EY675737

Overview
NameEY675737
Unique NameEY675737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675737 vs. ExPASy Swiss-Prot
Match: YC20L_ARATH (Ycf20-like protein OS=Arabidopsis thaliana GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 7.076e-23
Identity = 64/112 (57.14%), Postives = 75/112 (66.96%), Query Frame = 2 
Query:  398 KRHGWKIAFALDTGG-ISGSGGQ-ESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKTLPMKIFLLLLGFHPANALATIL*QKGDWECTGCRGFNFLPLKG*GMP*LQKP 727
            +R   KIAFALDTG  I G  G+ + +NGD   LG TRLGRI  AGG+QLL K+N ARK  PMKIFLLLLGF+ ANALATIL Q GDW+     G     ++G GM   +KP
Sbjct:   51 RRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVL-VAGIVVAAIEGIGMLMYKKP 161
The following BLAST results are available for this feature:
BLAST of EY675737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YC20L_ARATH7.076e-2357.14Ycf20-like protein OS=Arabidopsis thaliana GN=At1g... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-014-E07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675737 ID=EY675737; Name=EY675737; organism=Citrus sinensis; type=EST; length=954bp
CCACGCGTCCGCCCACGCGTCCGCAAAATCTCAATTGTCAAGGATTCCAT
GGTTTGTGGGGGCAGTCTGGGATTGTGGATGAAATGTGGAACTGTTAAAC
ACTTGCCTGCTTGGACTTGATCGACATACTGCTTTGCTGGTGTTTGTTTT
AGTTGAGAGAAGCATTTGCTACATACAACTGGAATTTGAATCTTTTACAT
GATAAGGTTTATATGCTTGTAGCTGGCGTCAAATGGGAGCACTGCCATTG
CACTCAAGTTTGTTGATACTAGAGAGAGATGTCTTTGAAAGTTCTTATAT
AAGGCTTGCAGTTAGTGCAAACCAGAAGTGGAAAAATGAACCTAGTACAA
GTGGACAGACTTCAAAGATCGGTTCAAAGTCTGCTTGTTTTCTCGGAAAG
AGACATGGCTGGAAAATAGCATTTGCGTTGGACACAGGTGGAATATCTGG
GAGTGGTGGACAAGAGAGCCTCAATGGTGATGGTCCTGATCTTGGTGGCA
CTAGATTGGGAAGGATAGTTAGTGCAGGTGGTAGACAGCTACTGGAGAAG
CTGAACATAGCGAGAAAAACCCTTCCAATGAAGATATTTCTCCTGCTATT
GGGTTTTCACCCAGCAAATGCTCTAGCTACAATCCTTTGACAAAAAGGTG
ACTGGGAATGTACTGGTTGCAGGGGTTTTAATTTCCTGCCATTGAAGGGT
TAGGGTATGCCTTAGTTACAAAAACCCCCCCTTCCTTCAATTGGGAAGGC
CGCAATCCCTTTTTGGGGAAAAAAAAAAAATTTTGGAAAAACCCCGGGGG
GTTGCGTTTGGCCCTCTTTTTTGGGGAAGCTTTTTAAAAACGGGGGAAAA
ATTTAATTTTTCCCCCCTCACCAAATAAAAAAAAAAAATTAAAAAAAAAA
TGGGGTCGCAATTATCTCCCAAAAACACCCCCTCCCCCTTCTCCAGAGAG
GGGG
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