ (Probable histone H2A variant 3 OS=Oryza sativa subsp. japonica GN=Os03g0743400 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 8.719e-45 Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 3 Query: 255 DKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINKN 599 +KDK KK P+SRSSRAG+QFPVGRIHR LK R A+GRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG IAG G P HKSLINK+ Sbjct: 21 EKDKGKKAPVSRSSRAGLQFPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPH-IHKSLINKS 134
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AZ_CHICK (Histone H2A.Z OS=Gallus gallus GN=H2AFZ PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 4.784e-43 Identity = 92/119 (77.31%), Postives = 99/119 (83.19%), Query Frame = 3 Query: 252 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINKNYQK 608 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK IAG G P HKSLI K Q+ Sbjct: 8 KDSGKTKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPH-IHKSLIGKKGQQ 125
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AV_RABIT (Histone H2A.V OS=Oryctolagus cuniculus GN=H2AFV PE=2 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 4.784e-43 Identity = 91/122 (74.59%), Postives = 101/122 (82.79%), Query Frame = 3 Query: 252 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINKNYQKMSS 617 KD K K + +SRS RAG+QFPVGRIHRHLK+R +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK IAG G P HKSLI K Q+ ++ Sbjct: 8 KDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGAIPH-IHKSLIGKKGQQKTA 128
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AZ_SHEEP (Histone H2A.Z OS=Ovis aries GN=H2AFZ PE=2 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 6.248e-43 Identity = 92/119 (77.31%), Postives = 99/119 (83.19%), Query Frame = 3 Query: 252 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINKNYQK 608 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK IAG G P HKSLI K Q+ Sbjct: 8 KDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPH-IHKSLIGKKGQQ 125
BLAST of EY675760 vs. ExPASy Swiss-Prot
Match: H2AZ_RAT (Histone H2A.Z OS=Rattus norvegicus GN=H2afz PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 6.248e-43 Identity = 92/119 (77.31%), Postives = 99/119 (83.19%), Query Frame = 3 Query: 252 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGNIAGSGGDPSTFHKSLINKNYQK 608 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK IAG G P HKSLI K Q+ Sbjct: 8 KDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPH-IHKSLIGKKGQQ 125 The following BLAST results are available for this feature:
BLAST of EY675760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675760 ID=EY675760; Name=EY675760; organism=Citrus sinensis; type=EST; length=963bpback to top |