EY675753

Overview
NameEY675753
Unique NameEY675753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY675753_ssr374 microsatellite EY675753_ssr374:374..383. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY675753 vs. ExPASy Swiss-Prot
Match: GCS1_CAEEL (Probable mannosyl-oligosaccharide glucosidase OS=Caenorhabditis elegans GN=F13H10.4 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.240e-39
Identity = 73/138 (52.90%), Postives = 98/138 (71.01%), Query Frame = 2
Query:  113 GYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYYYSQVNGPYRERAEVIYDELRGDLIRNVVRNYHQTGFLWEH*DQKKVRGKGARLFTGWDS 526
            GY +LFP M K+IP  S IL   LD I +  ILWT+YGLRS++++S  YM  NTEHDPPYWRG IW+N+NY +L++L +Y+   GPYRE AE I+ ELR +L++N+   + +TGFLWE+ D +   G+G   FTGW S
Sbjct:  647 GYNNLFPMMLKLIPSKSPILKSMLDKIRDPKILWTNYGLRSISRSSPYYMARNTEHDPPYWRGYIWINVNYMVLSSLRHYADQPGPYRENAENIFSELRANLVKNLATQFQKTGFLWENYDDRTGEGRGCHPFTGWSS 784          
BLAST of EY675753 vs. ExPASy Swiss-Prot
Match: MOGS_HUMAN (Mannosyl-oligosaccharide glucosidase OS=Homo sapiens GN=MOGS PE=1 SV=5)

HSP 1 Score: 155.992 bits (393), Expect = 2.585e-37
Identity = 74/160 (46.25%), Postives = 106/160 (66.25%), Query Frame = 2
Query:   50 PARQLVREV-LEKPELRLVPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYYYSQVNGPYRERAEVIYDELRGDLIRNVVRNYHQTGFLWEH*DQKKVRGKGARLFTGWDS 526
            P + LVR V   +P+L+ V  +GYVSLFP + +++ P S  L   LD++++   LW+ +GLRSLA +SS Y + N+EHDPPYWRG +W+N+NY  L AL++Y  + GP++ RA  ++ ELR +++ NV R Y  TGFLWE    +  RG G R F GW S
Sbjct:  668 PPQGLVRVVGRPQPQLQYVDALGYVSLFPLLLRLLDPTSSRLGPLLDILADSRHLWSPFGLRSLAASSSFYGQRNSEHDPPYWRGAVWLNVNYLALGALHHYGHLEGPHQARAAKLHGELRANVVGNVWRQYQATGFLWEQYSDRDGRGMGCRPFHGWTS 827          
BLAST of EY675753 vs. ExPASy Swiss-Prot
Match: MOGS_MOUSE (Mannosyl-oligosaccharide glucosidase OS=Mus musculus GN=Mogs PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.410e-37
Identity = 74/160 (46.25%), Postives = 104/160 (65.00%), Query Frame = 2
Query:   50 PARQLVREV-LEKPELRLVPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYYYSQVNGPYRERAEVIYDELRGDLIRNVVRNYHQTGFLWEH*DQKKVRGKGARLFTGWDS 526
            P + LVR V    P L+ V  +GYVSLFP + +++ P S  L   LD++++   LW+ +GLRSL+ +S  Y + NTEHDPPYWRG +W+N+NY  L AL++Y  V GP++ +A  +Y ELR +++RNV + Y  TGFLWE    +  RG G R F GW S
Sbjct:  665 PPQGLVRVVGRPPPRLQYVDALGYVSLFPLLLQLLDPSSPRLGPLLDVLADSRHLWSPFGLRSLSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYGHVEGPHKVQAAKLYHELRANVVRNVRQQYQATGFLWEQYSDQDGRGMGCRPFQGWTS 824          
BLAST of EY675753 vs. ExPASy Swiss-Prot
Match: MOGS_RAT (Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus GN=Mogs PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.858e-36
Identity = 73/160 (45.62%), Postives = 104/160 (65.00%), Query Frame = 2
Query:   50 PARQLVREVLEKP-ELRLVPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYYYSQVNGPYRERAEVIYDELRGDLIRNVVRNYHQTGFLWEH*DQKKVRGKGARLFTGWDS 526
            P + LVR V   P  L+ V  +GYVSLFP + +++ P S  L   LD++++   LW+ +GLRSL+ +S  Y + NTEHDPPYWRG +W+N+NY  L AL++Y +V GP++ +A  +Y ELR +++ NV + Y  TGFLWE    +  RG G R F GW S
Sbjct:  665 PPQGLVRVVGRPPARLQYVDALGYVSLFPLLLQLLEPSSPRLGPLLDVLADSRHLWSPFGLRSLSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYGRVEGPHKVQAAKLYRELRANVVSNVRQQYQATGFLWEQYSDQDGRGMGCRPFQGWTS 824          
BLAST of EY675753 vs. ExPASy Swiss-Prot
Match: GCS1_SCHPO (Probable mannosyl-oligosaccharide glucosidase OS=Schizosaccharomyces pombe GN=SPAC6G10.09 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.270e-25
Identity = 61/143 (42.66%), Postives = 82/143 (57.34%), Query Frame = 2
Query:  101 VPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYY-YSQVNGPYRERAEVIYDELRGDLIRNVVRNYHQTGFLWEH*DQKKVRGKGARLFTGWDS 526
            V H GYV+L P M  ++P DS  L   L LI + + LW+ YG+RSL+     +          YWRGPIW+NMNY IL++LY  Y    GP +  A  IY+ELR +++ NV  N+ QTG  WE  D    +G+  + FTGW S
Sbjct:  661 VCHKGYVTLLPMMLGLLPADSGRLTSLLKLIRDENELWSPYGIRSLSMNDVYFGTGEN-----YWRGPIWINMNYLILSSLYQNYINTPGPNQNLARSIYEELRTNVVNNVFENWRQTGIFWEQYDPTTGKGQRTKDFTGWTS 798          
BLAST of EY675753 vs. ExPASy Swiss-Prot
Match: CWH41_YEAST (Mannosyl-oligosaccharide glucosidase OS=Saccharomyces cerevisiae GN=CWH41 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.861e-19
Identity = 58/152 (38.16%), Postives = 86/152 (56.58%), Query Frame = 2
Query:   80 EKPELR-LVPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAAL-YYYSQV---NGPYRERAEVIYDELRGDLIRNVVRNYHQTGFLWEH*DQKKVRGKGARLFTGW 520
            E  E+R  V H GYVS+ PF  K+IP +S  L+K + L+S+   +++DYGL SL++    + K     D  YWRGPIWMN+NY  L A+ YYY +V          A+ +Y  L+ +L  N+ + + + G+ +E+       G GA  FTGW
Sbjct:  676 EDDEIREFVCHEGYVSVLPFALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGK-----DENYWRGPIWMNINYLCLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGW 822          
The following BLAST results are available for this feature:
BLAST of EY675753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GCS1_CAEEL1.240e-3952.90Probable mannosyl-oligosaccharide glucosidase OS=C... [more]
MOGS_HUMAN2.585e-3746.25Mannosyl-oligosaccharide glucosidase OS=Homo sapie... [more]
MOGS_MOUSE4.410e-3746.25Mannosyl-oligosaccharide glucosidase OS=Mus muscul... [more]
MOGS_RAT2.858e-3645.63Mannosyl-oligosaccharide glucosidase OS=Rattus nor... [more]
GCS1_SCHPO2.270e-2542.66Probable mannosyl-oligosaccharide glucosidase OS=S... [more]
CWH41_YEAST1.861e-1938.16Mannosyl-oligosaccharide glucosidase OS=Saccharomy... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-014-G01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675753 ID=EY675753; Name=EY675753; organism=Citrus sinensis; type=EST; length=871bp
AGAAAAGGTTCGTTTACCTTGGAAAGAAATAAAGGTTGGAAATAATTATC
CAGCTAGACAGCTTGTTCGGGAAGTATTAGAAAAACCGGAGTTGAGGTTG
GTTCCTCACGTTGGTTATGTCAGCCTTTTTCCTTTTATGGAGAAGATCAT
TCCACCTGATTCATGGATCCTGGACAAACAGCTTGATCTTATTTCTAACA
GGAGCATCTTATGGACTGATTATGGACTCCGCTCACTTGCCAAAACAAGC
TCCTTGTACATGAAACACAACACAGAGCATGATCCACCTTATTGGAGAGG
TCCAATTTGGATGAACATGAACTATAGGATTCTTGCTGCACTCTATTATT
ACTCACAAGTGAATGGACCATACAGAGAGAGAGCAGAAGTCATCTATGAT
GAATTAAGGGGCGATCTGATTAGGAATGTGGTTCGCAACTACCATCAGAC
TGGGTTTCTGTGGGAACATTAAGATCAAAAAAAGGTAAGGGGAAAAGGCG
CACGTCTGTTCACTGGTTGGGACAGCCCTTGTGCTATTGATTTTGGGTGA
AATTTATGGGGAAAATTAAAATTCCAAGTTCAATATAAAAAAATTTTTTC
TAACAAAAAGGGAAACCCGTTTAATACTTCGGAACTTCTGAAAAAACCCA
TGGTCCCAAATTTTCTTTAAAATGGGGGAATTTTTTGGGCCCCCTTTTCT
GTTTCGAAAAAAGAAACAAAAACAAAGGAAAGAGACCAAAGCCATGCTCG
AAGACAAGTCGGGAATAAGGGAGAGAAAAAGATGAAAGACAGCGGGGGGG
GGCCCCCCCCAGAGGAAACACAAGCAAGAGACAAAGGGGGGATGGGGCGA
GAGGGGTATAGGGCTATGTAA
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